RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TYW1BQ6NUM6 668 aa15.54■□□□□ 0.08
NEK3-205ENST00000610828 RASGRP4Q8TDF6 673 aa15.54■□□□□ 0.08
NEK3-205ENST00000610828 CEP95Q96GE4 821 aa15.54■□□□□ 0.08
NEK3-205ENST00000610828 KLRF2D3W0D1 207 aa15.53■□□□□ 0.08
NEK3-205ENST00000610828 NT5DC1Q5TFE4 455 aa15.53■□□□□ 0.08
NEK3-205ENST00000610828 ZNF772Q68DY9 489 aaPredicted RBP15.53■□□□□ 0.08
NEK3-205ENST00000610828 WWC2Q6AWC2 1192 aa15.53■□□□□ 0.08
NEK3-205ENST00000610828 FLAD1Q8NFF5 587 aa15.53■□□□□ 0.08
NEK3-205ENST00000610828 ZNF622Q969S3 477 aaKnown RBP eCLIP15.53■□□□□ 0.08
NEK3-205ENST00000610828 MASTLQ96GX5 879 aa15.53■□□□□ 0.08
NEK3-205ENST00000610828 CCDC34Q96HJ3 373 aa15.53■□□□□ 0.08
NEK3-205ENST00000610828 HSD3B7Q9H2F3 369 aa15.53■□□□□ 0.08
NEK3-205ENST00000610828 CPVLQ9H3G5 476 aa15.53■□□□□ 0.08
NEK3-205ENST00000610828 SUGT1Q9Y2Z0 365 aa15.53■□□□□ 0.08
NEK3-205ENST00000610828 NRXN2Q9P2S2 1712 aa15.53■□□□□ 0.08
NEK3-205ENST00000610828 FANCCQ00597 558 aa15.53■□□□□ 0.08
NEK3-205ENST00000610828 UQCRHLA0A096LP55 91 aa15.52■□□□□ 0.08
NEK3-205ENST00000610828 NEMFO60524 1076 aa15.52■□□□□ 0.08
NEK3-205ENST00000610828 UQCRHP07919 91 aa15.52■□□□□ 0.08
NEK3-205ENST00000610828 PARP1P09874 1014 aaKnown RBP15.52■□□□□ 0.08
NEK3-205ENST00000610828 AFMP43652 599 aa15.52■□□□□ 0.08
NEK3-205ENST00000610828 SARSP49591 514 aaKnown RBP15.52■□□□□ 0.08
NEK3-205ENST00000610828 SCNN1DP51172 638 aa15.52■□□□□ 0.08
NEK3-205ENST00000610828 USP17L2Q6R6M4 530 aa15.52■□□□□ 0.08
NEK3-205ENST00000610828 CCDC148Q8NFR7 591 aa15.52■□□□□ 0.08
NEK3-205ENST00000610828 LZTS2Q9BRK4 669 aa15.52■□□□□ 0.08
NEK3-205ENST00000610828 CCDC194A0A1B0GVG4 234 aa15.51■□□□□ 0.07
NEK3-205ENST00000610828 SLFN14P0C7P3 912 aa15.51■□□□□ 0.07
NEK3-205ENST00000610828 TOP1P11387 765 aaKnown RBP15.51■□□□□ 0.07
NEK3-205ENST00000610828 TMC6Q7Z403 805 aa15.51■□□□□ 0.07
NEK3-205ENST00000610828 BARHL2Q9NY43 387 aa15.51■□□□□ 0.07
NEK3-205ENST00000610828 COL11A2P13942 1736 aaPredicted RBP15.51■□□□□ 0.07
NEK3-205ENST00000610828 STXBP3O00186 592 aa15.51■□□□□ 0.07
NEK3-205ENST00000610828 SERPINC1P01008 464 aa15.51■□□□□ 0.07
NEK3-205ENST00000610828 MORC3Q14149 939 aa15.51■□□□□ 0.07
NEK3-205ENST00000610828 HOMER1Q86YM7 354 aa15.51■□□□□ 0.07
NEK3-205ENST00000610828 DDX4Q9NQI0 724 aaKnown RBP15.51■□□□□ 0.07
NEK3-205ENST00000610828 FANCLQ9NW38 375 aa15.51■□□□□ 0.07
NEK3-205ENST00000610828 IMPACTQ9P2X3 320 aa15.51■□□□□ 0.07
NEK3-205ENST00000610828 FOCADQ5VW36 1801 aa15.51■□□□□ 0.07
NEK3-205ENST00000610828 SKILP12757 684 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 GSDMDP57764 484 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 TRIML1Q8N9V2 468 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 MLKLQ8NB16 471 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 SPZ1Q9BXG8 430 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 USP40Q9NVE5 1235 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 DACH1Q9UI36 760 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 UBASH3AP57075 661 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 SPATA20Q8TB22 786 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 PAGE5Q96GU1 130 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 OSBPL5Q9H0X9 879 aaPredicted RBP15.5■□□□□ 0.07
NEK3-205ENST00000610828 DBNDD1Q9H9R9 158 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 PCDHA6Q9UN73 950 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 PCDHA8Q9Y5H6 950 aa15.5■□□□□ 0.07
NEK3-205ENST00000610828 M0R2N6 131 aa15.49■□□□□ 0.07
NEK3-205ENST00000610828 CASP1P29466 404 aa15.49■□□□□ 0.07
NEK3-205ENST00000610828 IL17AQ16552 155 aa15.49■□□□□ 0.07
NEK3-205ENST00000610828 HSP90AA4PQ58FG1 418 aa15.49■□□□□ 0.07
NEK3-205ENST00000610828 VAT1LQ9HCJ6 419 aa15.49■□□□□ 0.07
NEK3-205ENST00000610828 NAPAP54920 295 aa15.49■□□□□ 0.07
NEK3-205ENST00000610828 GABPAQ06546 454 aa15.49■□□□□ 0.07
NEK3-205ENST00000610828 CFAP100Q494V2 611 aa15.49■□□□□ 0.07
NEK3-205ENST00000610828 GALNT17Q6IS24 598 aa15.49■□□□□ 0.07
NEK3-205ENST00000610828 TEKT1Q969V4 418 aa15.49■□□□□ 0.07
NEK3-205ENST00000610828 SEC63Q9UGP8 760 aaKnown RBP15.49■□□□□ 0.07
NEK3-205ENST00000610828 USP17L5A8MUK1 530 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 EIF6P56537 245 aaKnown RBP15.48■□□□□ 0.07
NEK3-205ENST00000610828 CCZ1BP86790 482 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 CCZ1P86791 482 aaPredicted RBP15.48■□□□□ 0.07
NEK3-205ENST00000610828 FMR1Q06787 632 aaKnown RBP eCLIP15.48■□□□□ 0.07
NEK3-205ENST00000610828 INF2Q27J81 1249 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 ARL6IP4Q66PJ3 421 aaKnown RBP15.48■□□□□ 0.07
NEK3-205ENST00000610828 C2CD5Q86YS7 1000 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 DAGLBQ8NCG7 672 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 DPF2Q92785 391 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 RRP36Q96EU6 259 aaKnown RBP15.48■□□□□ 0.07
NEK3-205ENST00000610828 PRIMPOLQ96LW4 560 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 C16orf45Q96MC5 204 aaPredicted RBP15.48■□□□□ 0.07
NEK3-205ENST00000610828 MTMR4Q9NYA4 1195 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 SERPINB13Q9UIV8 391 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 CBFA2T2O43439 604 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 AKR1B1P15121 316 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 CDC42EP5Q6NZY7 148 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 SH3RF1Q7Z6J0 888 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 TRMT44Q8IYL2 757 aaKnown RBP15.48■□□□□ 0.07
NEK3-205ENST00000610828 IQUBQ8NA54 791 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 CCDC12Q8WUD4 166 aaPredicted RBP15.48■□□□□ 0.07
NEK3-205ENST00000610828 STAMQ92783 540 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 KCNQ5Q9NR82 932 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 ZNF219Q9P2Y4 722 aaPredicted RBP15.48■□□□□ 0.07
NEK3-205ENST00000610828 NFE2L3Q9Y4A8 694 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 QSER1Q2KHR3 1735 aa15.48■□□□□ 0.07
NEK3-205ENST00000610828 NOVP48745 357 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 HHIPL2Q6UWX4 724 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 CLEC10AQ8IUN9 316 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 LRRC47Q8N1G4 583 aaKnown RBP15.47■□□□□ 0.07
NEK3-205ENST00000610828 C4orf32Q8N8J7 132 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 UBA5Q9GZZ9 404 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 ZMYND12Q9H0C1 365 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 ADAMTSL1Q8N6G6 1762 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms