RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 F5H6K3 240 aa22.8■■□□□ 1.24
CTSA-217ENST00000607482 STRNO43815 780 aa22.8■■□□□ 1.24
CTSA-217ENST00000607482 ERCC3P19447 782 aa22.8■■□□□ 1.24
CTSA-217ENST00000607482 KLRC3Q07444 240 aa22.8■■□□□ 1.24
CTSA-217ENST00000607482 TRIM32Q13049 653 aa22.8■■□□□ 1.24
CTSA-217ENST00000607482 FAM47AQ5JRC9 791 aa22.8■■□□□ 1.24
CTSA-217ENST00000607482 FAM227BQ96M60 508 aa22.8■■□□□ 1.24
CTSA-217ENST00000607482 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.8■■□□□ 1.24
CTSA-217ENST00000607482 DIAPH3Q9NSV4 1193 aa22.8■■□□□ 1.24
CTSA-217ENST00000607482 RANBP6O60518 1105 aaKnown RBP22.79■■□□□ 1.24
CTSA-217ENST00000607482 CTDSPL2Q05D32 466 aa22.79■■□□□ 1.24
CTSA-217ENST00000607482 NMIQ13287 307 aaPredicted RBP22.79■■□□□ 1.24
CTSA-217ENST00000607482 PLEKHM2Q8IWE5 1019 aa22.79■■□□□ 1.24
CTSA-217ENST00000607482 SHCBP1Q8NEM2 672 aa22.79■■□□□ 1.24
CTSA-217ENST00000607482 CEP95Q96GE4 821 aa22.79■■□□□ 1.24
CTSA-217ENST00000607482 A0A0D9SFI3 127 aa22.78■■□□□ 1.24
CTSA-217ENST00000607482 SLC25A27O95847 323 aa22.78■■□□□ 1.24
CTSA-217ENST00000607482 CCL14Q16627 93 aa22.78■■□□□ 1.24
CTSA-217ENST00000607482 NEDD1Q8NHV4 660 aa22.78■■□□□ 1.24
CTSA-217ENST00000607482 USP6NLQ92738 828 aa22.78■■□□□ 1.24
CTSA-217ENST00000607482 NUP88Q99567 741 aaPredicted RBP22.78■■□□□ 1.24
CTSA-217ENST00000607482 SLF1Q9BQI6 1058 aa22.78■■□□□ 1.24
CTSA-217ENST00000607482 FBXO28Q9NVF7 368 aa22.78■■□□□ 1.24
CTSA-217ENST00000607482 MTMR4Q9NYA4 1195 aa22.78■■□□□ 1.24
CTSA-217ENST00000607482 HIP1O00291 1037 aa22.77■■□□□ 1.24
CTSA-217ENST00000607482 NDUFB10O96000 172 aa22.77■■□□□ 1.24
CTSA-217ENST00000607482 FCER1AP12319 257 aa22.77■■□□□ 1.24
CTSA-217ENST00000607482 CNGA1P29973 690 aa22.77■■□□□ 1.24
CTSA-217ENST00000607482 SLC4A3P48751 1232 aa22.77■■□□□ 1.24
CTSA-217ENST00000607482 IKQ13123 557 aaPredicted RBP22.77■■□□□ 1.24
CTSA-217ENST00000607482 GRB14Q14449 540 aa22.77■■□□□ 1.24
CTSA-217ENST00000607482 VPS53Q5VIR6 699 aa22.77■■□□□ 1.24
CTSA-217ENST00000607482 LRRC47Q8N1G4 583 aaKnown RBP22.77■■□□□ 1.24
CTSA-217ENST00000607482 PPP1R9AQ9ULJ8 1098 aa22.77■■□□□ 1.24
CTSA-217ENST00000607482 STX8Q9UNK0 236 aa22.77■■□□□ 1.24
CTSA-217ENST00000607482 VWA5AO00534 786 aa22.76■■□□□ 1.23
CTSA-217ENST00000607482 ZBED4O75132 1171 aa22.76■■□□□ 1.23
CTSA-217ENST00000607482 SDSP20132 328 aa22.76■■□□□ 1.23
CTSA-217ENST00000607482 ADORA2AP29274 412 aa22.76■■□□□ 1.23
CTSA-217ENST00000607482 CACNB2Q08289 660 aaPredicted RBP22.76■■□□□ 1.23
CTSA-217ENST00000607482 RRP12Q5JTH9 1297 aaKnown RBP22.76■■□□□ 1.23
CTSA-217ENST00000607482 PRPF38AQ8NAV1 312 aaKnown RBP22.76■■□□□ 1.23
CTSA-217ENST00000607482 OSBPL3Q9H4L5 887 aa22.76■■□□□ 1.23
CTSA-217ENST00000607482 COPB2P35606 906 aa22.75■■□□□ 1.23
CTSA-217ENST00000607482 STAT3P40763 770 aa22.75■■□□□ 1.23
CTSA-217ENST00000607482 KCTD2Q14681 263 aa22.75■■□□□ 1.23
CTSA-217ENST00000607482 TMEM132BQ14DG7 1078 aa22.75■■□□□ 1.23
CTSA-217ENST00000607482 SLFN13Q68D06 897 aa22.75■■□□□ 1.23
CTSA-217ENST00000607482 NECAB2Q7Z6G3 386 aa22.75■■□□□ 1.23
CTSA-217ENST00000607482 KIFC2Q96AC6 838 aa22.75■■□□□ 1.23
CTSA-217ENST00000607482 SYNPO2Q9UMS6 1093 aa22.75■■□□□ 1.23
CTSA-217ENST00000607482 NR2E3Q9Y5X4 410 aa22.75■■□□□ 1.23
CTSA-217ENST00000607482 CCDC171Q6TFL3 1326 aa22.75■■□□□ 1.23
CTSA-217ENST00000607482 IGKV6D-41A0A0C4DH26 115 aa22.74■■□□□ 1.23
CTSA-217ENST00000607482 FGAP02671 866 aa22.74■■□□□ 1.23
CTSA-217ENST00000607482 ALX1Q15699 326 aa22.74■■□□□ 1.23
CTSA-217ENST00000607482 CWC27Q6UX04 472 aaKnown RBP22.74■■□□□ 1.23
CTSA-217ENST00000607482 ANKLE1Q8NAG6 615 aa22.74■■□□□ 1.23
CTSA-217ENST00000607482 MKL1Q969V6 931 aa22.74■■□□□ 1.23
CTSA-217ENST00000607482 CHMP4CQ96CF2 233 aa22.74■■□□□ 1.23
CTSA-217ENST00000607482 PAWRQ96IZ0 340 aaKnown RBP22.74■■□□□ 1.23
CTSA-217ENST00000607482 MMP19Q99542 508 aa22.74■■□□□ 1.23
CTSA-217ENST00000607482 CRISPLD2Q9H0B8 497 aa22.74■■□□□ 1.23
CTSA-217ENST00000607482 FEM1BQ9UK73 627 aa22.74■■□□□ 1.23
CTSA-217ENST00000607482 HOXC6P09630 235 aa22.73■■□□□ 1.23
CTSA-217ENST00000607482 HSPD1P10809 573 aaKnown RBP22.73■■□□□ 1.23
CTSA-217ENST00000607482 MAP3K21Q5TCX8 1036 aa22.73■■□□□ 1.23
CTSA-217ENST00000607482 ANAPC4Q9UJX5 808 aa22.73■■□□□ 1.23
CTSA-217ENST00000607482 EVI5O60447 810 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 BMP3P12645 472 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 CCND3P30281 292 aaPredicted RBP22.72■■□□□ 1.23
CTSA-217ENST00000607482 SLC1A4P43007 532 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 HAND2P61296 217 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 RIOX2Q8IUF8 465 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 ABRAQ8N0Z2 381 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 CPXCR1Q8N123 301 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 GMCL1P1Q8NEA9 526 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 NBPF3Q9H094 633 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 INCENPQ9NQS7 918 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 ADAMTS5Q9UNA0 930 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 MTMR7Q9Y216 660 aa22.72■■□□□ 1.23
CTSA-217ENST00000607482 PLXNB2O15031 1838 aa22.71■■□□□ 1.23
CTSA-217ENST00000607482 CYP2C19P33261 490 aa22.71■■□□□ 1.23
CTSA-217ENST00000607482 SNRNP48Q6IEG0 339 aaKnown RBP22.71■■□□□ 1.23
CTSA-217ENST00000607482 MFSD6Q6ZSS7 791 aa22.71■■□□□ 1.23
CTSA-217ENST00000607482 ZNF589Q86UQ0 364 aaPredicted RBP22.71■■□□□ 1.23
CTSA-217ENST00000607482 NPLOC4Q8TAT6 608 aa22.71■■□□□ 1.23
CTSA-217ENST00000607482 TEX13BQ9BXU2 312 aa22.71■■□□□ 1.23
CTSA-217ENST00000607482 FLRT1Q9NZU1 646 aa22.71■■□□□ 1.23
CTSA-217ENST00000607482 PLIN4Q96Q06 1357 aa22.71■■□□□ 1.23
CTSA-217ENST00000607482 H0YGN5 161 aa22.7■■□□□ 1.22
CTSA-217ENST00000607482 FOXP2O15409 715 aa22.7■■□□□ 1.22
CTSA-217ENST00000607482 CHURC1Q8WUH1 139 aa22.7■■□□□ 1.22
CTSA-217ENST00000607482 RNF41Q9H4P4 317 aaPredicted RBP22.7■■□□□ 1.22
CTSA-217ENST00000607482 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.7■■□□□ 1.22
CTSA-217ENST00000607482 TMEM232C9JQI7 657 aa22.69■■□□□ 1.22
CTSA-217ENST00000607482 ZNF213O14771 459 aa22.69■■□□□ 1.22
CTSA-217ENST00000607482 ORC4O43929 436 aa22.69■■□□□ 1.22
CTSA-217ENST00000607482 MSCO60682 206 aa22.69■■□□□ 1.22
CTSA-217ENST00000607482 MCCP23508 829 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms