RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 MX1P20591 662 aa15.94■□□□□ 0.14
CTSA-213ENST00000606782 CCND3P30281 292 aaPredicted RBP15.94■□□□□ 0.14
CTSA-213ENST00000606782 ZMYM1Q5SVZ6 1142 aa15.94■□□□□ 0.14
CTSA-213ENST00000606782 WDR78Q5VTH9 848 aa15.94■□□□□ 0.14
CTSA-213ENST00000606782 MFSD14CQ5VZR4 134 aa15.94■□□□□ 0.14
CTSA-213ENST00000606782 OLFML2BQ68BL8 750 aa15.94■□□□□ 0.14
CTSA-213ENST00000606782 IFNL3Q8IZI9 196 aa15.94■□□□□ 0.14
CTSA-213ENST00000606782 NPLOC4Q8TAT6 608 aa15.94■□□□□ 0.14
CTSA-213ENST00000606782 ATG4CQ96DT6 458 aa15.94■□□□□ 0.14
CTSA-213ENST00000606782 COL6A1P12109 1028 aa15.93■□□□□ 0.14
CTSA-213ENST00000606782 PDE4AP27815 886 aa15.93■□□□□ 0.14
CTSA-213ENST00000606782 PLEKHM2Q8IWE5 1019 aa15.93■□□□□ 0.14
CTSA-213ENST00000606782 MKL1Q969V6 931 aa15.93■□□□□ 0.14
CTSA-213ENST00000606782 MKNK2Q9HBH9 465 aa15.93■□□□□ 0.14
CTSA-213ENST00000606782 ZNF287Q9HBT7 754 aa15.93■□□□□ 0.14
CTSA-213ENST00000606782 GOPCQ9HD26 462 aa15.93■□□□□ 0.14
CTSA-213ENST00000606782 SYNPO2Q9UMS6 1093 aa15.93■□□□□ 0.14
CTSA-213ENST00000606782 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
CTSA-213ENST00000606782 ALPK3Q96L96 1907 aa15.93■□□□□ 0.14
CTSA-213ENST00000606782 RANBP2P49792 3224 aaKnown RBP15.92■□□□□ 0.14
CTSA-213ENST00000606782 MINDY4BA8MYZ0 360 aa15.92■□□□□ 0.14
CTSA-213ENST00000606782 SLC25A27O95847 323 aa15.92■□□□□ 0.14
CTSA-213ENST00000606782 ADORA2AP29274 412 aa15.92■□□□□ 0.14
CTSA-213ENST00000606782 ATP2B2Q01814 1243 aa15.92■□□□□ 0.14
CTSA-213ENST00000606782 TMEM132BQ14DG7 1078 aa15.92■□□□□ 0.14
CTSA-213ENST00000606782 CHRDL2Q6WN34 429 aa15.92■□□□□ 0.14
CTSA-213ENST00000606782 TICAM2Q86XR7 235 aa15.92■□□□□ 0.14
CTSA-213ENST00000606782 SEC62Q99442 399 aaKnown RBP15.92■□□□□ 0.14
CTSA-213ENST00000606782 OSBPL3Q9H4L5 887 aa15.92■□□□□ 0.14
CTSA-213ENST00000606782 C11orf49Q9H6J7 331 aa15.92■□□□□ 0.14
CTSA-213ENST00000606782 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
CTSA-213ENST00000606782 PPP1R9AQ9ULJ8 1098 aa15.92■□□□□ 0.14
CTSA-213ENST00000606782 VWA5AO00534 786 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 MSCO60682 206 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 COBLO75128 1261 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 TDO2P48775 406 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 PDE1AP54750 535 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 DPP9Q86TI2 863 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 RIOX2Q8IUF8 465 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 REPS2Q8NFH8 660 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 FSD1Q9BTV5 496 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 NACAP1Q9BZK3 213 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 FBXO28Q9NVF7 368 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 PFASO15067 1338 aa15.91■□□□□ 0.14
CTSA-213ENST00000606782 A0A1W2PPC1 479 aa15.9■□□□□ 0.14
CTSA-213ENST00000606782 F5H6K3 240 aa15.9■□□□□ 0.14
CTSA-213ENST00000606782 APPP05067 770 aa15.9■□□□□ 0.14
CTSA-213ENST00000606782 CYBAP13498 195 aa15.9■□□□□ 0.14
CTSA-213ENST00000606782 CYP2C19P33261 490 aa15.9■□□□□ 0.14
CTSA-213ENST00000606782 KLRC3Q07444 240 aa15.9■□□□□ 0.14
CTSA-213ENST00000606782 ZNF444Q8N0Y2 327 aaPredicted RBP15.9■□□□□ 0.14
CTSA-213ENST00000606782 TRPV1Q8NER1 839 aa15.9■□□□□ 0.14
CTSA-213ENST00000606782 SLC5A4Q9NY91 659 aa15.9■□□□□ 0.14
CTSA-213ENST00000606782 MTMR4Q9NYA4 1195 aa15.9■□□□□ 0.14
CTSA-213ENST00000606782 DDX20Q9UHI6 824 aaKnown RBP15.9■□□□□ 0.14
CTSA-213ENST00000606782 ZNF214Q9UL59 606 aaPredicted RBP15.9■□□□□ 0.14
CTSA-213ENST00000606782 PLIN4Q96Q06 1357 aa15.89■□□□□ 0.13
CTSA-213ENST00000606782 FOXP2O15409 715 aa15.89■□□□□ 0.13
CTSA-213ENST00000606782 FCER1AP12319 257 aa15.89■□□□□ 0.13
CTSA-213ENST00000606782 COPB2P35606 906 aa15.89■□□□□ 0.13
CTSA-213ENST00000606782 STAT3P40763 770 aa15.89■□□□□ 0.13
CTSA-213ENST00000606782 PLS1Q14651 629 aa15.89■□□□□ 0.13
CTSA-213ENST00000606782 FAM83BQ5T0W9 1011 aa15.89■□□□□ 0.13
CTSA-213ENST00000606782 NCAPG2Q86XI2 1143 aa15.89■□□□□ 0.13
CTSA-213ENST00000606782 NEDD1Q8NHV4 660 aa15.89■□□□□ 0.13
CTSA-213ENST00000606782 EVI5LQ96CN4 794 aa15.89■□□□□ 0.13
CTSA-213ENST00000606782 ZNFX1Q9P2E3 1918 aaKnown RBP15.88■□□□□ 0.13
CTSA-213ENST00000606782 ATP2A1O14983 1001 aa15.88■□□□□ 0.13
CTSA-213ENST00000606782 NDUFB10O96000 172 aa15.88■□□□□ 0.13
CTSA-213ENST00000606782 PDE4BQ07343 736 aa15.88■□□□□ 0.13
CTSA-213ENST00000606782 PRPF38AQ8NAV1 312 aaKnown RBP15.88■□□□□ 0.13
CTSA-213ENST00000606782 GMCL1P1Q8NEA9 526 aa15.88■□□□□ 0.13
CTSA-213ENST00000606782 CEP95Q96GE4 821 aa15.88■□□□□ 0.13
CTSA-213ENST00000606782 SLF1Q9BQI6 1058 aa15.88■□□□□ 0.13
CTSA-213ENST00000606782 NAPBQ9H115 298 aa15.88■□□□□ 0.13
CTSA-213ENST00000606782 CLIP2Q9UDT6 1046 aa15.88■□□□□ 0.13
CTSA-213ENST00000606782 DIS3Q9Y2L1 958 aaKnown RBP15.88■□□□□ 0.13
CTSA-213ENST00000606782 COL11A1P12107 1806 aaPredicted RBP15.87■□□□□ 0.13
CTSA-213ENST00000606782 PRDM1O75626 825 aa15.87■□□□□ 0.13
CTSA-213ENST00000606782 TTLL1O95922 423 aa15.87■□□□□ 0.13
CTSA-213ENST00000606782 BMP8BP34820 402 aa15.87■□□□□ 0.13
CTSA-213ENST00000606782 PPARAQ07869 468 aa15.87■□□□□ 0.13
CTSA-213ENST00000606782 STK11IPQ8N1F8 1099 aa15.87■□□□□ 0.13
CTSA-213ENST00000606782 MAML3Q96JK9 1138 aa15.87■□□□□ 0.13
CTSA-213ENST00000606782 GDF15Q99988 308 aa15.87■□□□□ 0.13
CTSA-213ENST00000606782 NRBP1Q9UHY1 535 aa15.87■□□□□ 0.13
CTSA-213ENST00000606782 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.87■□□□□ 0.13
CTSA-213ENST00000606782 FRMPD3Q5JV73 1810 aa15.87■□□□□ 0.13
CTSA-213ENST00000606782 SEPT4O43236 478 aa15.86■□□□□ 0.13
CTSA-213ENST00000606782 SLC3A2P08195 630 aaKnown RBP15.86■□□□□ 0.13
CTSA-213ENST00000606782 FGRP09769 529 aa15.86■□□□□ 0.13
CTSA-213ENST00000606782 ALX1Q15699 326 aa15.86■□□□□ 0.13
CTSA-213ENST00000606782 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.86■□□□□ 0.13
CTSA-213ENST00000606782 NUP88Q99567 741 aaPredicted RBP15.86■□□□□ 0.13
CTSA-213ENST00000606782 HELLSQ9NRZ9 838 aa15.86■□□□□ 0.13
CTSA-213ENST00000606782 ANAPC4Q9UJX5 808 aa15.86■□□□□ 0.13
CTSA-213ENST00000606782 CNGA1P29973 690 aa15.85■□□□□ 0.13
CTSA-213ENST00000606782 ZNF792Q3KQV3 632 aa15.85■□□□□ 0.13
CTSA-213ENST00000606782 PPP4R3BQ5MIZ7 849 aa15.85■□□□□ 0.13
CTSA-213ENST00000606782 C7orf61Q8IZ16 206 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms