RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 CCNA1P78396 465 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 PDE4BQ07343 736 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 PLS1Q14651 629 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 CWC27Q6UX04 472 aaKnown RBP14.62□□□□□ -0.07
CTSA-210ENST00000606000 RASGRP2Q7LDG7 609 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 NEDD1Q8NHV4 660 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 NKX2-3Q8TAU0 364 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 U2AF1L4Q8WU68 220 aaKnown RBP14.62□□□□□ -0.07
CTSA-210ENST00000606000 DEFB118Q96PH6 123 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 NBPF3Q9H094 633 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 SPATC1LQ9H0A9 340 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.62□□□□□ -0.07
CTSA-210ENST00000606000 IL25Q9H293 177 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 MTMR4Q9NYA4 1195 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 HOXC10Q9NYD6 342 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 F5H6K3 240 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 FGAP02671 866 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 SLC3A2P08195 630 aaKnown RBP14.61□□□□□ -0.07
CTSA-210ENST00000606000 ERCC3P19447 782 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 PTPREP23469 700 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 RGS2P41220 211 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 KLRC3Q07444 240 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 MAP2K5Q13163 448 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 TMEM132BQ14DG7 1078 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 NPLOC4Q8TAT6 608 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 APBA2Q99767 749 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 ZNF287Q9HBT7 754 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 PAK6Q9NQU5 681 aaPredicted RBP14.61□□□□□ -0.07
CTSA-210ENST00000606000 FLRT1Q9NZU1 646 aa14.61□□□□□ -0.07
CTSA-210ENST00000606000 SGPL1O95470 568 aa14.6□□□□□ -0.07
CTSA-210ENST00000606000 TTLL1O95922 423 aa14.6□□□□□ -0.07
CTSA-210ENST00000606000 ZKSCAN1P17029 563 aaPredicted RBP14.6□□□□□ -0.07
CTSA-210ENST00000606000 GRB14Q14449 540 aa14.6□□□□□ -0.07
CTSA-210ENST00000606000 ALX1Q15699 326 aa14.6□□□□□ -0.07
CTSA-210ENST00000606000 TTC22Q5TAA0 569 aa14.6□□□□□ -0.07
CTSA-210ENST00000606000 REPS2Q8NFH8 660 aa14.6□□□□□ -0.07
CTSA-210ENST00000606000 IL17RBQ9NRM6 502 aa14.6□□□□□ -0.07
CTSA-210ENST00000606000 DIAPH3Q9NSV4 1193 aa14.6□□□□□ -0.07
CTSA-210ENST00000606000 ANAPC4Q9UJX5 808 aa14.6□□□□□ -0.07
CTSA-210ENST00000606000 PPP1R9AQ9ULJ8 1098 aa14.6□□□□□ -0.07
CTSA-210ENST00000606000 ADAMTS5Q9UNA0 930 aa14.6□□□□□ -0.07
CTSA-210ENST00000606000 SLC15A5A6NIM6 579 aa14.59□□□□□ -0.07
CTSA-210ENST00000606000 TSPY2A6NKD2 308 aa14.59□□□□□ -0.07
CTSA-210ENST00000606000 VWA5AO00534 786 aa14.59□□□□□ -0.07
CTSA-210ENST00000606000 XRCC5P13010 732 aaKnown RBP14.59□□□□□ -0.07
CTSA-210ENST00000606000 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
CTSA-210ENST00000606000 CCND3P30281 292 aaPredicted RBP14.59□□□□□ -0.07
CTSA-210ENST00000606000 CACNB2Q08289 660 aaPredicted RBP14.59□□□□□ -0.07
CTSA-210ENST00000606000 RRP12Q5JTH9 1297 aaKnown RBP14.59□□□□□ -0.07
CTSA-210ENST00000606000 MAP3K21Q5TCX8 1036 aa14.59□□□□□ -0.07
CTSA-210ENST00000606000 NCAPG2Q86XI2 1143 aa14.59□□□□□ -0.07
CTSA-210ENST00000606000 TBC1D10CQ8IV04 446 aa14.59□□□□□ -0.07
CTSA-210ENST00000606000 IVNS1ABPQ9Y6Y0 642 aa14.59□□□□□ -0.07
CTSA-210ENST00000606000 KIAA0100Q14667 2235 aaKnown RBP14.59□□□□□ -0.07
CTSA-210ENST00000606000 RANBP6O60518 1105 aaKnown RBP14.58□□□□□ -0.08
CTSA-210ENST00000606000 ADORA2AP29274 412 aa14.58□□□□□ -0.08
CTSA-210ENST00000606000 UBE2Q1Q7Z7E8 422 aa14.58□□□□□ -0.08
CTSA-210ENST00000606000 SKAP1Q86WV1 359 aa14.58□□□□□ -0.08
CTSA-210ENST00000606000 MB21D1Q8N884 522 aa14.58□□□□□ -0.08
CTSA-210ENST00000606000 SHCBP1Q8NEM2 672 aa14.58□□□□□ -0.08
CTSA-210ENST00000606000 DIS3LQ8TF46 1054 aaKnown RBP14.58□□□□□ -0.08
CTSA-210ENST00000606000 MKL1Q969V6 931 aa14.58□□□□□ -0.08
CTSA-210ENST00000606000 SLF1Q9BQI6 1058 aa14.58□□□□□ -0.08
CTSA-210ENST00000606000 TOMM22Q9NS69 142 aa14.58□□□□□ -0.08
CTSA-210ENST00000606000 ZNF214Q9UL59 606 aaPredicted RBP14.58□□□□□ -0.08
CTSA-210ENST00000606000 MKI67P46013 3256 aaKnown RBP14.58□□□□□ -0.08
CTSA-210ENST00000606000 ZMYM6O95789 1325 aa14.58□□□□□ -0.08
CTSA-210ENST00000606000 RPTORQ8N122 1335 aa14.58□□□□□ -0.08
CTSA-210ENST00000606000 PLXNA1Q9UIW2 1896 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 ALPK3Q96L96 1907 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 ORC4O43929 436 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 COBLO75128 1261 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 FARP2O94887 1054 aaPredicted RBP14.57□□□□□ -0.08
CTSA-210ENST00000606000 FGRP09769 529 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 PRPF38BQ5VTL8 546 aaKnown RBP14.57□□□□□ -0.08
CTSA-210ENST00000606000 SLFN13Q68D06 897 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 TICAM2Q86XR7 235 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 GMCL1P1Q8NEA9 526 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 CRISPLD2Q9H0B8 497 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 HMX1Q9NP08 348 aaPredicted RBP14.57□□□□□ -0.08
CTSA-210ENST00000606000 STX8Q9UNK0 236 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 MTMR7Q9Y216 660 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 NEDD4P46934 1319 aa14.57□□□□□ -0.08
CTSA-210ENST00000606000 TFRCP02786 760 aaKnown RBP14.56□□□□□ -0.08
CTSA-210ENST00000606000 CYP2C19P33261 490 aa14.56□□□□□ -0.08
CTSA-210ENST00000606000 KIFC2Q96AC6 838 aa14.56□□□□□ -0.08
CTSA-210ENST00000606000 ISY1Q9ULR0 285 aaKnown RBP14.56□□□□□ -0.08
CTSA-210ENST00000606000 RIPK3Q9Y572 518 aa14.56□□□□□ -0.08
CTSA-210ENST00000606000 ZNFX1Q9P2E3 1918 aaKnown RBP14.56□□□□□ -0.08
CTSA-210ENST00000606000 HOXC6P09630 235 aa14.55□□□□□ -0.08
CTSA-210ENST00000606000 BMP3P12645 472 aa14.55□□□□□ -0.08
CTSA-210ENST00000606000 MCCP23508 829 aa14.55□□□□□ -0.08
CTSA-210ENST00000606000 STAT3P40763 770 aa14.55□□□□□ -0.08
CTSA-210ENST00000606000 SLC4A3P48751 1232 aa14.55□□□□□ -0.08
CTSA-210ENST00000606000 KCTD1Q719H9 257 aa14.55□□□□□ -0.08
CTSA-210ENST00000606000 DPP9Q86TI2 863 aa14.55□□□□□ -0.08
CTSA-210ENST00000606000 RIOX2Q8IUF8 465 aa14.55□□□□□ -0.08
CTSA-210ENST00000606000 TRMT44Q8IYL2 757 aaKnown RBP14.55□□□□□ -0.08
CTSA-210ENST00000606000 CPXCR1Q8N123 301 aa14.55□□□□□ -0.08
CTSA-210ENST00000606000 TRPV1Q8NER1 839 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms