RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 PAGR1Q9BTK6 254 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 FBXO28Q9NVF7 368 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 HOXC10Q9NYD6 342 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 RABGAP1Q9Y3P9 1069 aa16.75■□□□□ 0.27
TUBE1-211ENST00000605457 ZNFX1Q9P2E3 1918 aaKnown RBP16.74■□□□□ 0.27
TUBE1-211ENST00000605457 DSG3P32926 999 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 FCGRTP55899 365 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 SLFN13Q68D06 897 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 GMCL1Q96IK5 515 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 TTC14Q96N46 770 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 TMEM47Q9BQJ4 181 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 SLC27A2O14975 620 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 TOP1P11387 765 aaKnown RBP16.74■□□□□ 0.27
TUBE1-211ENST00000605457 TRDNQ13061 729 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 FBXO46Q6PJ61 603 aaPredicted RBP16.74■□□□□ 0.27
TUBE1-211ENST00000605457 RASGRP2Q7LDG7 609 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 ATG4CQ96DT6 458 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 BTBD7Q9P203 1132 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 PPP1R9AQ9ULJ8 1098 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 PTPN22Q9Y2R2 807 aa16.74■□□□□ 0.27
TUBE1-211ENST00000605457 MYH6P13533 1939 aa16.73■□□□□ 0.27
TUBE1-211ENST00000605457 FMNL1O95466 1100 aaPredicted RBP16.73■□□□□ 0.27
TUBE1-211ENST00000605457 Q3C1V9 767 aa16.73■□□□□ 0.27
TUBE1-211ENST00000605457 CCDC178Q5BJE1 867 aa16.73■□□□□ 0.27
TUBE1-211ENST00000605457 CREB3L3Q68CJ9 461 aa16.73■□□□□ 0.27
TUBE1-211ENST00000605457 CYB5R4Q7L1T6 521 aa16.73■□□□□ 0.27
TUBE1-211ENST00000605457 DGKHQ86XP1 1220 aa16.73■□□□□ 0.27
TUBE1-211ENST00000605457 MB21D1Q8N884 522 aa16.73■□□□□ 0.27
TUBE1-211ENST00000605457 ENAHQ8N8S7 591 aaPredicted RBP16.73■□□□□ 0.27
TUBE1-211ENST00000605457 ZSCAN10Q96SZ4 725 aaPredicted RBP16.73■□□□□ 0.27
TUBE1-211ENST00000605457 ADAMTS5Q9UNA0 930 aa16.73■□□□□ 0.27
TUBE1-211ENST00000605457 TNKSO95271 1327 aa16.72■□□□□ 0.27
TUBE1-211ENST00000605457 SMCHD1A6NHR9 2005 aa16.72■□□□□ 0.27
TUBE1-211ENST00000605457 BMP3P12645 472 aa16.72■□□□□ 0.27
TUBE1-211ENST00000605457 SLC1A4P43007 532 aa16.72■□□□□ 0.27
TUBE1-211ENST00000605457 RALYLQ86SE5 291 aaKnown RBP16.72■□□□□ 0.27
TUBE1-211ENST00000605457 NCOA7Q8NI08 942 aa16.72■□□□□ 0.27
TUBE1-211ENST00000605457 SLF1Q9BQI6 1058 aa16.72■□□□□ 0.27
TUBE1-211ENST00000605457 PORCNQ9H237 461 aa16.72■□□□□ 0.27
TUBE1-211ENST00000605457 SRRDQ9UH36 339 aa16.72■□□□□ 0.27
TUBE1-211ENST00000605457 ZNF236Q9UL36 1845 aa16.72■□□□□ 0.27
TUBE1-211ENST00000605457 TNPO2O14787 897 aaKnown RBP16.71■□□□□ 0.27
TUBE1-211ENST00000605457 MCCP23508 829 aa16.71■□□□□ 0.27
TUBE1-211ENST00000605457 PRMT2P55345 433 aa16.71■□□□□ 0.27
TUBE1-211ENST00000605457 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
TUBE1-211ENST00000605457 ANKS1AQ92625 1134 aa16.71■□□□□ 0.27
TUBE1-211ENST00000605457 UBAC1Q9BSL1 405 aa16.71■□□□□ 0.27
TUBE1-211ENST00000605457 FEM1BQ9UK73 627 aa16.71■□□□□ 0.27
TUBE1-211ENST00000605457 KIAA0100Q14667 2235 aaKnown RBP16.71■□□□□ 0.27
TUBE1-211ENST00000605457 VWA5AO00534 786 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 HOXD10P28358 340 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 CCNA1P78396 465 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 MB21D2Q8IYB1 491 aaPredicted RBP16.7■□□□□ 0.26
TUBE1-211ENST00000605457 PRPF38AQ8NAV1 312 aaKnown RBP16.7■□□□□ 0.26
TUBE1-211ENST00000605457 DCAF4Q8WV16 495 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 ABHD8Q96I13 439 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 PTCH2Q9Y6C5 1203 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 REC8O95072 547 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 PDHBP11177 359 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 MAPK4P31152 587 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 STAT2P52630 851 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 PRKCZQ05513 592 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 SEC23AQ15436 765 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 RNF20Q5VTR2 975 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 KCTD1Q719H9 257 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 PNMA1Q8ND90 353 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 REPS2Q8NFH8 660 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 COA7Q96BR5 231 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 CHMP4CQ96CF2 233 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 SPATC1LQ9H0A9 340 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 GABRQQ9UN88 632 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 HPS5Q9UPZ3 1129 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
TUBE1-211ENST00000605457 PLXNA1Q9UIW2 1896 aa16.69■□□□□ 0.26
TUBE1-211ENST00000605457 TMEM232C9JQI7 657 aa16.69■□□□□ 0.26
TUBE1-211ENST00000605457 PLA2G6O60733 806 aa16.69■□□□□ 0.26
TUBE1-211ENST00000605457 SNHG28P0DPA3 235 aa16.69■□□□□ 0.26
TUBE1-211ENST00000605457 ANTXR2P58335 489 aa16.69■□□□□ 0.26
TUBE1-211ENST00000605457 TMEM132BQ14DG7 1078 aa16.69■□□□□ 0.26
TUBE1-211ENST00000605457 MOV10L1Q9BXT6 1211 aaKnown RBP16.69■□□□□ 0.26
TUBE1-211ENST00000605457 KAT14Q9H8E8 782 aa16.69■□□□□ 0.26
TUBE1-211ENST00000605457 ZNF214Q9UL59 606 aaPredicted RBP16.69■□□□□ 0.26
TUBE1-211ENST00000605457 ISY1Q9ULR0 285 aaKnown RBP16.69■□□□□ 0.26
TUBE1-211ENST00000605457 RBBP6Q7Z6E9 1792 aaKnown RBP16.68■□□□□ 0.26
TUBE1-211ENST00000605457 COL9A3Q14050 684 aaPredicted RBP16.68■□□□□ 0.26
TUBE1-211ENST00000605457 CCDC96Q2M329 555 aa16.68■□□□□ 0.26
TUBE1-211ENST00000605457 IFIT1BQ5T764 474 aaKnown RBP16.68■□□□□ 0.26
TUBE1-211ENST00000605457 GPR142Q7Z601 462 aa16.68■□□□□ 0.26
TUBE1-211ENST00000605457 FAM160B2Q86V87 743 aa16.68■□□□□ 0.26
TUBE1-211ENST00000605457 KIFC2Q96AC6 838 aa16.68■□□□□ 0.26
TUBE1-211ENST00000605457 FLT3LGP49771 235 aa16.67■□□□□ 0.26
TUBE1-211ENST00000605457 PLS1Q14651 629 aa16.67■□□□□ 0.26
TUBE1-211ENST00000605457 TSGA10IPQ3SY00 556 aa16.67■□□□□ 0.26
TUBE1-211ENST00000605457 CHST3Q7LGC8 479 aa16.67■□□□□ 0.26
TUBE1-211ENST00000605457 CCAR1Q8IX12 1150 aaKnown RBP16.67■□□□□ 0.26
TUBE1-211ENST00000605457 RASEFQ8IZ41 740 aa16.67■□□□□ 0.26
TUBE1-211ENST00000605457 SHCBP1Q8NEM2 672 aa16.67■□□□□ 0.26
TUBE1-211ENST00000605457 CHURC1Q8WUH1 139 aa16.67■□□□□ 0.26
TUBE1-211ENST00000605457 SLC38A10Q9HBR0 1119 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms