RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 NOVP48745 357 aa12.71□□□□□ -0.37
TUBE1-210ENST00000604967 HAND2P61296 217 aa12.71□□□□□ -0.37
TUBE1-210ENST00000604967 LRRFIP1Q32MZ4 808 aaKnown RBP12.71□□□□□ -0.37
TUBE1-210ENST00000604967 TTC22Q5TAA0 569 aa12.71□□□□□ -0.37
TUBE1-210ENST00000604967 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
TUBE1-210ENST00000604967 U2AF1L4Q8WU68 220 aaKnown RBP12.71□□□□□ -0.37
TUBE1-210ENST00000604967 GTF3C2Q8WUA4 911 aaPredicted RBP12.71□□□□□ -0.37
TUBE1-210ENST00000604967 CHMP4CQ96CF2 233 aa12.71□□□□□ -0.37
TUBE1-210ENST00000604967 SPATC1LQ9H0A9 340 aa12.71□□□□□ -0.37
TUBE1-210ENST00000604967 BIN2Q9UBW5 565 aaPredicted RBP12.71□□□□□ -0.37
TUBE1-210ENST00000604967 VWA5AO00534 786 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 HMGCRP04035 888 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 ERCC3P19447 782 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 CACNB2Q08289 660 aaPredicted RBP12.7□□□□□ -0.38
TUBE1-210ENST00000604967 GRB14Q14449 540 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 CWC27Q6UX04 472 aaKnown RBP12.7□□□□□ -0.38
TUBE1-210ENST00000604967 TRPV1Q8NER1 839 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 DEFB118Q96PH6 123 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 NUDT12Q9BQG2 462 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 TMEM106CQ9BVX2 250 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 NACAP1Q9BZK3 213 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 CRISPLD2Q9H0B8 497 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 ZNF214Q9UL59 606 aaPredicted RBP12.7□□□□□ -0.38
TUBE1-210ENST00000604967 PPP1R9AQ9ULJ8 1098 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 MYH4Q9Y623 1939 aa12.7□□□□□ -0.38
TUBE1-210ENST00000604967 ZMYM6O95789 1325 aa12.69□□□□□ -0.38
TUBE1-210ENST00000604967 NEDD4P46934 1319 aa12.69□□□□□ -0.38
TUBE1-210ENST00000604967 ORC4O43929 436 aa12.69□□□□□ -0.38
TUBE1-210ENST00000604967 SGPL1O95470 568 aa12.69□□□□□ -0.38
TUBE1-210ENST00000604967 XRCC5P13010 732 aaKnown RBP12.69□□□□□ -0.38
TUBE1-210ENST00000604967 TAL1P17542 331 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-210ENST00000604967 CCND3P30281 292 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-210ENST00000604967 MAP2K5Q13163 448 aa12.69□□□□□ -0.38
TUBE1-210ENST00000604967 RCSD1Q6JBY9 416 aa12.69□□□□□ -0.38
TUBE1-210ENST00000604967 TICAM2Q86XR7 235 aa12.69□□□□□ -0.38
TUBE1-210ENST00000604967 ZNF444Q8N0Y2 327 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-210ENST00000604967 DIS3LQ8TF46 1054 aaKnown RBP12.69□□□□□ -0.38
TUBE1-210ENST00000604967 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.69□□□□□ -0.38
TUBE1-210ENST00000604967 HOXC10Q9NYD6 342 aa12.69□□□□□ -0.38
TUBE1-210ENST00000604967 RIPK3Q9Y572 518 aa12.69□□□□□ -0.38
TUBE1-210ENST00000604967 TAF6LQ9Y6J9 622 aa12.69□□□□□ -0.38
TUBE1-210ENST00000604967 ZNF236Q9UL36 1845 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 SLC15A5A6NIM6 579 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 RAD21O60216 631 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 TTLL1O95922 423 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 HOXC6P09630 235 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
TUBE1-210ENST00000604967 UBXN2AP68543 259 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 PDE4BQ07343 736 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 SOCS4Q8WXH5 440 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 APBA2Q99767 749 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 SH2D4AQ9H788 454 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 GOPCQ9HD26 462 aa12.68□□□□□ -0.38
TUBE1-210ENST00000604967 ADORA2AP29274 412 aa12.67□□□□□ -0.38
TUBE1-210ENST00000604967 CYP2C19P33261 490 aa12.67□□□□□ -0.38
TUBE1-210ENST00000604967 RGS2P41220 211 aa12.67□□□□□ -0.38
TUBE1-210ENST00000604967 COL9A3Q14050 684 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-210ENST00000604967 PLS1Q14651 629 aa12.67□□□□□ -0.38
TUBE1-210ENST00000604967 LHX8Q68G74 356 aa12.67□□□□□ -0.38
TUBE1-210ENST00000604967 GMCL1P1Q8NEA9 526 aa12.67□□□□□ -0.38
TUBE1-210ENST00000604967 SHCBP1Q8NEM2 672 aa12.67□□□□□ -0.38
TUBE1-210ENST00000604967 RPTORQ8N122 1335 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 PGK2P07205 417 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 ZKSCAN1P17029 563 aaPredicted RBP12.66□□□□□ -0.38
TUBE1-210ENST00000604967 CHMLP26374 656 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 SNAP25P60880 206 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 CCNA1P78396 465 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 PTH1RQ03431 593 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 SLFN13Q68D06 897 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 RIOX2Q8IUF8 465 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 MB21D1Q8N884 522 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 STAG1Q8WVM7 1258 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 FGD4Q96M96 766 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 SLF1Q9BQI6 1058 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 LAMA4Q16363 1823 aa12.66□□□□□ -0.38
TUBE1-210ENST00000604967 ZNF536O15090 1300 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 RANBP2P49792 3224 aaKnown RBP12.65□□□□□ -0.38
TUBE1-210ENST00000604967 ALPK3Q96L96 1907 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 DNAH12Q6ZR08 3092 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 RANBP6O60518 1105 aaKnown RBP12.65□□□□□ -0.38
TUBE1-210ENST00000604967 MCCP23508 829 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 RRP12Q5JTH9 1297 aaKnown RBP12.65□□□□□ -0.38
TUBE1-210ENST00000604967 PRAMEF19Q5SWL8 479 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 TTBK2Q6IQ55 1244 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 KCTD1Q719H9 257 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 NCAPG2Q86XI2 1143 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 TMEM47Q9BQJ4 181 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 DIAPH3Q9NSV4 1193 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 STX8Q9UNK0 236 aa12.65□□□□□ -0.38
TUBE1-210ENST00000604967 TSPY2A6NKD2 308 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 TMEM232C9JQI7 657 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 FARP2O94887 1054 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-210ENST00000604967 SLC3A2P08195 630 aaKnown RBP12.64□□□□□ -0.39
TUBE1-210ENST00000604967 BMP3P12645 472 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 CYBAP13498 195 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms