RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 BOLA2Q9H3K6 86 aa20.35■□□□□ 0.85
CCDC12-210ENST00000604181 MROH8Q9H579 483 aa20.35■□□□□ 0.85
CCDC12-210ENST00000604181 PRKAG2Q9UGJ0 569 aa20.35■□□□□ 0.85
CCDC12-210ENST00000604181 SWAP70Q9UH65 585 aa20.35■□□□□ 0.85
CCDC12-210ENST00000604181 PGK2P07205 417 aa20.34■□□□□ 0.85
CCDC12-210ENST00000604181 TAL1P17542 331 aaPredicted RBP20.34■□□□□ 0.85
CCDC12-210ENST00000604181 ITGB8P26012 769 aa20.34■□□□□ 0.85
CCDC12-210ENST00000604181 CDK8P49336 464 aa20.34■□□□□ 0.85
CCDC12-210ENST00000604181 HSP90AB4PQ58FF6 505 aa20.34■□□□□ 0.85
CCDC12-210ENST00000604181 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.34■□□□□ 0.85
CCDC12-210ENST00000604181 ABRAQ8N0Z2 381 aa20.34■□□□□ 0.85
CCDC12-210ENST00000604181 C12orf60Q5U649 245 aa20.33■□□□□ 0.85
CCDC12-210ENST00000604181 LENG1Q96BZ8 264 aaPredicted RBP20.33■□□□□ 0.85
CCDC12-210ENST00000604181 ARHGEF10LQ9HCE6 1279 aa20.33■□□□□ 0.85
CCDC12-210ENST00000604181 PAG1Q9NWQ8 432 aa20.33■□□□□ 0.85
CCDC12-210ENST00000604181 ADAMTS5Q9UNA0 930 aa20.33■□□□□ 0.85
CCDC12-210ENST00000604181 TTC28Q96AY4 2481 aa20.32■□□□□ 0.84
CCDC12-210ENST00000604181 USP17L12C9JPN9 530 aa20.32■□□□□ 0.84
CCDC12-210ENST00000604181 USP17L21D6R901 530 aa20.32■□□□□ 0.84
CCDC12-210ENST00000604181 WDR46O15213 610 aaKnown RBP20.32■□□□□ 0.84
CCDC12-210ENST00000604181 IFIT2P09913 472 aaKnown RBP20.32■□□□□ 0.84
CCDC12-210ENST00000604181 EEF2P13639 858 aaKnown RBP20.32■□□□□ 0.84
CCDC12-210ENST00000604181 C16orf86Q6ZW13 317 aa20.32■□□□□ 0.84
CCDC12-210ENST00000604181 ATP8A2Q9NTI2 1148 aa20.32■□□□□ 0.84
CCDC12-210ENST00000604181 PLXNA1Q9UIW2 1896 aa20.32■□□□□ 0.84
CCDC12-210ENST00000604181 PGK1P00558 417 aa20.31■□□□□ 0.84
CCDC12-210ENST00000604181 FCER1AP12319 257 aa20.31■□□□□ 0.84
CCDC12-210ENST00000604181 EPHB4P54760 987 aa20.31■□□□□ 0.84
CCDC12-210ENST00000604181 TLE2Q04725 743 aa20.31■□□□□ 0.84
CCDC12-210ENST00000604181 ZNF697Q5TEC3 545 aa20.31■□□□□ 0.84
CCDC12-210ENST00000604181 REPS2Q8NFH8 660 aa20.31■□□□□ 0.84
CCDC12-210ENST00000604181 CDX2Q99626 313 aaPredicted RBP20.31■□□□□ 0.84
CCDC12-210ENST00000604181 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.31■□□□□ 0.84
CCDC12-210ENST00000604181 TTYH1Q9H313 450 aaPredicted RBP20.31■□□□□ 0.84
CCDC12-210ENST00000604181 MYH7P12883 1935 aa20.31■□□□□ 0.84
CCDC12-210ENST00000604181 MUC3AQ02505 3323 aa20.3■□□□□ 0.84
CCDC12-210ENST00000604181 ZNF792Q3KQV3 632 aa20.3■□□□□ 0.84
CCDC12-210ENST00000604181 RIOX2Q8IUF8 465 aa20.3■□□□□ 0.84
CCDC12-210ENST00000604181 CCDC17Q96LX7 622 aa20.3■□□□□ 0.84
CCDC12-210ENST00000604181 MMP19Q99542 508 aa20.3■□□□□ 0.84
CCDC12-210ENST00000604181 SEMA6BQ9H3T3 888 aa20.3■□□□□ 0.84
CCDC12-210ENST00000604181 SLC5A4Q9NY91 659 aa20.3■□□□□ 0.84
CCDC12-210ENST00000604181 ZNF214Q9UL59 606 aaPredicted RBP20.3■□□□□ 0.84
CCDC12-210ENST00000604181 PHF24Q9UPV7 400 aa20.3■□□□□ 0.84
CCDC12-210ENST00000604181 ZBED9Q6R2W3 1325 aa20.29■□□□□ 0.84
CCDC12-210ENST00000604181 VWA5AO00534 786 aa20.29■□□□□ 0.84
CCDC12-210ENST00000604181 ATP5JP18859 108 aa20.29■□□□□ 0.84
CCDC12-210ENST00000604181 FAM83BQ5T0W9 1011 aa20.29■□□□□ 0.84
CCDC12-210ENST00000604181 C1orf53Q5VUE5 145 aa20.29■□□□□ 0.84
CCDC12-210ENST00000604181 HAUS7Q99871 368 aa20.29■□□□□ 0.84
CCDC12-210ENST00000604181 PUS7LQ9H0K6 701 aaKnown RBP20.29■□□□□ 0.84
CCDC12-210ENST00000604181 XPNPEP3Q9NQH7 507 aa20.29■□□□□ 0.84
CCDC12-210ENST00000604181 ZBTB40Q9NUA8 1239 aa20.29■□□□□ 0.84
CCDC12-210ENST00000604181 COG6Q9Y2V7 657 aa20.29■□□□□ 0.84
CCDC12-210ENST00000604181 GREB1LQ9C091 1923 aaPredicted RBP20.29■□□□□ 0.84
CCDC12-210ENST00000604181 SLC25A27O95847 323 aa20.28■□□□□ 0.84
CCDC12-210ENST00000604181 ZNF865P0CJ78 1059 aaPredicted RBP20.28■□□□□ 0.84
CCDC12-210ENST00000604181 CTR9Q6PD62 1173 aa20.28■□□□□ 0.84
CCDC12-210ENST00000604181 RPAP2Q8IXW5 612 aaPredicted RBP20.28■□□□□ 0.84
CCDC12-210ENST00000604181 MIER1Q8N108 512 aa20.28■□□□□ 0.84
CCDC12-210ENST00000604181 NUP88Q99567 741 aaPredicted RBP20.28■□□□□ 0.84
CCDC12-210ENST00000604181 TINF2Q9BSI4 451 aa20.28■□□□□ 0.84
CCDC12-210ENST00000604181 SH2D4AQ9H788 454 aa20.28■□□□□ 0.84
CCDC12-210ENST00000604181 PPP1R9AQ9ULJ8 1098 aa20.28■□□□□ 0.84
CCDC12-210ENST00000604181 RARBP10826 455 aa20.27■□□□□ 0.84
CCDC12-210ENST00000604181 STAT3P40763 770 aa20.27■□□□□ 0.84
CCDC12-210ENST00000604181 MYLIPQ8WY64 445 aa20.27■□□□□ 0.84
CCDC12-210ENST00000604181 SLC4A4Q9Y6R1 1079 aa20.27■□□□□ 0.84
CCDC12-210ENST00000604181 RAB11FIP3O75154 756 aa20.26■□□□□ 0.83
CCDC12-210ENST00000604181 IRX5P78411 483 aaPredicted RBP20.26■□□□□ 0.83
CCDC12-210ENST00000604181 UBE3CQ15386 1083 aa20.26■□□□□ 0.83
CCDC12-210ENST00000604181 KANSL2Q9H9L4 492 aa20.26■□□□□ 0.83
CCDC12-210ENST00000604181 NRBP1Q9UHY1 535 aa20.26■□□□□ 0.83
CCDC12-210ENST00000604181 ROBO3Q96MS0 1386 aa20.25■□□□□ 0.83
CCDC12-210ENST00000604181 A0A1W2PQ45 241 aaPredicted RBP20.25■□□□□ 0.83
CCDC12-210ENST00000604181 A0A1W2PQY0 241 aa20.25■□□□□ 0.83
CCDC12-210ENST00000604181 RAD21O60216 631 aa20.25■□□□□ 0.83
CCDC12-210ENST00000604181 ADAMTS4O75173 837 aa20.25■□□□□ 0.83
CCDC12-210ENST00000604181 CLTBP09497 229 aa20.25■□□□□ 0.83
CCDC12-210ENST00000604181 SMAD3P84022 425 aaKnown RBP20.25■□□□□ 0.83
CCDC12-210ENST00000604181 KCTD2Q14681 263 aa20.25■□□□□ 0.83
CCDC12-210ENST00000604181 STK11IPQ8N1F8 1099 aa20.25■□□□□ 0.83
CCDC12-210ENST00000604181 MAFAQ8NHW3 353 aaPredicted RBP20.25■□□□□ 0.83
CCDC12-210ENST00000604181 RIPK3Q9Y572 518 aa20.25■□□□□ 0.83
CCDC12-210ENST00000604181 SMARCA5O60264 1052 aaPredicted RBP20.24■□□□□ 0.83
CCDC12-210ENST00000604181 PQBP1O60828 265 aaKnown RBP20.24■□□□□ 0.83
CCDC12-210ENST00000604181 HMMRO75330 724 aa20.24■□□□□ 0.83
CCDC12-210ENST00000604181 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.24■□□□□ 0.834e-12■□□□□ 8.4
CCDC12-210ENST00000604181 DIS3Q9Y2L1 958 aaKnown RBP20.24■□□□□ 0.83
CCDC12-210ENST00000604181 TACC3Q9Y6A5 838 aa20.24■□□□□ 0.83
CCDC12-210ENST00000604181 MCM3APO60318 1980 aa20.24■□□□□ 0.83
CCDC12-210ENST00000604181 MYADML2A6NDP7 307 aa20.23■□□□□ 0.83
CCDC12-210ENST00000604181 KIAA0355O15063 1070 aa20.23■□□□□ 0.83
CCDC12-210ENST00000604181 SNAI1O95863 264 aaPredicted RBP20.23■□□□□ 0.83
CCDC12-210ENST00000604181 RASA1P20936 1047 aa20.23■□□□□ 0.83
CCDC12-210ENST00000604181 MYO9BQ13459 2157 aa20.23■□□□□ 0.83
CCDC12-210ENST00000604181 RNF180Q86T96 592 aa20.23■□□□□ 0.83
CCDC12-210ENST00000604181 GOPCQ9HD26 462 aa20.23■□□□□ 0.83
CCDC12-210ENST00000604181 ADCY6O43306 1168 aa20.22■□□□□ 0.83
CCDC12-210ENST00000604181 AKR1A1P14550 325 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms