RNA–Protein interactions for RNA: ENST00000603844.1

FOCAD-210, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-210ENST00000603844 PTPN23Q9H3S7 1636 aa7.45□□□□□ -1.22
FOCAD-210ENST00000603844 ABCC10Q5T3U5 1492 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 PEX10O60683 326 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 SEMA7AO75326 666 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 PGRP06401 933 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 EGR3Q06889 387 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 NR0B2Q15466 257 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 C19orf44Q9H6X5 657 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 CWC22Q9HCG8 908 aaKnown RBP7.44□□□□□ -1.22
FOCAD-210ENST00000603844 GPATCH2Q9NW75 528 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 DUSP13Q9UII6 198 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 TTC37Q6PGP7 1564 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 ASXL2Q76L83 1435 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 MIA2Q96PC5 1412 aa7.44□□□□□ -1.22
FOCAD-210ENST00000603844 GPATCH8Q9UKJ3 1502 aaKnown RBP7.43□□□□□ -1.22
FOCAD-210ENST00000603844 MYOCOSA0A1B0GUC4 107 aa7.43□□□□□ -1.22
FOCAD-210ENST00000603844 FITM1A5D6W6 292 aa7.43□□□□□ -1.22
FOCAD-210ENST00000603844 ITGAEP38570 1179 aa7.43□□□□□ -1.22
FOCAD-210ENST00000603844 SEPT6Q14141 434 aa7.43□□□□□ -1.22
FOCAD-210ENST00000603844 CEP131Q9UPN4 1083 aa7.43□□□□□ -1.22
FOCAD-210ENST00000603844 PCDHB5Q9Y5E4 795 aa7.43□□□□□ -1.22
FOCAD-210ENST00000603844 TCOF1Q13428 1488 aaKnown RBP7.43□□□□□ -1.22
FOCAD-210ENST00000603844 PREX2Q70Z35 1606 aa7.42□□□□□ -1.22
FOCAD-210ENST00000603844 LMNB1P20700 586 aa7.42□□□□□ -1.22
FOCAD-210ENST00000603844 TIGD5Q53EQ6 642 aa7.42□□□□□ -1.22
FOCAD-210ENST00000603844 ZNF605Q86T29 641 aa7.42□□□□□ -1.22
FOCAD-210ENST00000603844 TSPYL5Q86VY4 417 aaPredicted RBP7.42□□□□□ -1.22
FOCAD-210ENST00000603844 MCATQ8IVS2 390 aaKnown RBP7.42□□□□□ -1.22
FOCAD-210ENST00000603844 DHX38Q92620 1227 aaKnown RBP7.42□□□□□ -1.22
FOCAD-210ENST00000603844 FRMD6Q96NE9 622 aa7.42□□□□□ -1.22
FOCAD-210ENST00000603844 ASB16Q96NS5 453 aa7.42□□□□□ -1.22
FOCAD-210ENST00000603844 ZCCHC4Q9H5U6 513 aa7.42□□□□□ -1.22
FOCAD-210ENST00000603844 CFDP1Q9UEE9 299 aaPredicted RBP7.42□□□□□ -1.22
FOCAD-210ENST00000603844 CAMSAP2Q08AD1 1489 aa7.42□□□□□ -1.22
FOCAD-210ENST00000603844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.42□□□□□ -1.22
FOCAD-210ENST00000603844 CDC42BPAQ5VT25 1732 aa7.41□□□□□ -1.22
FOCAD-210ENST00000603844 MYO5CQ9NQX4 1742 aa7.41□□□□□ -1.22
FOCAD-210ENST00000603844 TEX51A0A1B0GUA7 166 aa7.41□□□□□ -1.22
FOCAD-210ENST00000603844 BMP7P18075 431 aa7.41□□□□□ -1.22
FOCAD-210ENST00000603844 PDE4BQ07343 736 aa7.41□□□□□ -1.22
FOCAD-210ENST00000603844 DTWD2Q8NBA8 298 aa7.41□□□□□ -1.22
FOCAD-210ENST00000603844 INTS4Q96HW7 963 aaKnown RBP7.41□□□□□ -1.22
FOCAD-210ENST00000603844 ZNF552Q9H707 407 aaPredicted RBP7.41□□□□□ -1.22
FOCAD-210ENST00000603844 ADAM30Q9UKF2 790 aa7.41□□□□□ -1.22
FOCAD-210ENST00000603844 YBX2Q9Y2T7 364 aaKnown RBP7.41□□□□□ -1.22
FOCAD-210ENST00000603844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.41□□□□□ -1.22
FOCAD-210ENST00000603844 ARHGAP5Q13017 1502 aa7.41□□□□□ -1.22
FOCAD-210ENST00000603844 CCDC85BQ15834 202 aaPredicted RBP7.4□□□□□ -1.22
FOCAD-210ENST00000603844 AGMOQ6ZNB7 445 aa7.4□□□□□ -1.22
FOCAD-210ENST00000603844 PPP1R13LQ8WUF5 828 aa7.4□□□□□ -1.22
FOCAD-210ENST00000603844 ACSF2Q96CM8 615 aaPredicted RBP7.4□□□□□ -1.22
FOCAD-210ENST00000603844 KCNH3Q9ULD8 1083 aa7.4□□□□□ -1.22
FOCAD-210ENST00000603844 CNOT6Q9ULM6 557 aaKnown RBP7.4□□□□□ -1.22
FOCAD-210ENST00000603844 PCDHA11Q9Y5I1 949 aa7.4□□□□□ -1.22
FOCAD-210ENST00000603844 MAPKBP1O60336 1514 aa7.4□□□□□ -1.22
FOCAD-210ENST00000603844 LTKP29376 864 aa7.39□□□□□ -1.23
FOCAD-210ENST00000603844 SNX17Q15036 470 aa7.39□□□□□ -1.23
FOCAD-210ENST00000603844 ZNF385BQ569K4 471 aa7.39□□□□□ -1.23
FOCAD-210ENST00000603844 TMEM132EQ6IEE7 984 aa7.39□□□□□ -1.23
FOCAD-210ENST00000603844 SPPL2CQ8IUH8 684 aa7.39□□□□□ -1.23
FOCAD-210ENST00000603844 SYTL4Q96C24 671 aaPredicted RBP7.39□□□□□ -1.23
FOCAD-210ENST00000603844 KCNC2Q96PR1 638 aa7.39□□□□□ -1.23
FOCAD-210ENST00000603844 GCM1Q9NP62 436 aa7.39□□□□□ -1.23
FOCAD-210ENST00000603844 ABCA9Q8IUA7 1624 aa7.38□□□□□ -1.23
FOCAD-210ENST00000603844 ZNF644Q9H582 1327 aaPredicted RBP7.38□□□□□ -1.23
FOCAD-210ENST00000603844 A0A0G2JLL6 359 aaPredicted RBP7.38□□□□□ -1.23
FOCAD-210ENST00000603844 FOXD2O60548 495 aaPredicted RBP7.38□□□□□ -1.23
FOCAD-210ENST00000603844 CHRNEQ04844 493 aa7.38□□□□□ -1.23
FOCAD-210ENST00000603844 TCERG1LQ5VWI1 586 aa7.38□□□□□ -1.23
FOCAD-210ENST00000603844 MIR1-1HGQ9H1L0 117 aa7.38□□□□□ -1.23
FOCAD-210ENST00000603844 JAG2Q9Y219 1238 aa7.38□□□□□ -1.23
FOCAD-210ENST00000603844 KCTD3Q9Y597 815 aa7.38□□□□□ -1.23
FOCAD-210ENST00000603844 DNMT1P26358 1616 aaKnown RBP7.38□□□□□ -1.23
FOCAD-210ENST00000603844 SAMD9LQ8IVG5 1584 aa7.37□□□□□ -1.23
FOCAD-210ENST00000603844 PLEKHH2Q8IVE3 1493 aa7.37□□□□□ -1.23
FOCAD-210ENST00000603844 DAPK1P53355 1430 aa7.37□□□□□ -1.23
FOCAD-210ENST00000603844 BRD1O95696 1058 aa7.37□□□□□ -1.23
FOCAD-210ENST00000603844 EIF4BP23588 611 aaKnown RBP7.37□□□□□ -1.23
FOCAD-210ENST00000603844 LIG3P49916 1009 aa7.37□□□□□ -1.23
FOCAD-210ENST00000603844 RPL6Q02878 288 aaKnown RBP7.37□□□□□ -1.23
FOCAD-210ENST00000603844 TSNAXIP1Q2TAA8 658 aa7.37□□□□□ -1.23
FOCAD-210ENST00000603844 MARCH10Q8NA82 808 aaPredicted RBP7.37□□□□□ -1.23
FOCAD-210ENST00000603844 CYB5D2Q8WUJ1 264 aa7.37□□□□□ -1.23
FOCAD-210ENST00000603844 CDC42BPBQ9Y5S2 1711 aa7.37□□□□□ -1.23
FOCAD-210ENST00000603844 ARAP3Q8WWN8 1544 aa7.37□□□□□ -1.23
FOCAD-210ENST00000603844 PLCH2O75038 1416 aa7.36□□□□□ -1.23
FOCAD-210ENST00000603844 RFXAPO00287 272 aa7.36□□□□□ -1.23
FOCAD-210ENST00000603844 PDE6BP35913 854 aa7.36□□□□□ -1.23
FOCAD-210ENST00000603844 TMEM151BQ8IW70 566 aa7.36□□□□□ -1.23
FOCAD-210ENST00000603844 ANKS4BQ8N8V4 417 aa7.36□□□□□ -1.23
FOCAD-210ENST00000603844 RNF141Q8WVD5 230 aa7.36□□□□□ -1.23
FOCAD-210ENST00000603844 GPR160Q9UJ42 338 aa7.36□□□□□ -1.23
FOCAD-210ENST00000603844 SYCP2Q9BX26 1530 aa7.36□□□□□ -1.23
FOCAD-210ENST00000603844 ABCC5O15440 1437 aa7.35□□□□□ -1.23
FOCAD-210ENST00000603844 PTPRKQ15262 1439 aa7.35□□□□□ -1.23
FOCAD-210ENST00000603844 CROCC2H7BZ55 1655 aa7.35□□□□□ -1.23
FOCAD-210ENST00000603844 ARHGEF5Q12774 1597 aa7.35□□□□□ -1.23
FOCAD-210ENST00000603844 LDHBP07195 334 aaKnown RBP7.35□□□□□ -1.23
FOCAD-210ENST00000603844 P4HBP07237 508 aaKnown RBP7.35□□□□□ -1.23
FOCAD-210ENST00000603844 GNA15P30679 374 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms