RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 TRIM39Q9HCM9 518 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 GP6Q9HCN6 339 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 FAM105AQ9NUU6 356 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 SFMBT1Q9UHJ3 866 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 CEP131Q9UPN4 1083 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 AKT3Q9Y243 479 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 THRAP3Q9Y2W1 955 aaKnown RBP5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 ACTL7BQ9Y614 415 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 FAM83GA6ND36 823 aa5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 TBX1O43435 398 aa5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 DNAJC8O75937 253 aaPredicted RBP5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 CELA2BP08218 269 aaPredicted RBP5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 C6orf222P0C671 652 aaPredicted RBP5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 ITGA4P13612 1032 aa5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 POU3F2P20265 443 aaPredicted RBP5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 ANKRD34AQ69YU3 496 aa5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 IGF2-ASQ6U949 168 aa5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 TRIM59Q8IWR1 403 aa5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 C12orf50Q8NA57 414 aaPredicted RBP5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 GSTCDQ8NEC7 633 aa5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 DDX1Q92499 740 aaKnown RBP5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 ASPNQ9BXN1 380 aa5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 MRPL18Q9H0U6 180 aaKnown RBP5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 SSU72Q9NP77 194 aaKnown RBP5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 PCOLCE2Q9UKZ9 415 aa5.7□□□□□ -1.5
AC004542.1-201ENST00000602955 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 KRBA1A5PL33 1030 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 DLX3O60479 287 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 EFCAB14O75071 495 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 NPTXRO95502 500 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 GABREP78334 506 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 MAP4K2Q12851 820 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 WWC2Q6AWC2 1192 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 FDX2Q6P4F2 183 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 CNNM4Q6P4Q7 775 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 LYPD4Q6UWN0 246 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 FMNL3Q8IVF7 1028 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 ATL2Q8NHH9 583 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 SLC7A14Q8TBB6 771 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 XAGE3Q8WTP9 111 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 BTN2A2Q8WVV5 523 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 FBXL18Q96ME1 805 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 CCDC140Q96MF4 163 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 CGGBP1Q9UFW8 167 aaPredicted RBP5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 FHOD1Q9Y613 1164 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 EID1Q9Y6B2 187 aa5.69□□□□□ -1.5
AC004542.1-201ENST00000602955 EYA4O95677 639 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 ELNP15502 786 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 CPEP16870 476 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 ETV3P41162 512 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 ZNF445P59923 1031 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 NBPF9Q3BBW0 867 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 LETMD1Q6P1Q0 360 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 DDX46Q7L014 1031 aaKnown RBP5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 BRAPQ7Z569 592 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 AHI1Q8N157 1196 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 TMEM130Q8N3G9 435 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 ADCY4Q8NFM4 1077 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 RIN3Q8TB24 985 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 SYTL5Q8TDW5 730 aaPredicted RBP5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 RNF141Q8WVD5 230 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 TRIM11Q96F44 468 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 ACSS3Q9H6R3 686 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 SLC52A2Q9HAB3 445 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 PRR13Q9NZ81 148 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 NDOR1Q9UHB4 597 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 DIS3Q9Y2L1 958 aaKnown RBP5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 PCDHB12Q9Y5F1 795 aa5.68□□□□□ -1.5
AC004542.1-201ENST00000602955 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 SLITRK5O94991 958 aa5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 ASLP04424 464 aa5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 GFRA1P56159 465 aa5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 GRB10Q13322 594 aa5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 DHCR24Q15392 516 aa5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 GTF2IRD2BQ6EKJ0 949 aa5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 STRA8Q7Z7C7 330 aa5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 GTF2IRD2Q86UP8 949 aa5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 LEO1Q8WVC0 666 aaPredicted RBP5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 KCTD13Q8WZ19 329 aa5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 PTPRN2Q92932 1015 aa5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 MIPEPQ99797 713 aa5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 TNPO3Q9Y5L0 923 aaKnown RBP5.67□□□□□ -1.5
AC004542.1-201ENST00000602955 F8W735 103 aaPredicted RBP5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 KCNH1O95259 989 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 SCG5P05408 212 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 HOXC12P31275 282 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 EPHB1P54762 984 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 FAM50AQ14320 339 aaKnown RBP5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 NTRK3Q16288 839 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 NOL9Q5SY16 702 aaKnown RBP5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 LINC00114Q6XXX2 140 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 MAMDC2Q7Z304 686 aaPredicted RBP5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 NECAB2Q7Z6G3 386 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 C1orf159Q96HA4 380 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 PSMG3-AS1Q96PY0 264 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 NKX2-4Q9H2Z4 354 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 RRAGCQ9HB90 399 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 SLC52A1Q9NWF4 448 aa5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 GEMIN8Q9NWZ8 242 aaKnown RBP5.66□□□□□ -1.5
AC004542.1-201ENST00000602955 TCEAL9Q9UHQ7 104 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms