RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 GIMAP6Q6P9H5 292 aa25.37■■□□□ 1.65
PPFIA3-209ENST00000602783 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.37■■□□□ 1.65
PPFIA3-209ENST00000602783 MKNK2Q9HBH9 465 aa25.37■■□□□ 1.65
PPFIA3-209ENST00000602783 FBXO28Q9NVF7 368 aa25.37■■□□□ 1.65
PPFIA3-209ENST00000602783 ZFYP08048 801 aaPredicted RBP25.36■■□□□ 1.65
PPFIA3-209ENST00000602783 RASA1P20936 1047 aa25.36■■□□□ 1.65
PPFIA3-209ENST00000602783 MAGEA10P43363 369 aaPredicted RBP25.36■■□□□ 1.65
PPFIA3-209ENST00000602783 ABRAQ8N0Z2 381 aa25.36■■□□□ 1.65
PPFIA3-209ENST00000602783 ADAMTS5Q9UNA0 930 aa25.36■■□□□ 1.65
PPFIA3-209ENST00000602783 A0A0G2JMZ2 1700 aa25.36■■□□□ 1.65
PPFIA3-209ENST00000602783 GPAA1O43292 621 aa25.35■■□□□ 1.65
PPFIA3-209ENST00000602783 SLC25A27O95847 323 aa25.35■■□□□ 1.65
PPFIA3-209ENST00000602783 FCER1AP12319 257 aa25.35■■□□□ 1.65
PPFIA3-209ENST00000602783 FAM83BQ5T0W9 1011 aa25.35■■□□□ 1.65
PPFIA3-209ENST00000602783 PI4K2BQ8TCG2 481 aa25.35■■□□□ 1.65
PPFIA3-209ENST00000602783 GREB1LQ9C091 1923 aaPredicted RBP25.35■■□□□ 1.65
PPFIA3-209ENST00000602783 ERC2O15083 957 aa25.34■■□□□ 1.65
PPFIA3-209ENST00000602783 APPP05067 770 aa25.34■■□□□ 1.65
PPFIA3-209ENST00000602783 PRAMEF19Q5SWL8 479 aa25.34■■□□□ 1.65
PPFIA3-209ENST00000602783 LRCH3Q96II8 777 aa25.34■■□□□ 1.65
PPFIA3-209ENST00000602783 PPP1R9AQ9ULJ8 1098 aa25.34■■□□□ 1.65
PPFIA3-209ENST00000602783 PARP14Q460N5 1801 aa25.33■■□□□ 1.65
PPFIA3-209ENST00000602783 ZNF236Q9UL36 1845 aa25.33■■□□□ 1.65
PPFIA3-209ENST00000602783 M0R2C6 588 aa25.33■■□□□ 1.65
PPFIA3-209ENST00000602783 VWA5AO00534 786 aa25.33■■□□□ 1.65
PPFIA3-209ENST00000602783 GNAT2P19087 354 aa25.33■■□□□ 1.65
PPFIA3-209ENST00000602783 MX1P20591 662 aa25.33■■□□□ 1.65
PPFIA3-209ENST00000602783 TDO2P48775 406 aa25.33■■□□□ 1.65
PPFIA3-209ENST00000602783 ANO1Q5XXA6 986 aa25.33■■□□□ 1.65
PPFIA3-209ENST00000602783 RIOX2Q8IUF8 465 aa25.33■■□□□ 1.65
PPFIA3-209ENST00000602783 MAML3Q96JK9 1138 aa25.33■■□□□ 1.65
PPFIA3-209ENST00000602783 EPB41L4AQ9HCS5 686 aaPredicted RBP25.33■■□□□ 1.65
PPFIA3-209ENST00000602783 FRMPD3Q5JV73 1810 aa25.33■■□□□ 1.64
PPFIA3-209ENST00000602783 DNM1LO00429 736 aa25.32■■□□□ 1.64
PPFIA3-209ENST00000602783 STAT3P40763 770 aa25.32■■□□□ 1.64
PPFIA3-209ENST00000602783 LRRFIP1Q32MZ4 808 aaKnown RBP25.32■■□□□ 1.64
PPFIA3-209ENST00000602783 GJC2Q5T442 439 aaPredicted RBP25.32■■□□□ 1.64
PPFIA3-209ENST00000602783 MMP19Q99542 508 aa25.32■■□□□ 1.64
PPFIA3-209ENST00000602783 UBE2OQ9C0C9 1292 aaKnown RBP25.32■■□□□ 1.64
PPFIA3-209ENST00000602783 NYAP2Q9P242 653 aa25.32■■□□□ 1.64
PPFIA3-209ENST00000602783 LAMA3Q16787 3333 aa25.32■■□□□ 1.64
PPFIA3-209ENST00000602783 PATL2C9JE40 543 aaKnown RBP25.31■■□□□ 1.64
PPFIA3-209ENST00000602783 SEPT4O43236 478 aa25.31■■□□□ 1.64
PPFIA3-209ENST00000602783 ATN1P54259 1190 aaPredicted RBP25.31■■□□□ 1.64
PPFIA3-209ENST00000602783 ZNF444Q8N0Y2 327 aaPredicted RBP25.31■■□□□ 1.64
PPFIA3-209ENST00000602783 ARRDC4Q8NCT1 418 aa25.31■■□□□ 1.64
PPFIA3-209ENST00000602783 NUP88Q99567 741 aaPredicted RBP25.31■■□□□ 1.64
PPFIA3-209ENST00000602783 SALL3Q9BXA9 1300 aa25.31■■□□□ 1.64
PPFIA3-209ENST00000602783 ROBO3Q96MS0 1386 aa25.31■■□□□ 1.64
PPFIA3-209ENST00000602783 ZNFX1Q9P2E3 1918 aaKnown RBP25.3■■□□□ 1.64
PPFIA3-209ENST00000602783 F5H6K3 240 aa25.3■■□□□ 1.64
PPFIA3-209ENST00000602783 PRDM1O75626 825 aa25.3■■□□□ 1.64
PPFIA3-209ENST00000602783 PGK2P07205 417 aa25.3■■□□□ 1.64
PPFIA3-209ENST00000602783 KLRC3Q07444 240 aa25.3■■□□□ 1.64
PPFIA3-209ENST00000602783 CLIP2Q9UDT6 1046 aa25.3■■□□□ 1.64
PPFIA3-209ENST00000602783 ZBTB47Q9UFB7 747 aaPredicted RBP25.3■■□□□ 1.64
PPFIA3-209ENST00000602783 ZNF214Q9UL59 606 aaPredicted RBP25.3■■□□□ 1.64
PPFIA3-209ENST00000602783 COL11A1P12107 1806 aaPredicted RBP25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 MYCNP04198 464 aaPredicted RBP25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 HDAC1Q13547 482 aaPredicted RBP25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 KCTD2Q14681 263 aa25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 ANKRD45Q5TZF3 282 aa25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 IFNL3Q8IZI9 196 aa25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 TDHQ8IZJ6 230 aa25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 REPS2Q8NFH8 660 aa25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 SEC62Q99442 399 aaKnown RBP25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 SLF1Q9BQI6 1058 aa25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 FSD1Q9BTV5 496 aa25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 ZNF287Q9HBT7 754 aa25.29■■□□□ 1.64
PPFIA3-209ENST00000602783 DNAH12Q6ZR08 3092 aa25.28■■□□□ 1.64
PPFIA3-209ENST00000602783 MDM2Q00987 491 aaPredicted RBP25.28■■□□□ 1.64
PPFIA3-209ENST00000602783 KBTBD13C9JR72 458 aa25.27■■□□□ 1.64
PPFIA3-209ENST00000602783 NDUFB10O96000 172 aa25.27■■□□□ 1.64
PPFIA3-209ENST00000602783 COPB2P35606 906 aa25.27■■□□□ 1.64
PPFIA3-209ENST00000602783 NACAP1Q9BZK3 213 aa25.27■■□□□ 1.64
PPFIA3-209ENST00000602783 IGKV6D-41A0A0C4DH26 115 aa25.26■■□□□ 1.63
PPFIA3-209ENST00000602783 RTP1P59025 263 aa25.26■■□□□ 1.63
PPFIA3-209ENST00000602783 ZNF792Q3KQV3 632 aa25.26■■□□□ 1.63
PPFIA3-209ENST00000602783 LRIT3Q3SXY7 679 aa25.26■■□□□ 1.63
PPFIA3-209ENST00000602783 PRPF38AQ8NAV1 312 aaKnown RBP25.26■■□□□ 1.63
PPFIA3-209ENST00000602783 DIS3Q9Y2L1 958 aaKnown RBP25.26■■□□□ 1.63
PPFIA3-209ENST00000602783 MYH4Q9Y623 1939 aa25.25■■□□□ 1.63
PPFIA3-209ENST00000602783 MKL1Q969V6 931 aa25.25■■□□□ 1.63
PPFIA3-209ENST00000602783 CEP95Q96GE4 821 aa25.25■■□□□ 1.63
PPFIA3-209ENST00000602783 TINF2Q9BSI4 451 aa25.25■■□□□ 1.63
PPFIA3-209ENST00000602783 MTMR4Q9NYA4 1195 aa25.25■■□□□ 1.63
PPFIA3-209ENST00000602783 SMCHD1A6NHR9 2005 aa25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 SLC4A3P48751 1232 aa25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 AAMPQ13685 434 aa25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 LRRC41Q15345 812 aa25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 FAM47AQ5JRC9 791 aa25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 ZMYM1Q5SVZ6 1142 aa25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 SNRNP48Q6IEG0 339 aaKnown RBP25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 SLC39A5Q6ZMH5 540 aa25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 TEX13BQ9BXU2 312 aa25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 NAPBQ9H115 298 aa25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 NRBP1Q9UHY1 535 aa25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 ATP11BQ9Y2G3 1177 aa25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 CTDP1Q9Y5B0 961 aaPredicted RBP25.24■■□□□ 1.63
PPFIA3-209ENST00000602783 ZBED4O75132 1171 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms