RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 ATG4CQ96DT6 458 aa15.11■□□□□ 0.01
USE1-209ENST00000601592 ZKSCAN3Q9BRR0 538 aa15.11■□□□□ 0.01
USE1-209ENST00000601592 ANO2Q9NQ90 1003 aa15.11■□□□□ 0.01
USE1-209ENST00000601592 HOXC10Q9NYD6 342 aa15.11■□□□□ 0.01
USE1-209ENST00000601592 GABRQQ9UN88 632 aa15.11■□□□□ 0.01
USE1-209ENST00000601592 KDM4AO75164 1064 aa15.1■□□□□ 0.01
USE1-209ENST00000601592 DSG3P32926 999 aa15.1■□□□□ 0.01
USE1-209ENST00000601592 CCNA1P78396 465 aa15.1■□□□□ 0.01
USE1-209ENST00000601592 IKQ13123 557 aaPredicted RBP15.1■□□□□ 0.01
USE1-209ENST00000601592 Q3C1V9 767 aa15.1■□□□□ 0.01
USE1-209ENST00000601592 GMCL1P1Q8NEA9 526 aa15.1■□□□□ 0.01
USE1-209ENST00000601592 MKL1Q969V6 931 aa15.1■□□□□ 0.01
USE1-209ENST00000601592 PORCNQ9H237 461 aa15.1■□□□□ 0.01
USE1-209ENST00000601592 BTBD7Q9P203 1132 aa15.1■□□□□ 0.01
USE1-209ENST00000601592 RBM8AQ9Y5S9 174 aaKnown RBP15.1■□□□□ 0.01
USE1-209ENST00000601592 CNMDO75829 334 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 MYCP01106 439 aaPredicted RBP15.09■□□□□ 0.01
USE1-209ENST00000601592 FLT3LGP49771 235 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 TRDNQ13061 729 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 CCDC96Q2M329 555 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 POTEEQ6S8J3 1075 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 LBX2Q6XYB7 198 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 IQCA1Q86XH1 822 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 NKX2-3Q8TAU0 364 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 SH3TC2Q8TF17 1288 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 SLF1Q9BQI6 1058 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 KRT23Q9C075 422 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 CNNM2Q9H8M5 875 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 SYNPO2Q9UMS6 1093 aa15.09■□□□□ 0.01
USE1-209ENST00000601592 CTDP1Q9Y5B0 961 aaPredicted RBP15.09■□□□□ 0.01
USE1-209ENST00000601592 ZNFX1Q9P2E3 1918 aaKnown RBP15.09■□□□□ 0.01
USE1-209ENST00000601592 CYP21A2P08686 494 aa15.08■□□□□ 0
USE1-209ENST00000601592 TOP1P11387 765 aaKnown RBP15.08■□□□□ 0
USE1-209ENST00000601592 BMP3P12645 472 aa15.08■□□□□ 0
USE1-209ENST00000601592 MCCP23508 829 aa15.08■□□□□ 0
USE1-209ENST00000601592 MAPK4P31152 587 aa15.08■□□□□ 0
USE1-209ENST00000601592 SLC1A4P43007 532 aa15.08■□□□□ 0
USE1-209ENST00000601592 RASGRP2Q7LDG7 609 aa15.08■□□□□ 0
USE1-209ENST00000601592 NBPF11Q86T75 865 aa15.08■□□□□ 0
USE1-209ENST00000601592 MB21D1Q8N884 522 aa15.08■□□□□ 0
USE1-209ENST00000601592 KIFC2Q96AC6 838 aa15.08■□□□□ 0
USE1-209ENST00000601592 BIN2Q9UBW5 565 aaPredicted RBP15.08■□□□□ 0
USE1-209ENST00000601592 PPP1R9AQ9ULJ8 1098 aa15.08■□□□□ 0
USE1-209ENST00000601592 HTTP42858 3142 aa15.08■□□□□ 0
USE1-209ENST00000601592 SOX10P56693 466 aa15.07■□□□□ 0
USE1-209ENST00000601592 KCTD1Q719H9 257 aa15.07■□□□□ 0
USE1-209ENST00000601592 GPR142Q7Z601 462 aa15.07■□□□□ 0
USE1-209ENST00000601592 PLEKHH3Q7Z736 793 aa15.07■□□□□ 0
USE1-209ENST00000601592 RALYLQ86SE5 291 aaKnown RBP15.07■□□□□ 0
USE1-209ENST00000601592 MAP4K1Q92918 833 aa15.07■□□□□ 0
USE1-209ENST00000601592 TMEM47Q9BQJ4 181 aa15.07■□□□□ 0
USE1-209ENST00000601592 UBAC1Q9BSL1 405 aa15.07■□□□□ 0
USE1-209ENST00000601592 LSG1Q9H089 658 aaKnown RBP15.07■□□□□ 0
USE1-209ENST00000601592 SPATC1LQ9H0A9 340 aa15.07■□□□□ 0
USE1-209ENST00000601592 TCP11L1Q9NUJ3 509 aa15.07■□□□□ 0
USE1-209ENST00000601592 ZSWIM5Q9P217 1185 aa15.07■□□□□ 0
USE1-209ENST00000601592 IVNS1ABPQ9Y6Y0 642 aa15.07■□□□□ 0
USE1-209ENST00000601592 MYH6P13533 1939 aa15.06■□□□□ 0
USE1-209ENST00000601592 TMEM232C9JQI7 657 aa15.06■□□□□ 0
USE1-209ENST00000601592 ADCY3O60266 1144 aa15.06■□□□□ 0
USE1-209ENST00000601592 ELNP15502 786 aa15.06■□□□□ 0
USE1-209ENST00000601592 GRK4P32298 578 aa15.06■□□□□ 0
USE1-209ENST00000601592 SLC4A3P48751 1232 aa15.06■□□□□ 0
USE1-209ENST00000601592 STAT2P52630 851 aa15.06■□□□□ 0
USE1-209ENST00000601592 NCAPG2Q86XI2 1143 aa15.06■□□□□ 0
USE1-209ENST00000601592 SOCS4Q8WXH5 440 aa15.06■□□□□ 0
USE1-209ENST00000601592 GMCL1Q96IK5 515 aa15.06■□□□□ 0
USE1-209ENST00000601592 NUDT12Q9BQG2 462 aa15.06■□□□□ 0
USE1-209ENST00000601592 MOV10L1Q9BXT6 1211 aaKnown RBP15.06■□□□□ 0
USE1-209ENST00000601592 FEM1BQ9UK73 627 aa15.06■□□□□ 0
USE1-209ENST00000601592 TAF6LQ9Y6J9 622 aa15.06■□□□□ 0
USE1-209ENST00000601592 PLXNA1Q9UIW2 1896 aa15.06■□□□□ 0
USE1-209ENST00000601592 E7EWF7 191 aa15.05■□□□□ -0
USE1-209ENST00000601592 VWA5AO00534 786 aa15.05■□□□□ -0
USE1-209ENST00000601592 CYP2B6P20813 491 aa15.05■□□□□ -0
USE1-209ENST00000601592 NT5C2P49902 561 aa15.05■□□□□ -0
USE1-209ENST00000601592 TMEM132BQ14DG7 1078 aa15.05■□□□□ -0
USE1-209ENST00000601592 CCDC178Q5BJE1 867 aa15.05■□□□□ -0
USE1-209ENST00000601592 RCSD1Q6JBY9 416 aa15.05■□□□□ -0
USE1-209ENST00000601592 PRPF38AQ8NAV1 312 aaKnown RBP15.05■□□□□ -0
USE1-209ENST00000601592 SLAIN1Q8ND83 568 aa15.05■□□□□ -0
USE1-209ENST00000601592 DCAF4Q8WV16 495 aa15.05■□□□□ -0
USE1-209ENST00000601592 ARMC5Q96C12 935 aa15.05■□□□□ -0
USE1-209ENST00000601592 ZSCAN10Q96SZ4 725 aaPredicted RBP15.05■□□□□ -0
USE1-209ENST00000601592 KAT14Q9H8E8 782 aa15.05■□□□□ -0
USE1-209ENST00000601592 TNKSO95271 1327 aa15.05■□□□□ -0
USE1-209ENST00000601592 FRMPD2Q68DX3 1309 aaPredicted RBP15.05■□□□□ -0
USE1-209ENST00000601592 KIAA0100Q14667 2235 aaKnown RBP15.05■□□□□ -0
USE1-209ENST00000601592 CENPFP49454 3210 aa15.04■□□□□ -0
USE1-209ENST00000601592 RBBP6Q7Z6E9 1792 aaKnown RBP15.04■□□□□ -0
USE1-209ENST00000601592 ZBED4O75132 1171 aa15.04■□□□□ -0
USE1-209ENST00000601592 ERCC3P19447 782 aa15.04■□□□□ -0
USE1-209ENST00000601592 NOVP48745 357 aa15.04■□□□□ -0
USE1-209ENST00000601592 CYB5R4Q7L1T6 521 aa15.04■□□□□ -0
USE1-209ENST00000601592 FAM160B2Q86V87 743 aa15.04■□□□□ -0
USE1-209ENST00000601592 CPXCR1Q8N123 301 aa15.04■□□□□ -0
USE1-209ENST00000601592 NCOA7Q8NI08 942 aa15.04■□□□□ -0
USE1-209ENST00000601592 CHURC1Q8WUH1 139 aa15.04■□□□□ -0
USE1-209ENST00000601592 TTC14Q96N46 770 aa15.04■□□□□ -0
USE1-209ENST00000601592 GPCPD1Q9NPB8 672 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms