RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 SSBP4Q9BWG4 385 aaPredicted RBP6.61□□□□□ -1.35
VRK3-222ENST00000601324 FAM105AQ9NUU6 356 aa6.61□□□□□ -1.35
VRK3-222ENST00000601324 TNS1Q9HBL0 1735 aaKnown RBP6.6□□□□□ -1.35
VRK3-222ENST00000601324 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.6□□□□□ -1.35
VRK3-222ENST00000601324 PRAMEF27A3QJZ7 478 aa6.6□□□□□ -1.35
VRK3-222ENST00000601324 FANCGO15287 622 aa6.6□□□□□ -1.35
VRK3-222ENST00000601324 COL9A2Q14055 689 aaPredicted RBP6.6□□□□□ -1.35
VRK3-222ENST00000601324 ZBTB37Q5TC79 503 aa6.6□□□□□ -1.35
VRK3-222ENST00000601324 SLC43A3Q8NBI5 491 aa6.6□□□□□ -1.35
VRK3-222ENST00000601324 UTP4Q969X6 686 aaKnown RBP6.6□□□□□ -1.35
VRK3-222ENST00000601324 MYRFLQ96LU7 910 aa6.6□□□□□ -1.35
VRK3-222ENST00000601324 PIDD1Q9HB75 910 aa6.6□□□□□ -1.35
VRK3-222ENST00000601324 PICK1Q9NRD5 415 aa6.6□□□□□ -1.35
VRK3-222ENST00000601324 E9PCH4 1651 aa6.6□□□□□ -1.35
VRK3-222ENST00000601324 IQGAP3Q86VI3 1631 aa6.6□□□□□ -1.35
VRK3-222ENST00000601324 SPATA31A3Q5VYP0 1347 aa6.59□□□□□ -1.35
VRK3-222ENST00000601324 NPHP3Q7Z494 1330 aa6.59□□□□□ -1.35
VRK3-222ENST00000601324 USP32Q8NFA0 1604 aa6.59□□□□□ -1.35
VRK3-222ENST00000601324 ITGB2P05107 769 aa6.59□□□□□ -1.35
VRK3-222ENST00000601324 USP11P51784 963 aa6.59□□□□□ -1.35
VRK3-222ENST00000601324 TTLL4Q14679 1199 aa6.59□□□□□ -1.35
VRK3-222ENST00000601324 EZH2Q15910 746 aaKnown RBP6.59□□□□□ -1.35
VRK3-222ENST00000601324 REXO1Q8N1G1 1221 aaKnown RBP6.59□□□□□ -1.35
VRK3-222ENST00000601324 ARMC10Q8N2F6 343 aa6.59□□□□□ -1.35
VRK3-222ENST00000601324 YIPF2Q9BWQ6 316 aa6.59□□□□□ -1.35
VRK3-222ENST00000601324 WNT10AQ9GZT5 417 aa6.59□□□□□ -1.35
VRK3-222ENST00000601324 BRMS1Q9HCU9 246 aa6.59□□□□□ -1.35
VRK3-222ENST00000601324 POLR3KQ9Y2Y1 108 aaPredicted RBP6.59□□□□□ -1.35
VRK3-222ENST00000601324 ANKRD50Q9ULJ7 1429 aa6.59□□□□□ -1.36
VRK3-222ENST00000601324 NINLQ9Y2I6 1382 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 PRR36Q9H6K5 1346 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 DHX15O43143 795 aaKnown RBP6.58□□□□□ -1.36
VRK3-222ENST00000601324 GRIN3BO60391 1043 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 NEFMP07197 916 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 BMP3P12645 472 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 HCLS1P14317 486 aaPredicted RBP6.58□□□□□ -1.36
VRK3-222ENST00000601324 RAB6AP20340 208 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 GRK4P32298 578 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 NTF4P34130 210 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 SOX9P48436 509 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 ZNF165P49910 485 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 C1QTNF8P60827 252 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 ETF1P62495 437 aaKnown RBP6.58□□□□□ -1.36
VRK3-222ENST00000601324 PDE4BQ07343 736 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 VPS37DQ86XT2 251 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 ZNF507Q8TCN5 953 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 ISL2Q96A47 359 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 SEC16BQ96JE7 1060 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 ACSS3Q9H6R3 686 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 GINM1Q9NU53 330 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 NEXMIFQ5QGS0 1516 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 UTRNP46939 3433 aa6.58□□□□□ -1.36
VRK3-222ENST00000601324 CDC42BPGQ6DT37 1551 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 RGPD1P0DJD0 1748 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 NWD2Q9ULI1 1742 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 RNGTTO60942 597 aaKnown RBP6.57□□□□□ -1.36
VRK3-222ENST00000601324 ATE1O95260 518 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 ATF4P18848 351 aaPredicted RBP6.57□□□□□ -1.36
VRK3-222ENST00000601324 MCM4P33991 863 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 ARID5AQ03989 594 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 SGO2Q562F6 1265 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 CDPF1Q6NVV7 123 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 FAM20CQ8IXL6 584 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 SMYD4Q8IYR2 804 aaPredicted RBP6.57□□□□□ -1.36
VRK3-222ENST00000601324 KCT2Q8NC54 265 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 FBLIM1Q8WUP2 373 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 EZH1Q92800 747 aaPredicted RBP6.57□□□□□ -1.36
VRK3-222ENST00000601324 TP53INP1Q96A56 240 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 GMLQ99445 158 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 EHMT1Q9H9B1 1298 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 ADAM30Q9UKF2 790 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 EFR3BQ9Y2G0 817 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 PCDHB14Q9Y5E9 798 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 CORINQ9Y5Q5 1042 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 THSD7AQ9UPZ6 1657 aa6.57□□□□□ -1.36
VRK3-222ENST00000601324 RREB1Q92766 1687 aa6.56□□□□□ -1.36
VRK3-222ENST00000601324 CAMTA1Q9Y6Y1 1673 aa6.56□□□□□ -1.36
VRK3-222ENST00000601324 FAM83GA6ND36 823 aa6.56□□□□□ -1.36
VRK3-222ENST00000601324 HTR3BO95264 441 aa6.56□□□□□ -1.36
VRK3-222ENST00000601324 PGRP06401 933 aa6.56□□□□□ -1.36
VRK3-222ENST00000601324 MAP4P27816 1152 aaKnown RBP6.56□□□□□ -1.36
VRK3-222ENST00000601324 NASPP49321 788 aaPredicted RBP6.56□□□□□ -1.36
VRK3-222ENST00000601324 HFM1A2PYH4 1435 aa6.56□□□□□ -1.36
VRK3-222ENST00000601324 VPS8Q8N3P4 1428 aa6.56□□□□□ -1.36
VRK3-222ENST00000601324 NRAPQ86VF7 1730 aa6.56□□□□□ -1.36
VRK3-222ENST00000601324 PARD3Q8TEW0 1356 aa6.56□□□□□ -1.36
VRK3-222ENST00000601324 PLCH1Q4KWH8 1693 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 PLCG1P19174 1290 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 CLCQ05315 142 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 MAP7Q14244 749 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 TMEM201Q5SNT2 666 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 GK5Q6ZS86 529 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 CDC37L1Q7L3B6 337 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 HID1Q8IV36 788 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 KCNF1Q9H3M0 494 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 SEMA6CQ9H3T2 930 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 TPSG1Q9NRR2 321 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 REV1Q9UBZ9 1251 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 PCOLCE2Q9UKZ9 415 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 STRIP2Q9ULQ0 834 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms