RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 STAP2Q9UGK3 403 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 OGDHLQ9ULD0 1010 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 COLQQ9Y215 455 aaPredicted RBP13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 RLFQ13129 1914 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 STRNO43815 780 aa13.8□□□□□ -0.2
SOX2-OT-233ENST00000600778 EVI5O60447 810 aa13.8□□□□□ -0.2
SOX2-OT-233ENST00000600778 HOXC6P09630 235 aa13.8□□□□□ -0.2
SOX2-OT-233ENST00000600778 ADORA2AP29274 412 aa13.8□□□□□ -0.2
SOX2-OT-233ENST00000600778 TMEM132BQ14DG7 1078 aa13.8□□□□□ -0.2
SOX2-OT-233ENST00000600778 B4GALNT3Q6L9W6 998 aa13.8□□□□□ -0.2
SOX2-OT-233ENST00000600778 SHCBP1Q8NEM2 672 aa13.8□□□□□ -0.2
SOX2-OT-233ENST00000600778 EVI5LQ96CN4 794 aa13.8□□□□□ -0.2
SOX2-OT-233ENST00000600778 LNPKQ9C0E8 428 aa13.8□□□□□ -0.2
SOX2-OT-233ENST00000600778 NYAP2Q9P242 653 aa13.8□□□□□ -0.2
SOX2-OT-233ENST00000600778 NR2E3Q9Y5X4 410 aa13.8□□□□□ -0.2
SOX2-OT-233ENST00000600778 IGKV6D-41A0A0C4DH26 115 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 F5H6K3 240 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 IGHDP01880 384 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 CYP2C19P33261 490 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 MNX1P50219 401 aaPredicted RBP13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 PDE4BQ07343 736 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 KLRC3Q07444 240 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 PPARAQ07869 468 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 FAM47AQ5JRC9 791 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 LHX8Q68G74 356 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 NUP88Q99567 741 aaPredicted RBP13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 NBPF3Q9H094 633 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 MROH8Q9H579 483 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 PPP1R9AQ9ULJ8 1098 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 ADAMTS5Q9UNA0 930 aa13.79□□□□□ -0.2
SOX2-OT-233ENST00000600778 A0A0G2JMZ2 1700 aa13.78□□□□□ -0.2
SOX2-OT-233ENST00000600778 GREB1LQ9C091 1923 aaPredicted RBP13.78□□□□□ -0.2
SOX2-OT-233ENST00000600778 VWA5AO00534 786 aa13.78□□□□□ -0.2
SOX2-OT-233ENST00000600778 COBLO75128 1261 aa13.78□□□□□ -0.2
SOX2-OT-233ENST00000600778 SLC25A27O95847 323 aa13.78□□□□□ -0.2
SOX2-OT-233ENST00000600778 SLC3A2P08195 630 aaKnown RBP13.78□□□□□ -0.2
SOX2-OT-233ENST00000600778 TSPY3P0CV98 308 aa13.78□□□□□ -0.2
SOX2-OT-233ENST00000600778 TSPY8P0CW00 308 aa13.78□□□□□ -0.2
SOX2-OT-233ENST00000600778 CNGA1P29973 690 aa13.78□□□□□ -0.2
SOX2-OT-233ENST00000600778 CEP95Q96GE4 821 aa13.78□□□□□ -0.2
SOX2-OT-233ENST00000600778 C11orf49Q9H6J7 331 aa13.78□□□□□ -0.2
SOX2-OT-233ENST00000600778 TRIM6-TRIM34B2RNG4 842 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 FOXP2O15409 715 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 NDUFB10O96000 172 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 FCER1AP12319 257 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 STAT3P40763 770 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 TFAP4Q01664 338 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 CTDSPL2Q05D32 466 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 VPS53Q5VIR6 699 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 SMC5Q8IY18 1101 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 MKL1Q969V6 931 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 HELLSQ9NRZ9 838 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 SLC5A4Q9NY91 659 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 MTMR4Q9NYA4 1195 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 DNAH12Q6ZR08 3092 aa13.77□□□□□ -0.21
SOX2-OT-233ENST00000600778 PARP14Q460N5 1801 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 TTLL1O95922 423 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 OLFML2BQ68BL8 750 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 RIOX2Q8IUF8 465 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 C7orf61Q8IZ16 206 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 ABRAQ8N0Z2 381 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 LRRC47Q8N1G4 583 aaKnown RBP13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 TRPV1Q8NER1 839 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 REPS2Q8NFH8 660 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 NEDD1Q8NHV4 660 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 RILPL2Q969X0 211 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 FAM227BQ96M60 508 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 MMP19Q99542 508 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 SLF1Q9BQI6 1058 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 INCENPQ9NQS7 918 aa13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 DDX20Q9UHI6 824 aaKnown RBP13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 ZNF214Q9UL59 606 aaPredicted RBP13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 COL11A1P12107 1806 aaPredicted RBP13.76□□□□□ -0.21
SOX2-OT-233ENST00000600778 A0A0D9SFI3 127 aa13.75□□□□□ -0.21
SOX2-OT-233ENST00000600778 IGHA2P01877 340 aa13.75□□□□□ -0.21
SOX2-OT-233ENST00000600778 SLC4A3P48751 1232 aa13.75□□□□□ -0.21
SOX2-OT-233ENST00000600778 MCMDC2Q4G0Z9 681 aa13.75□□□□□ -0.21
SOX2-OT-233ENST00000600778 CHD1LQ86WJ1 897 aa13.75□□□□□ -0.21
SOX2-OT-233ENST00000600778 PRPF38AQ8NAV1 312 aaKnown RBP13.75□□□□□ -0.21
SOX2-OT-233ENST00000600778 KIFC2Q96AC6 838 aa13.75□□□□□ -0.21
SOX2-OT-233ENST00000600778 MAML3Q96JK9 1138 aa13.75□□□□□ -0.21
SOX2-OT-233ENST00000600778 RBM27Q9P2N5 1060 aaKnown RBP13.75□□□□□ -0.21
SOX2-OT-233ENST00000600778 CTDP1Q9Y5B0 961 aaPredicted RBP13.75□□□□□ -0.21
SOX2-OT-233ENST00000600778 MYH4Q9Y623 1939 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 ZNF236Q9UL36 1845 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 PFASO15067 1338 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 TSPY2A6NKD2 308 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 MSCO60682 206 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 ZBED4O75132 1171 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 PGK2P07205 417 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 CYBAP13498 195 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 NUCB1Q02818 461 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 NMIQ13287 307 aaPredicted RBP13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 KCTD2Q14681 263 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 PRAMEF19Q5SWL8 479 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 ANO1Q5XXA6 986 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 SLFN13Q68D06 897 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 CPXCR1Q8N123 301 aa13.74□□□□□ -0.21
SOX2-OT-233ENST00000600778 GMCL1P1Q8NEA9 526 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms