RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 PRELPP51888 382 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 SF3A1Q15459 793 aaKnown RBP23.04■■□□□ 1.28
PNKP-214ENST00000600573 NBPF9Q3BBW0 867 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 USP17L2Q6R6M4 530 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 GPC2Q8N158 579 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 GREB1LQ9C091 1923 aaPredicted RBP23.04■■□□□ 1.28
PNKP-214ENST00000600573 USP17L5A8MUK1 530 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 NLRP5P59047 1200 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 ICA1Q05084 483 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 SLC39A14Q15043 492 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 ADALQ6DHV7 355 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 ANP32BQ92688 251 aaKnown RBP23.04■■□□□ 1.28
PNKP-214ENST00000600573 SYT17Q9BSW7 474 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 GINM1Q9NU53 330 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 SEC63Q9UGP8 760 aaKnown RBP23.04■■□□□ 1.28
PNKP-214ENST00000600573 CEP131Q9UPN4 1083 aa23.04■■□□□ 1.28
PNKP-214ENST00000600573 MORC2Q9Y6X9 1032 aaPredicted RBP23.04■■□□□ 1.28
PNKP-214ENST00000600573 SPTLC2O15270 562 aa23.03■■□□□ 1.28
PNKP-214ENST00000600573 PPP6R2O75170 966 aa23.03■■□□□ 1.28
PNKP-214ENST00000600573 EEF2P13639 858 aaKnown RBP23.03■■□□□ 1.28
PNKP-214ENST00000600573 ZNF543Q08ER8 600 aa23.03■■□□□ 1.28
PNKP-214ENST00000600573 LRRC47Q8N1G4 583 aaKnown RBP23.03■■□□□ 1.28
PNKP-214ENST00000600573 GMCL1P1Q8NEA9 526 aa23.03■■□□□ 1.28
PNKP-214ENST00000600573 CLSTN2Q9H4D0 955 aa23.03■■□□□ 1.28
PNKP-214ENST00000600573 BARHL2Q9NY43 387 aa23.03■■□□□ 1.28
PNKP-214ENST00000600573 DACT1Q9NYF0 836 aa23.03■■□□□ 1.28
PNKP-214ENST00000600573 PGAP2Q9UHJ9 254 aa23.03■■□□□ 1.28
PNKP-214ENST00000600573 SIPA1L1O43166 1804 aa23.02■■□□□ 1.28
PNKP-214ENST00000600573 A0A1W2PQ27 194 aa23.02■■□□□ 1.28
PNKP-214ENST00000600573 A0A1W2PQ64 194 aa23.02■■□□□ 1.28
PNKP-214ENST00000600573 A0A1W2PQD8 194 aa23.02■■□□□ 1.28
PNKP-214ENST00000600573 CYTH3O43739 400 aa23.02■■□□□ 1.28
PNKP-214ENST00000600573 ME1P48163 572 aa23.02■■□□□ 1.28
PNKP-214ENST00000600573 CCDC73Q6ZRK6 1079 aa23.02■■□□□ 1.28
PNKP-214ENST00000600573 HOOK2Q96ED9 719 aa23.02■■□□□ 1.28
PNKP-214ENST00000600573 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.02■■□□□ 1.28
PNKP-214ENST00000600573 NOL7Q9UMY1 257 aaKnown RBP23.02■■□□□ 1.28
PNKP-214ENST00000600573 BMP15O95972 392 aa23.01■■□□□ 1.27
PNKP-214ENST00000600573 GOLGA8HP0CJ92 632 aa23.01■■□□□ 1.27
PNKP-214ENST00000600573 SEPT2Q15019 361 aa23.01■■□□□ 1.27
PNKP-214ENST00000600573 MAP3K11Q16584 847 aa23.01■■□□□ 1.27
PNKP-214ENST00000600573 MTMR7Q9Y216 660 aa23.01■■□□□ 1.27
PNKP-214ENST00000600573 CLIC4Q9Y696 253 aa23.01■■□□□ 1.27
PNKP-214ENST00000600573 FAM196BA6NMK8 535 aa23■■□□□ 1.27
PNKP-214ENST00000600573 TRAPPC10P48553 1259 aa23■■□□□ 1.27
PNKP-214ENST00000600573 ATP2B2Q01814 1243 aa23■■□□□ 1.27
PNKP-214ENST00000600573 KIF4BQ2VIQ3 1234 aa23■■□□□ 1.27
PNKP-214ENST00000600573 CCAR1Q8IX12 1150 aaKnown RBP23■■□□□ 1.27
PNKP-214ENST00000600573 DAGLBQ8NCG7 672 aa23■■□□□ 1.27
PNKP-214ENST00000600573 TMEM39BQ9GZU3 492 aa23■■□□□ 1.27
PNKP-214ENST00000600573 ARHGEF10LQ9HCE6 1279 aa23■■□□□ 1.27
PNKP-214ENST00000600573 ZNF541Q9H0D2 1346 aa23■■□□□ 1.27
PNKP-214ENST00000600573 hCG_1642624A0A1W2PR95 340 aa23■■□□□ 1.27
PNKP-214ENST00000600573 GH2P01242 217 aa23■■□□□ 1.27
PNKP-214ENST00000600573 RASA3Q14644 834 aa23■■□□□ 1.27
PNKP-214ENST00000600573 GMCL1Q96IK5 515 aa23■■□□□ 1.27
PNKP-214ENST00000600573 TNMDQ9H2S6 317 aa23■■□□□ 1.27
PNKP-214ENST00000600573 PCDHA4Q9UN74 947 aa23■■□□□ 1.27
PNKP-214ENST00000600573 GNA11P29992 359 aa22.99■■□□□ 1.27
PNKP-214ENST00000600573 SLFN13Q68D06 897 aa22.99■■□□□ 1.27
PNKP-214ENST00000600573 SH2D4AQ9H788 454 aa22.99■■□□□ 1.27
PNKP-214ENST00000600573 NR1I2O75469 434 aa22.98■■□□□ 1.27
PNKP-214ENST00000600573 GDF11O95390 407 aa22.98■■□□□ 1.27
PNKP-214ENST00000600573 SIAH1Q8IUQ4 282 aa22.98■■□□□ 1.27
PNKP-214ENST00000600573 APOBEC3FQ8IUX4 373 aaKnown RBP22.98■■□□□ 1.27
PNKP-214ENST00000600573 BLIDQ8IZY5 108 aa22.98■■□□□ 1.27
PNKP-214ENST00000600573 FSIP1Q8NA03 581 aa22.98■■□□□ 1.27
PNKP-214ENST00000600573 MRPS27Q92552 414 aaKnown RBP22.98■■□□□ 1.27
PNKP-214ENST00000600573 TNFRSF25Q93038 417 aa22.98■■□□□ 1.27
PNKP-214ENST00000600573 FUCA2Q9BTY2 467 aa22.98■■□□□ 1.27
PNKP-214ENST00000600573 GPRC5DQ9NZD1 345 aa22.98■■□□□ 1.27
PNKP-214ENST00000600573 PCDHA7Q9UN72 937 aa22.98■■□□□ 1.27
PNKP-214ENST00000600573 ESYT2A0FGR8 921 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 STXBP3O00186 592 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 SLC1A4P43007 532 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 CCDC173Q0VFZ6 552 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 NR5A1Q13285 461 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 PTPAQ15257 358 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 NPY5RQ15761 445 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 SLC35G1Q2M3R5 365 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 SHISA4Q96DD7 197 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 C6orf50Q9HD87 102 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 PNMA6FA0A0J9YX94 578 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 SHTN1A0MZ66 631 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 F5H6K3 240 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 CCDC192P0DO97 292 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 CAP2P40123 477 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 FAM160A1Q05DH4 1040 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 KLRC3Q07444 240 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 CCDC96Q2M329 555 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 WWC2Q6AWC2 1192 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 PPP1R18Q6NYC8 613 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 RBM43Q6ZSC3 357 aaKnown RBP22.97■■□□□ 1.27
PNKP-214ENST00000600573 SAMD7Q7Z3H4 446 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 HEATR3Q7Z4Q2 680 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 OXER1Q8TDS5 423 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 ZMYND12Q9H0C1 365 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 HACL1Q9UJ83 578 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 PPP2R3BQ9Y5P8 575 aa22.97■■□□□ 1.27
PNKP-214ENST00000600573 FRMPD2Q68DX3 1309 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms