RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 GBF1Q92538 1859 aa21.64■■□□□ 1.05
SSBP4-207ENST00000600244 ELP1O95163 1332 aa21.63■■□□□ 1.05
SSBP4-207ENST00000600244 MROH7Q68CQ1 1323 aa21.63■■□□□ 1.05
SSBP4-207ENST00000600244 SMIM22K7EJ46 135 aa21.63■■□□□ 1.05
SSBP4-207ENST00000600244 UBTFL1P0CB47 393 aaPredicted RBP21.63■■□□□ 1.05
SSBP4-207ENST00000600244 AKR1A1P14550 325 aa21.63■■□□□ 1.05
SSBP4-207ENST00000600244 SKIV2LQ15477 1246 aaKnown RBP21.63■■□□□ 1.05
SSBP4-207ENST00000600244 KCNA10Q16322 511 aa21.63■■□□□ 1.05
SSBP4-207ENST00000600244 NCAPG2Q86XI2 1143 aa21.63■■□□□ 1.05
SSBP4-207ENST00000600244 MB21D1Q8N884 522 aa21.63■■□□□ 1.05
SSBP4-207ENST00000600244 COG5Q9UP83 839 aa21.63■■□□□ 1.05
SSBP4-207ENST00000600244 MTCH2Q9Y6C9 303 aa21.63■■□□□ 1.05
SSBP4-207ENST00000600244 ZNFX1Q9P2E3 1918 aaKnown RBP21.63■■□□□ 1.05
SSBP4-207ENST00000600244 FCER1AP12319 257 aa21.62■■□□□ 1.05
SSBP4-207ENST00000600244 GUCY1A2P33402 732 aa21.62■■□□□ 1.05
SSBP4-207ENST00000600244 ABCB5Q2M3G0 1257 aa21.62■■□□□ 1.05
SSBP4-207ENST00000600244 NEUROD6Q96NK8 337 aa21.62■■□□□ 1.05
SSBP4-207ENST00000600244 A0A0G2JMZ2 1700 aa21.62■■□□□ 1.05
SSBP4-207ENST00000600244 SYNRGQ9UMZ2 1314 aa21.61■■□□□ 1.05
SSBP4-207ENST00000600244 TRANK1O15050 2925 aa21.61■■□□□ 1.05
SSBP4-207ENST00000600244 FGBP02675 491 aa21.61■■□□□ 1.05
SSBP4-207ENST00000600244 CERKLQ49MI3 558 aaPredicted RBP21.61■■□□□ 1.05
SSBP4-207ENST00000600244 PPP1R12CQ9BZL4 782 aa21.61■■□□□ 1.05
SSBP4-207ENST00000600244 EHD4Q9H223 541 aa21.61■■□□□ 1.05
SSBP4-207ENST00000600244 MTIF3Q9H2K0 278 aaKnown RBP21.61■■□□□ 1.05
SSBP4-207ENST00000600244 DIS3Q9Y2L1 958 aaKnown RBP21.61■■□□□ 1.05
SSBP4-207ENST00000600244 DSG3P32926 999 aa21.6■■□□□ 1.05
SSBP4-207ENST00000600244 RABGGTBP53611 331 aa21.6■■□□□ 1.05
SSBP4-207ENST00000600244 ZNF792Q3KQV3 632 aa21.6■■□□□ 1.05
SSBP4-207ENST00000600244 PPP2R2DQ66LE6 453 aa21.6■■□□□ 1.05
SSBP4-207ENST00000600244 FAM126BQ8IXS8 530 aa21.6■■□□□ 1.05
SSBP4-207ENST00000600244 CD320Q9NPF0 282 aa21.6■■□□□ 1.05
SSBP4-207ENST00000600244 SERPINB13Q9UIV8 391 aa21.6■■□□□ 1.05
SSBP4-207ENST00000600244 LRRC37A2A6NM11 1700 aa21.6■■□□□ 1.05
SSBP4-207ENST00000600244 A0A1W2PRG0 241 aa21.59■■□□□ 1.05
SSBP4-207ENST00000600244 MYOGP15173 224 aa21.59■■□□□ 1.05
SSBP4-207ENST00000600244 CYP2C18P33260 490 aa21.59■■□□□ 1.05
SSBP4-207ENST00000600244 PLS1Q14651 629 aa21.59■■□□□ 1.05
SSBP4-207ENST00000600244 GLT1D1Q96MS3 346 aa21.59■■□□□ 1.05
SSBP4-207ENST00000600244 CABP5Q9NP86 173 aa21.59■■□□□ 1.05
SSBP4-207ENST00000600244 PCDHA11Q9Y5I1 949 aa21.59■■□□□ 1.05
SSBP4-207ENST00000600244 MYADML2A6NDP7 307 aa21.58■■□□□ 1.05
SSBP4-207ENST00000600244 PRR33A8MZF0 331 aa21.58■■□□□ 1.05
SSBP4-207ENST00000600244 ARVCFO00192 962 aa21.58■■□□□ 1.05
SSBP4-207ENST00000600244 RFXAPO00287 272 aa21.58■■□□□ 1.05
SSBP4-207ENST00000600244 PGK2P07205 417 aa21.58■■□□□ 1.05
SSBP4-207ENST00000600244 CST5P28325 142 aaPredicted RBP21.58■■□□□ 1.05
SSBP4-207ENST00000600244 GORABQ5T7V8 394 aa21.58■■□□□ 1.05
SSBP4-207ENST00000600244 SSH1Q8WYL5 1049 aa21.58■■□□□ 1.05
SSBP4-207ENST00000600244 CDCA7LQ96GN5 454 aa21.58■■□□□ 1.05
SSBP4-207ENST00000600244 TANGO6Q9C0B7 1094 aa21.58■■□□□ 1.05
SSBP4-207ENST00000600244 APBB1O00213 710 aa21.57■■□□□ 1.04
SSBP4-207ENST00000600244 CD4P01730 458 aa21.57■■□□□ 1.04
SSBP4-207ENST00000600244 UQCRFS1P1P0C7P4 283 aa21.57■■□□□ 1.04
SSBP4-207ENST00000600244 SHMT1P34896 483 aa21.57■■□□□ 1.04
SSBP4-207ENST00000600244 DYNLL1P63167 89 aaKnown RBP21.57■■□□□ 1.04
SSBP4-207ENST00000600244 IRX5P78411 483 aaPredicted RBP21.57■■□□□ 1.04
SSBP4-207ENST00000600244 SEPT2Q15019 361 aa21.57■■□□□ 1.04
SSBP4-207ENST00000600244 KIAA1755Q5JYT7 1200 aa21.57■■□□□ 1.04
SSBP4-207ENST00000600244 OTOP2Q7RTS6 562 aa21.57■■□□□ 1.04
SSBP4-207ENST00000600244 FAM9BQ8IZU0 186 aa21.57■■□□□ 1.04
SSBP4-207ENST00000600244 ATG4CQ96DT6 458 aa21.57■■□□□ 1.04
SSBP4-207ENST00000600244 MMP19Q99542 508 aa21.57■■□□□ 1.04
SSBP4-207ENST00000600244 SLC25A27O95847 323 aa21.56■■□□□ 1.04
SSBP4-207ENST00000600244 HLA-CQ95604 372 aa21.56■■□□□ 1.04
SSBP4-207ENST00000600244 FAM184BQ9ULE4 1060 aa21.56■■□□□ 1.04
SSBP4-207ENST00000600244 A0A0U1RQG5 324 aaPredicted RBP21.55■■□□□ 1.04
SSBP4-207ENST00000600244 GTPBP6O43824 516 aaPredicted RBP21.55■■□□□ 1.04
SSBP4-207ENST00000600244 DUSP11O75319 330 aaKnown RBP21.55■■□□□ 1.04
SSBP4-207ENST00000600244 ASGR1P07306 291 aa21.55■■□□□ 1.04
SSBP4-207ENST00000600244 NHLH1Q02575 133 aa21.55■■□□□ 1.04
SSBP4-207ENST00000600244 TMEM132BQ14DG7 1078 aa21.55■■□□□ 1.04
SSBP4-207ENST00000600244 SNRKQ9NRH2 765 aa21.55■■□□□ 1.04
SSBP4-207ENST00000600244 CNPY2Q9Y2B0 182 aa21.55■■□□□ 1.04
SSBP4-207ENST00000600244 MYH1P12882 1939 aa21.55■■□□□ 1.04
SSBP4-207ENST00000600244 TLR3O15455 904 aaKnown RBP21.54■■□□□ 1.04
SSBP4-207ENST00000600244 IGSF3O75054 1194 aa21.54■■□□□ 1.04
SSBP4-207ENST00000600244 KRT40Q6A162 431 aa21.54■■□□□ 1.04
SSBP4-207ENST00000600244 PCSK9Q8NBP7 692 aaKnown RBP21.54■■□□□ 1.04
SSBP4-207ENST00000600244 HDAC5Q9UQL6 1122 aa21.54■■□□□ 1.04
SSBP4-207ENST00000600244 SLC4A7Q9Y6M7 1214 aa21.54■■□□□ 1.04
SSBP4-207ENST00000600244 SNAI1O95863 264 aaPredicted RBP21.53■■□□□ 1.04
SSBP4-207ENST00000600244 CYP2E1P05181 493 aaPredicted RBP21.53■■□□□ 1.04
SSBP4-207ENST00000600244 TTC6Q86TZ1 520 aa21.53■■□□□ 1.04
SSBP4-207ENST00000600244 VWCEQ96DN2 955 aa21.53■■□□□ 1.04
SSBP4-207ENST00000600244 ADAMTS5Q9UNA0 930 aa21.53■■□□□ 1.04
SSBP4-207ENST00000600244 UMODL1Q5DID0 1318 aa21.53■■□□□ 1.04
SSBP4-207ENST00000600244 EPOPA6NHQ4 379 aa21.52■■□□□ 1.04
SSBP4-207ENST00000600244 FLOT1O75955 427 aa21.52■■□□□ 1.04
SSBP4-207ENST00000600244 KCTD2Q14681 263 aa21.52■■□□□ 1.04
SSBP4-207ENST00000600244 RIOX2Q8IUF8 465 aa21.52■■□□□ 1.04
SSBP4-207ENST00000600244 MSL3Q8N5Y2 521 aaKnown RBP21.52■■□□□ 1.04
SSBP4-207ENST00000600244 VTI1AQ96AJ9 217 aa21.52■■□□□ 1.04
SSBP4-207ENST00000600244 UPF3AQ9H1J1 476 aaKnown RBP21.52■■□□□ 1.04
SSBP4-207ENST00000600244 PLCD1P51178 756 aa21.51■■□□□ 1.03
SSBP4-207ENST00000600244 SLC43A3Q8NBI5 491 aa21.51■■□□□ 1.03
SSBP4-207ENST00000600244 HIPK3Q9H422 1215 aa21.51■■□□□ 1.03
SSBP4-207ENST00000600244 ADCY6O43306 1168 aa21.5■■□□□ 1.03
SSBP4-207ENST00000600244 C6orf222P0C671 652 aaPredicted RBP21.5■■□□□ 1.03
SSBP4-207ENST00000600244 USP5P45974 858 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms