RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 CDK8P49336 464 aa16.47■□□□□ 0.23
IRF3-225ENST00000600022 HSP90AB4PQ58FF6 505 aa16.47■□□□□ 0.23
IRF3-225ENST00000600022 C9orf50Q5SZB4 431 aa16.47■□□□□ 0.23
IRF3-225ENST00000600022 C12orf60Q5U649 245 aa16.47■□□□□ 0.23
IRF3-225ENST00000600022 OLFML2BQ68BL8 750 aa16.47■□□□□ 0.23
IRF3-225ENST00000600022 TMED8Q6PL24 325 aaPredicted RBP16.47■□□□□ 0.23
IRF3-225ENST00000600022 SLC39A5Q6ZMH5 540 aa16.47■□□□□ 0.23
IRF3-225ENST00000600022 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
IRF3-225ENST00000600022 CDH23Q9H251 3354 aa16.47■□□□□ 0.23
IRF3-225ENST00000600022 PGK2P07205 417 aa16.46■□□□□ 0.23
IRF3-225ENST00000600022 EEF2P13639 858 aaKnown RBP16.46■□□□□ 0.23
IRF3-225ENST00000600022 ICA1Q05084 483 aa16.46■□□□□ 0.23
IRF3-225ENST00000600022 SHHQ15465 462 aa16.46■□□□□ 0.23
IRF3-225ENST00000600022 SHCBP1Q8NEM2 672 aa16.46■□□□□ 0.23
IRF3-225ENST00000600022 MAML3Q96JK9 1138 aa16.46■□□□□ 0.23
IRF3-225ENST00000600022 LBHD1Q9BQE6 289 aaPredicted RBP16.46■□□□□ 0.23
IRF3-225ENST00000600022 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.46■□□□□ 0.23
IRF3-225ENST00000600022 VCPKMTQ9H867 229 aa16.46■□□□□ 0.23
IRF3-225ENST00000600022 TRIM43BA6NCK2 446 aa16.45■□□□□ 0.22
IRF3-225ENST00000600022 SEPT4O43236 478 aa16.45■□□□□ 0.22
IRF3-225ENST00000600022 SMARCA5O60264 1052 aaPredicted RBP16.45■□□□□ 0.22
IRF3-225ENST00000600022 MSCO60682 206 aa16.45■□□□□ 0.22
IRF3-225ENST00000600022 ATP5JP18859 108 aa16.45■□□□□ 0.22
IRF3-225ENST00000600022 ITGB8P26012 769 aa16.45■□□□□ 0.22
IRF3-225ENST00000600022 LRRC41Q15345 812 aa16.45■□□□□ 0.22
IRF3-225ENST00000600022 TRIM60Q495X7 471 aa16.45■□□□□ 0.22
IRF3-225ENST00000600022 FAM47AQ5JRC9 791 aa16.45■□□□□ 0.22
IRF3-225ENST00000600022 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
IRF3-225ENST00000600022 TRIM43Q96BQ3 446 aaPredicted RBP16.45■□□□□ 0.22
IRF3-225ENST00000600022 PUS7LQ9H0K6 701 aaKnown RBP16.45■□□□□ 0.22
IRF3-225ENST00000600022 SWAP70Q9UH65 585 aa16.45■□□□□ 0.22
IRF3-225ENST00000600022 BAZ2AQ9UIF9 1905 aaKnown RBP16.45■□□□□ 0.22
IRF3-225ENST00000600022 CTR9Q6PD62 1173 aa16.44■□□□□ 0.22
IRF3-225ENST00000600022 ARRDC4Q8NCT1 418 aa16.44■□□□□ 0.22
IRF3-225ENST00000600022 BADQ92934 168 aa16.44■□□□□ 0.22
IRF3-225ENST00000600022 LENG1Q96BZ8 264 aaPredicted RBP16.44■□□□□ 0.22
IRF3-225ENST00000600022 HAUS7Q99871 368 aa16.44■□□□□ 0.22
IRF3-225ENST00000600022 MROH8Q9H579 483 aa16.44■□□□□ 0.22
IRF3-225ENST00000600022 DCTPP1Q9H773 170 aa16.44■□□□□ 0.22
IRF3-225ENST00000600022 PRDM5Q9NQX1 630 aaPredicted RBP16.44■□□□□ 0.22
IRF3-225ENST00000600022 ATP8A2Q9NTI2 1148 aa16.44■□□□□ 0.22
IRF3-225ENST00000600022 ADAMTS5Q9UNA0 930 aa16.44■□□□□ 0.22
IRF3-225ENST00000600022 A0A0G2JMZ2 1700 aa16.44■□□□□ 0.22
IRF3-225ENST00000600022 SMCHD1A6NHR9 2005 aa16.43■□□□□ 0.22
IRF3-225ENST00000600022 C16orf86Q6ZW13 317 aa16.43■□□□□ 0.22
IRF3-225ENST00000600022 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
IRF3-225ENST00000600022 ARHGEF10LQ9HCE6 1279 aa16.43■□□□□ 0.22
IRF3-225ENST00000600022 SLC4A4Q9Y6R1 1079 aa16.43■□□□□ 0.22
IRF3-225ENST00000600022 WDR46O15213 610 aaKnown RBP16.42■□□□□ 0.22
IRF3-225ENST00000600022 RAD21O60216 631 aa16.42■□□□□ 0.22
IRF3-225ENST00000600022 RAB11FIP3O75154 756 aa16.42■□□□□ 0.22
IRF3-225ENST00000600022 PGK1P00558 417 aa16.42■□□□□ 0.22
IRF3-225ENST00000600022 FCER1AP12319 257 aa16.42■□□□□ 0.22
IRF3-225ENST00000600022 EPHB4P54760 987 aa16.42■□□□□ 0.22
IRF3-225ENST00000600022 FAM83BQ5T0W9 1011 aa16.42■□□□□ 0.22
IRF3-225ENST00000600022 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
IRF3-225ENST00000600022 REPS2Q8NFH8 660 aa16.42■□□□□ 0.22
IRF3-225ENST00000600022 PDLIM7Q9NR12 457 aa16.42■□□□□ 0.22
IRF3-225ENST00000600022 ZBTB47Q9UFB7 747 aaPredicted RBP16.42■□□□□ 0.22
IRF3-225ENST00000600022 ZNF236Q9UL36 1845 aa16.41■□□□□ 0.22
IRF3-225ENST00000600022 KBTBD13C9JR72 458 aa16.41■□□□□ 0.22
IRF3-225ENST00000600022 VWA5AO00534 786 aa16.41■□□□□ 0.22
IRF3-225ENST00000600022 IRX5P78411 483 aaPredicted RBP16.41■□□□□ 0.22
IRF3-225ENST00000600022 TLE2Q04725 743 aa16.41■□□□□ 0.22
IRF3-225ENST00000600022 SNX17Q15036 470 aa16.41■□□□□ 0.22
IRF3-225ENST00000600022 ZNF792Q3KQV3 632 aa16.41■□□□□ 0.22
IRF3-225ENST00000600022 FAM109BQ6ICB4 259 aaPredicted RBP16.41■□□□□ 0.22
IRF3-225ENST00000600022 ABRAQ8N0Z2 381 aa16.41■□□□□ 0.22
IRF3-225ENST00000600022 CCDC17Q96LX7 622 aa16.41■□□□□ 0.22
IRF3-225ENST00000600022 MMP19Q99542 508 aa16.41■□□□□ 0.22
IRF3-225ENST00000600022 PRKAG2Q9UGJ0 569 aa16.41■□□□□ 0.22
IRF3-225ENST00000600022 ZNF214Q9UL59 606 aaPredicted RBP16.41■□□□□ 0.22
IRF3-225ENST00000600022 RIPK3Q9Y572 518 aa16.41■□□□□ 0.22
IRF3-225ENST00000600022 ZNFX1Q9P2E3 1918 aaKnown RBP16.41■□□□□ 0.22
IRF3-225ENST00000600022 LTBP2Q14767 1821 aa16.4■□□□□ 0.22
IRF3-225ENST00000600022 ZNF865P0CJ78 1059 aaPredicted RBP16.4■□□□□ 0.22
IRF3-225ENST00000600022 STAT3P40763 770 aa16.4■□□□□ 0.22
IRF3-225ENST00000600022 UBE3CQ15386 1083 aa16.4■□□□□ 0.22
IRF3-225ENST00000600022 TSHZ3Q63HK5 1081 aa16.4■□□□□ 0.22
IRF3-225ENST00000600022 RIOX2Q8IUF8 465 aa16.4■□□□□ 0.22
IRF3-225ENST00000600022 TINF2Q9BSI4 451 aa16.4■□□□□ 0.22
IRF3-225ENST00000600022 COL25A1Q9BXS0 654 aaPredicted RBP16.4■□□□□ 0.22
IRF3-225ENST00000600022 KANSL2Q9H9L4 492 aa16.4■□□□□ 0.22
IRF3-225ENST00000600022 COL11A1P12107 1806 aaPredicted RBP16.4■□□□□ 0.22
IRF3-225ENST00000600022 PARP14Q460N5 1801 aa16.4■□□□□ 0.22
IRF3-225ENST00000600022 SPTBN5Q9NRC6 3674 aaKnown RBP16.4■□□□□ 0.22
IRF3-225ENST00000600022 NUCB1Q02818 461 aa16.39■□□□□ 0.21
IRF3-225ENST00000600022 STRBPQ96SI9 672 aaKnown RBP16.39■□□□□ 0.21
IRF3-225ENST00000600022 CDX2Q99626 313 aaPredicted RBP16.39■□□□□ 0.21
IRF3-225ENST00000600022 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.39■□□□□ 0.212e-6■■■■□ 21.1
IRF3-225ENST00000600022 SEMA6BQ9H3T3 888 aa16.39■□□□□ 0.21
IRF3-225ENST00000600022 XPNPEP3Q9NQH7 507 aa16.39■□□□□ 0.21
IRF3-225ENST00000600022 PPP1R9AQ9ULJ8 1098 aa16.39■□□□□ 0.21
IRF3-225ENST00000600022 GSG1L2A8MUP6 293 aa16.38■□□□□ 0.21
IRF3-225ENST00000600022 SLC25A27O95847 323 aa16.38■□□□□ 0.21
IRF3-225ENST00000600022 RASA1P20936 1047 aa16.38■□□□□ 0.21
IRF3-225ENST00000600022 SLC4A3P48751 1232 aa16.38■□□□□ 0.21
IRF3-225ENST00000600022 TTYH1Q9H313 450 aaPredicted RBP16.38■□□□□ 0.21
IRF3-225ENST00000600022 SH2D4AQ9H788 454 aa16.38■□□□□ 0.21
IRF3-225ENST00000600022 SLC5A4Q9NY91 659 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms