RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 SYNPO2Q9UMS6 1093 aa33.37■■■□□ 2.93
ZNF558-206ENST00000599938 TACC3Q9Y6A5 838 aa33.37■■■□□ 2.93
ZNF558-206ENST00000599938 CCL5P13501 91 aa33.36■■■□□ 2.93
ZNF558-206ENST00000599938 EN2P19622 333 aaPredicted RBP33.36■■■□□ 2.93
ZNF558-206ENST00000599938 CYP2B6P20813 491 aa33.36■■■□□ 2.93
ZNF558-206ENST00000599938 MKL1Q969V6 931 aa33.36■■■□□ 2.93
ZNF558-206ENST00000599938 SPATC1LQ9H0A9 340 aa33.36■■■□□ 2.93
ZNF558-206ENST00000599938 RRP12Q5JTH9 1297 aaKnown RBP33.35■■■□□ 2.93
ZNF558-206ENST00000599938 PPP4R3BQ5MIZ7 849 aa33.35■■■□□ 2.93
ZNF558-206ENST00000599938 PDE4DIPQ5VU43 2346 aa33.35■■■□□ 2.93
ZNF558-206ENST00000599938 HMGCRP04035 888 aa33.34■■■□□ 2.93
ZNF558-206ENST00000599938 FGRP09769 529 aa33.34■■■□□ 2.93
ZNF558-206ENST00000599938 PLS1Q14651 629 aa33.34■■■□□ 2.93
ZNF558-206ENST00000599938 MOV10L1Q9BXT6 1211 aaKnown RBP33.34■■■□□ 2.93
ZNF558-206ENST00000599938 RNF208Q9H0X6 261 aa33.34■■■□□ 2.93
ZNF558-206ENST00000599938 PPP1R9AQ9ULJ8 1098 aa33.34■■■□□ 2.93
ZNF558-206ENST00000599938 IVNS1ABPQ9Y6Y0 642 aa33.34■■■□□ 2.93
ZNF558-206ENST00000599938 COL11A1P12107 1806 aaPredicted RBP33.34■■■□□ 2.93
ZNF558-206ENST00000599938 MORN1Q5T089 497 aa33.33■■■□□ 2.93
ZNF558-206ENST00000599938 GMCL1P1Q8NEA9 526 aa33.33■■■□□ 2.93
ZNF558-206ENST00000599938 STX8Q9UNK0 236 aa33.33■■■□□ 2.93
ZNF558-206ENST00000599938 RGS2P41220 211 aa33.32■■■□□ 2.92
ZNF558-206ENST00000599938 CENPQQ7L2Z9 268 aaPredicted RBP33.32■■■□□ 2.92
ZNF558-206ENST00000599938 TBC1D10CQ8IV04 446 aa33.32■■■□□ 2.92
ZNF558-206ENST00000599938 SLF1Q9BQI6 1058 aa33.32■■■□□ 2.92
ZNF558-206ENST00000599938 UNC93B1Q9H1C4 597 aa33.32■■■□□ 2.92
ZNF558-206ENST00000599938 NMT2O60551 498 aa33.31■■■□□ 2.92
ZNF558-206ENST00000599938 XRCC5P13010 732 aaKnown RBP33.31■■■□□ 2.92
ZNF558-206ENST00000599938 TRIB2Q92519 343 aa33.31■■■□□ 2.92
ZNF558-206ENST00000599938 USP6NLQ92738 828 aa33.31■■■□□ 2.92
ZNF558-206ENST00000599938 APBA2Q99767 749 aa33.31■■■□□ 2.92
ZNF558-206ENST00000599938 DSCC1Q9BVC3 393 aa33.31■■■□□ 2.92
ZNF558-206ENST00000599938 NBPF3Q9H094 633 aa33.31■■■□□ 2.92
ZNF558-206ENST00000599938 IL17RBQ9NRM6 502 aa33.31■■■□□ 2.92
ZNF558-206ENST00000599938 RAD50Q92878 1312 aa33.3■■■□□ 2.92
ZNF558-206ENST00000599938 PCP11498 1178 aaKnown RBP33.3■■■□□ 2.92
ZNF558-206ENST00000599938 PTPREP23469 700 aa33.3■■■□□ 2.92
ZNF558-206ENST00000599938 AKNAD1Q5T1N1 836 aa33.3■■■□□ 2.92
ZNF558-206ENST00000599938 MFSD6Q6ZSS7 791 aa33.3■■■□□ 2.92
ZNF558-206ENST00000599938 SHCBP1Q8NEM2 672 aa33.3■■■□□ 2.92
ZNF558-206ENST00000599938 STAG1Q8WVM7 1258 aa33.3■■■□□ 2.92
ZNF558-206ENST00000599938 IL25Q9H293 177 aa33.3■■■□□ 2.92
ZNF558-206ENST00000599938 RNF41Q9H4P4 317 aaPredicted RBP33.3■■■□□ 2.92
ZNF558-206ENST00000599938 ADAMTS5Q9UNA0 930 aa33.3■■■□□ 2.92
ZNF558-206ENST00000599938 SLC15A5A6NIM6 579 aa33.29■■■□□ 2.92
ZNF558-206ENST00000599938 ZNF213O14771 459 aa33.29■■■□□ 2.92
ZNF558-206ENST00000599938 ZKSCAN1P17029 563 aaPredicted RBP33.29■■■□□ 2.92
ZNF558-206ENST00000599938 ERCC3P19447 782 aa33.29■■■□□ 2.92
ZNF558-206ENST00000599938 MAP2K5Q13163 448 aa33.29■■■□□ 2.92
ZNF558-206ENST00000599938 TMEM132BQ14DG7 1078 aa33.29■■■□□ 2.92
ZNF558-206ENST00000599938 SLFN13Q68D06 897 aa33.29■■■□□ 2.92
ZNF558-206ENST00000599938 ISY1Q9ULR0 285 aaKnown RBP33.29■■■□□ 2.92
ZNF558-206ENST00000599938 ZNF236Q9UL36 1845 aa33.28■■■□□ 2.92
ZNF558-206ENST00000599938 VWA5AO00534 786 aa33.28■■■□□ 2.92
ZNF558-206ENST00000599938 GJB1P08034 283 aa33.28■■■□□ 2.92
ZNF558-206ENST00000599938 GRB14Q14449 540 aa33.28■■■□□ 2.92
ZNF558-206ENST00000599938 RUFY2Q8WXA3 655 aa33.28■■■□□ 2.92
ZNF558-206ENST00000599938 NCAPG2Q86XI2 1143 aa33.27■■■□□ 2.92
ZNF558-206ENST00000599938 TRMT44Q8IYL2 757 aaKnown RBP33.27■■■□□ 2.92
ZNF558-206ENST00000599938 NKX2-3Q8TAU0 364 aa33.27■■■□□ 2.92
ZNF558-206ENST00000599938 CHMLP26374 656 aa33.26■■■□□ 2.91
ZNF558-206ENST00000599938 TRIM32Q13049 653 aa33.26■■■□□ 2.91
ZNF558-206ENST00000599938 SHISA4Q96DD7 197 aa33.26■■■□□ 2.91
ZNF558-206ENST00000599938 MROH8Q9H579 483 aa33.26■■■□□ 2.91
ZNF558-206ENST00000599938 NEDD4P46934 1319 aa33.26■■■□□ 2.91
ZNF558-206ENST00000599938 BMP3P12645 472 aa33.25■■■□□ 2.91
ZNF558-206ENST00000599938 GJA8P48165 433 aa33.25■■■□□ 2.91
ZNF558-206ENST00000599938 IMMTQ16891 758 aaKnown RBP33.25■■■□□ 2.91
ZNF558-206ENST00000599938 PRPF38AQ8NAV1 312 aaKnown RBP33.25■■■□□ 2.91
ZNF558-206ENST00000599938 CTNNA3Q9UI47 895 aa33.25■■■□□ 2.91
ZNF558-206ENST00000599938 FEM1BQ9UK73 627 aa33.25■■■□□ 2.91
ZNF558-206ENST00000599938 SLC25A27O95847 323 aa33.24■■■□□ 2.91
ZNF558-206ENST00000599938 CCL14Q16627 93 aa33.24■■■□□ 2.91
ZNF558-206ENST00000599938 REPS2Q8NFH8 660 aa33.24■■■□□ 2.91
ZNF558-206ENST00000599938 KIFC2Q96AC6 838 aa33.24■■■□□ 2.91
ZNF558-206ENST00000599938 GMCL1Q96IK5 515 aa33.24■■■□□ 2.91
ZNF558-206ENST00000599938 PAK6Q9NQU5 681 aaPredicted RBP33.24■■■□□ 2.91
ZNF558-206ENST00000599938 ZNF214Q9UL59 606 aaPredicted RBP33.24■■■□□ 2.91
ZNF558-206ENST00000599938 PRKAR2AP13861 404 aaKnown RBP33.23■■■□□ 2.91
ZNF558-206ENST00000599938 SLC1A4P43007 532 aa33.23■■■□□ 2.91
ZNF558-206ENST00000599938 NOVP48745 357 aa33.23■■■□□ 2.91
ZNF558-206ENST00000599938 RIOX2Q8IUF8 465 aa33.23■■■□□ 2.91
ZNF558-206ENST00000599938 U2AF1L4Q8WU68 220 aaKnown RBP33.23■■■□□ 2.91
ZNF558-206ENST00000599938 ESR2Q92731 530 aa33.23■■■□□ 2.91
ZNF558-206ENST00000599938 CHMP4CQ96CF2 233 aa33.23■■■□□ 2.91
ZNF558-206ENST00000599938 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.23■■■□□ 2.91
ZNF558-206ENST00000599938 STRNO43815 780 aa33.22■■■□□ 2.91
ZNF558-206ENST00000599938 ADORA2AP29274 412 aa33.22■■■□□ 2.91
ZNF558-206ENST00000599938 STAT3P40763 770 aa33.22■■■□□ 2.91
ZNF558-206ENST00000599938 DEFB118Q96PH6 123 aa33.22■■■□□ 2.91
ZNF558-206ENST00000599938 TCP11L1Q9NUJ3 509 aa33.22■■■□□ 2.91
ZNF558-206ENST00000599938 MTMR7Q9Y216 660 aa33.22■■■□□ 2.91
ZNF558-206ENST00000599938 CTDP1Q9Y5B0 961 aaPredicted RBP33.22■■■□□ 2.91
ZNF558-206ENST00000599938 HOXC6P09630 235 aa33.21■■■□□ 2.91
ZNF558-206ENST00000599938 MCCP23508 829 aa33.21■■■□□ 2.91
ZNF558-206ENST00000599938 HMX1Q9NP08 348 aaPredicted RBP33.21■■■□□ 2.91
ZNF558-206ENST00000599938 RPTORQ8N122 1335 aa33.21■■■□□ 2.91
ZNF558-206ENST00000599938 TMEM232C9JQI7 657 aa33.2■■■□□ 2.91
ZNF558-206ENST00000599938 COPB2P35606 906 aa33.2■■■□□ 2.91
ZNF558-206ENST00000599938 STAT2P52630 851 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms