RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 TRIM32Q13049 653 aa12.99□□□□□ -0.33
SIN3B-210ENST00000599880 PPP4R3BQ5MIZ7 849 aa12.99□□□□□ -0.33
SIN3B-210ENST00000599880 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
SIN3B-210ENST00000599880 NEDD1Q8NHV4 660 aa12.99□□□□□ -0.33
SIN3B-210ENST00000599880 MKL1Q969V6 931 aa12.99□□□□□ -0.33
SIN3B-210ENST00000599880 ATG4CQ96DT6 458 aa12.99□□□□□ -0.33
SIN3B-210ENST00000599880 MROH8Q9H579 483 aa12.99□□□□□ -0.33
SIN3B-210ENST00000599880 PPP1R9AQ9ULJ8 1098 aa12.99□□□□□ -0.33
SIN3B-210ENST00000599880 SUPT16HQ9Y5B9 1047 aaKnown RBP12.99□□□□□ -0.33
SIN3B-210ENST00000599880 PRDM1O75626 825 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 SLC25A27O95847 323 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 TTLL1O95922 423 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 TFRCP02786 760 aaKnown RBP12.98□□□□□ -0.33
SIN3B-210ENST00000599880 TSPY3P0CV98 308 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 TSPY8P0CW00 308 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 ERCC3P19447 782 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 COPB2P35606 906 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 CACNB2Q08289 660 aaPredicted RBP12.98□□□□□ -0.33
SIN3B-210ENST00000599880 ALX1Q15699 326 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 CCL14Q16627 93 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 MCMDC2Q4G0Z9 681 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 FAM83BQ5T0W9 1011 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 B4GALNT3Q6L9W6 998 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 CCDC129Q6ZRS4 1044 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 PLEKHM2Q8IWE5 1019 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 ABRAQ8N0Z2 381 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 STK11IPQ8N1F8 1099 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 GMCL1P1Q8NEA9 526 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 CEP95Q96GE4 821 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 MTMR4Q9NYA4 1195 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 ANAPC4Q9UJX5 808 aa12.98□□□□□ -0.33
SIN3B-210ENST00000599880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.98□□□□□ -0.33
SIN3B-210ENST00000599880 A0A0D9SFI3 127 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 TRIM6-TRIM34B2RNG4 842 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 F5H6K3 240 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 VWA5AO00534 786 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 NDUFB10O96000 172 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 IGHA2P01877 340 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 KLRC3Q07444 240 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 TMEM132BQ14DG7 1078 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 VPS53Q5VIR6 699 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 RIOX2Q8IUF8 465 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 CLIP2Q9UDT6 1046 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 ZNF214Q9UL59 606 aaPredicted RBP12.97□□□□□ -0.33
SIN3B-210ENST00000599880 OGDHLQ9ULD0 1010 aa12.97□□□□□ -0.33
SIN3B-210ENST00000599880 CCDC171Q6TFL3 1326 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 RAD21O60216 631 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 FGRP09769 529 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 ADORA2AP29274 412 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 MFAP1P55081 439 aaKnown RBP12.96□□□□□ -0.33
SIN3B-210ENST00000599880 PLS1Q14651 629 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 MFSD14CQ5VZR4 134 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 OLFML2BQ68BL8 750 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 DPP9Q86TI2 863 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 NCAPG2Q86XI2 1143 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 PRPF38AQ8NAV1 312 aaKnown RBP12.96□□□□□ -0.33
SIN3B-210ENST00000599880 REPS2Q8NFH8 660 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 NPLOC4Q8TAT6 608 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 FAM227BQ96M60 508 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 SLF1Q9BQI6 1058 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 FBXO28Q9NVF7 368 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 SLC5A4Q9NY91 659 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 FLRT1Q9NZU1 646 aa12.96□□□□□ -0.33
SIN3B-210ENST00000599880 ATP2A1O14983 1001 aa12.95□□□□□ -0.34
SIN3B-210ENST00000599880 ORC4O43929 436 aa12.95□□□□□ -0.34
SIN3B-210ENST00000599880 MSCO60682 206 aa12.95□□□□□ -0.34
SIN3B-210ENST00000599880 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
SIN3B-210ENST00000599880 FCER1AP12319 257 aa12.95□□□□□ -0.34
SIN3B-210ENST00000599880 STAT3P40763 770 aa12.95□□□□□ -0.34
SIN3B-210ENST00000599880 TFAP4Q01664 338 aa12.95□□□□□ -0.34
SIN3B-210ENST00000599880 NMIQ13287 307 aaPredicted RBP12.95□□□□□ -0.34
SIN3B-210ENST00000599880 NECAB2Q7Z6G3 386 aa12.95□□□□□ -0.34
SIN3B-210ENST00000599880 RILPL2Q969X0 211 aa12.95□□□□□ -0.34
SIN3B-210ENST00000599880 TSPY2A6NKD2 308 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 HIP1O00291 1037 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 FGAP02671 866 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 FDX1P10109 184 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
SIN3B-210ENST00000599880 SDSP20132 328 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 CCND3P30281 292 aaPredicted RBP12.94□□□□□ -0.34
SIN3B-210ENST00000599880 NOVP48745 357 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
SIN3B-210ENST00000599880 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 FAM47AQ5JRC9 791 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
SIN3B-210ENST00000599880 ZNF589Q86UQ0 364 aaPredicted RBP12.94□□□□□ -0.34
SIN3B-210ENST00000599880 DPF3Q92784 378 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 GMCL1Q96IK5 515 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 PAWRQ96IZ0 340 aaKnown RBP12.94□□□□□ -0.34
SIN3B-210ENST00000599880 NUP88Q99567 741 aaPredicted RBP12.94□□□□□ -0.34
SIN3B-210ENST00000599880 TEX13BQ9BXU2 312 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 FEM1BQ9UK73 627 aa12.94□□□□□ -0.34
SIN3B-210ENST00000599880 COBLO75128 1261 aa12.93□□□□□ -0.34
SIN3B-210ENST00000599880 SLC34A2O95436 690 aa12.93□□□□□ -0.34
SIN3B-210ENST00000599880 CYBAP13498 195 aa12.93□□□□□ -0.34
SIN3B-210ENST00000599880 NT5C2P49902 561 aa12.93□□□□□ -0.34
SIN3B-210ENST00000599880 OAZ1P54368 228 aa12.93□□□□□ -0.34
SIN3B-210ENST00000599880 KCTD2Q14681 263 aa12.93□□□□□ -0.34
SIN3B-210ENST00000599880 LHX8Q68G74 356 aa12.93□□□□□ -0.34
SIN3B-210ENST00000599880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms