RNA–Protein interactions for RNA: ENST00000598962.5

PLD3-219, Transcript of phospholipase D family member 3, humanhuman

TSL 4

Gene PLD3, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-219ENST00000598962 KIF1BPQ96EK5 621 aa23.57■■□□□ 1.36
PLD3-219ENST00000598962 CCDC17Q96LX7 622 aa23.57■■□□□ 1.36
PLD3-219ENST00000598962 CDX2Q99626 313 aaPredicted RBP23.57■■□□□ 1.36
PLD3-219ENST00000598962 SEMA6BQ9H3T3 888 aa23.57■■□□□ 1.36
PLD3-219ENST00000598962 ATP8A2Q9NTI2 1148 aa23.57■■□□□ 1.36
PLD3-219ENST00000598962 ADAMTS5Q9UNA0 930 aa23.57■■□□□ 1.36
PLD3-219ENST00000598962 SMAD3P84022 425 aaKnown RBP23.56■■□□□ 1.36
PLD3-219ENST00000598962 PHF24Q9UPV7 400 aa23.56■■□□□ 1.36
PLD3-219ENST00000598962 PRUNE2Q8WUY3 3088 aa23.56■■□□□ 1.36
PLD3-219ENST00000598962 PRKAB2O43741 272 aa23.55■■□□□ 1.36
PLD3-219ENST00000598962 ADD2P35612 726 aa23.55■■□□□ 1.36
PLD3-219ENST00000598962 MBD4O95243 580 aa23.54■■□□□ 1.36
PLD3-219ENST00000598962 IFIT2P09913 472 aaKnown RBP23.54■■□□□ 1.36
PLD3-219ENST00000598962 CDK8P49336 464 aa23.54■■□□□ 1.36
PLD3-219ENST00000598962 TLE2Q04725 743 aa23.54■■□□□ 1.36
PLD3-219ENST00000598962 C12orf60Q5U649 245 aa23.54■■□□□ 1.36
PLD3-219ENST00000598962 SAMD1Q6SPF0 538 aaPredicted RBP23.54■■□□□ 1.36
PLD3-219ENST00000598962 RIOX2Q8IUF8 465 aa23.54■■□□□ 1.36
PLD3-219ENST00000598962 PANK1Q8TE04 598 aa23.54■■□□□ 1.36
PLD3-219ENST00000598962 MMP19Q99542 508 aa23.54■■□□□ 1.36
PLD3-219ENST00000598962 XPNPEP3Q9NQH7 507 aa23.54■■□□□ 1.36
PLD3-219ENST00000598962 DIS3Q9Y2L1 958 aaKnown RBP23.54■■□□□ 1.36
PLD3-219ENST00000598962 GREB1LQ9C091 1923 aaPredicted RBP23.54■■□□□ 1.36
PLD3-219ENST00000598962 ROBO3Q96MS0 1386 aa23.53■■□□□ 1.36
PLD3-219ENST00000598962 SMIM22K7EJ46 135 aa23.53■■□□□ 1.36
PLD3-219ENST00000598962 RARBP10826 455 aa23.53■■□□□ 1.36
PLD3-219ENST00000598962 ZNF792Q3KQV3 632 aa23.53■■□□□ 1.36
PLD3-219ENST00000598962 SLFNL1Q499Z3 407 aa23.53■■□□□ 1.36
PLD3-219ENST00000598962 C16orf86Q6ZW13 317 aa23.53■■□□□ 1.36
PLD3-219ENST00000598962 TINF2Q9BSI4 451 aa23.53■■□□□ 1.36
PLD3-219ENST00000598962 TTYH1Q9H313 450 aaPredicted RBP23.53■■□□□ 1.36
PLD3-219ENST00000598962 PAG1Q9NWQ8 432 aa23.53■■□□□ 1.36
PLD3-219ENST00000598962 TACC3Q9Y6A5 838 aa23.53■■□□□ 1.36
PLD3-219ENST00000598962 APBB1O00213 710 aa23.52■■□□□ 1.36
PLD3-219ENST00000598962 EEF2P13639 858 aaKnown RBP23.52■■□□□ 1.36
PLD3-219ENST00000598962 RNF180Q86T96 592 aa23.52■■□□□ 1.36
PLD3-219ENST00000598962 RPAP2Q8IXW5 612 aaPredicted RBP23.52■■□□□ 1.36
PLD3-219ENST00000598962 FBXO28Q9NVF7 368 aa23.52■■□□□ 1.36
PLD3-219ENST00000598962 SPTBN5Q9NRC6 3674 aaKnown RBP23.52■■□□□ 1.36
PLD3-219ENST00000598962 CYP2D7A0A087X1C5 515 aa23.51■■□□□ 1.35
PLD3-219ENST00000598962 USP17L12C9JPN9 530 aa23.51■■□□□ 1.35
PLD3-219ENST00000598962 USP17L21D6R901 530 aa23.51■■□□□ 1.35
PLD3-219ENST00000598962 PGK2P07205 417 aa23.51■■□□□ 1.35
PLD3-219ENST00000598962 CLTBP09497 229 aa23.51■■□□□ 1.35
PLD3-219ENST00000598962 ITGB8P26012 769 aa23.51■■□□□ 1.35
PLD3-219ENST00000598962 STAT3P40763 770 aa23.51■■□□□ 1.35
PLD3-219ENST00000598962 HNRNPUQ00839 825 aaKnown RBP eCLIP23.51■■□□□ 1.35
PLD3-219ENST00000598962 KCTD2Q14681 263 aa23.51■■□□□ 1.35
PLD3-219ENST00000598962 AMOTL1Q8IY63 956 aa23.51■■□□□ 1.35
PLD3-219ENST00000598962 MAFAQ8NHW3 353 aaPredicted RBP23.51■■□□□ 1.35
PLD3-219ENST00000598962 ZNF214Q9UL59 606 aaPredicted RBP23.51■■□□□ 1.35
PLD3-219ENST00000598962 VWA5AO00534 786 aa23.5■■□□□ 1.35
PLD3-219ENST00000598962 PGK1P00558 417 aa23.5■■□□□ 1.35
PLD3-219ENST00000598962 ZNF865P0CJ78 1059 aaPredicted RBP23.5■■□□□ 1.35
PLD3-219ENST00000598962 TAL1P17542 331 aaPredicted RBP23.5■■□□□ 1.35
PLD3-219ENST00000598962 REPS2Q8NFH8 660 aa23.5■■□□□ 1.35
PLD3-219ENST00000598962 MYLIPQ8WY64 445 aa23.5■■□□□ 1.35
PLD3-219ENST00000598962 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.5■■□□□ 1.352e-7■■□□□ 12
PLD3-219ENST00000598962 BOLA2Q9H3K6 86 aa23.5■■□□□ 1.35
PLD3-219ENST00000598962 KANSL2Q9H9L4 492 aa23.5■■□□□ 1.35
PLD3-219ENST00000598962 PPP1R9AQ9ULJ8 1098 aa23.5■■□□□ 1.35
PLD3-219ENST00000598962 ZBED9Q6R2W3 1325 aa23.5■■□□□ 1.35
PLD3-219ENST00000598962 A0A1W2PQ45 241 aaPredicted RBP23.49■■□□□ 1.35
PLD3-219ENST00000598962 A0A1W2PQY0 241 aa23.49■■□□□ 1.35
PLD3-219ENST00000598962 KIAA0355O15063 1070 aa23.49■■□□□ 1.35
PLD3-219ENST00000598962 RAB11FIP3O75154 756 aa23.49■■□□□ 1.35
PLD3-219ENST00000598962 AKR1A1P14550 325 aa23.49■■□□□ 1.35
PLD3-219ENST00000598962 ATP5JP18859 108 aa23.49■■□□□ 1.35
PLD3-219ENST00000598962 COPB2P35606 906 aa23.49■■□□□ 1.35
PLD3-219ENST00000598962 SIRT2Q8IXJ6 389 aa23.49■■□□□ 1.35
PLD3-219ENST00000598962 GOPCQ9HD26 462 aa23.49■■□□□ 1.35
PLD3-219ENST00000598962 TMEM265A0A087WTH1 108 aa23.48■■□□□ 1.35
PLD3-219ENST00000598962 HMMRO75330 724 aa23.48■■□□□ 1.35
PLD3-219ENST00000598962 EPHB4P54760 987 aa23.48■■□□□ 1.35
PLD3-219ENST00000598962 UBE3CQ15386 1083 aa23.48■■□□□ 1.35
PLD3-219ENST00000598962 ADAMTS4O75173 837 aa23.47■■□□□ 1.35
PLD3-219ENST00000598962 CHGBP05060 677 aa23.47■■□□□ 1.35
PLD3-219ENST00000598962 FAM83BQ5T0W9 1011 aa23.47■■□□□ 1.35
PLD3-219ENST00000598962 CTR9Q6PD62 1173 aa23.47■■□□□ 1.35
PLD3-219ENST00000598962 DDRGK1Q96HY6 314 aa23.47■■□□□ 1.35
PLD3-219ENST00000598962 RNPC3Q96LT9 517 aaKnown RBP23.47■■□□□ 1.35
PLD3-219ENST00000598962 HAUS7Q99871 368 aa23.47■■□□□ 1.35
PLD3-219ENST00000598962 TSEN34Q9BSV6 310 aaKnown RBP23.47■■□□□ 1.35
PLD3-219ENST00000598962 MYH4Q9Y623 1939 aa23.47■■□□□ 1.35
PLD3-219ENST00000598962 PQBP1O60828 265 aaKnown RBP23.46■■□□□ 1.35
PLD3-219ENST00000598962 MS4A1P11836 297 aa23.46■■□□□ 1.35
PLD3-219ENST00000598962 RAG1P15918 1043 aa23.46■■□□□ 1.35
PLD3-219ENST00000598962 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.46■■□□□ 1.35
PLD3-219ENST00000598962 BCL11AQ9H165 835 aa23.46■■□□□ 1.35
PLD3-219ENST00000598962 SLC4A4Q9Y6R1 1079 aa23.46■■□□□ 1.35
PLD3-219ENST00000598962 MCM3APO60318 1980 aa23.45■■□□□ 1.35
PLD3-219ENST00000598962 ANKRD33Q7Z3H0 272 aa23.45■■□□□ 1.34
PLD3-219ENST00000598962 MSL3Q8N5Y2 521 aaKnown RBP23.45■■□□□ 1.34
PLD3-219ENST00000598962 LENG1Q96BZ8 264 aaPredicted RBP23.45■■□□□ 1.34
PLD3-219ENST00000598962 TOX2Q96NM4 488 aa23.45■■□□□ 1.34
PLD3-219ENST00000598962 CNPY2Q9Y2B0 182 aa23.45■■□□□ 1.34
PLD3-219ENST00000598962 RAD21O60216 631 aa23.44■■□□□ 1.34
PLD3-219ENST00000598962 FOSL2P15408 326 aa23.44■■□□□ 1.34
PLD3-219ENST00000598962 FPGSQ05932 587 aa23.44■■□□□ 1.34
PLD3-219ENST00000598962 FAAP100Q0VG06 881 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms