RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 MAGEA10P43363 369 aaPredicted RBP18.83■□□□□ 0.6
SMG9-208ENST00000598886 ATP2B2Q01814 1243 aa18.83■□□□□ 0.6
SMG9-208ENST00000598886 APPBP2Q92624 585 aa18.83■□□□□ 0.6
SMG9-208ENST00000598886 MROH8Q9H579 483 aa18.83■□□□□ 0.6
SMG9-208ENST00000598886 ZNF214Q9UL59 606 aaPredicted RBP18.83■□□□□ 0.6
SMG9-208ENST00000598886 PCDHB15Q9Y5E8 787 aa18.83■□□□□ 0.6
SMG9-208ENST00000598886 LAMA2P24043 3122 aaKnown RBP18.83■□□□□ 0.6
SMG9-208ENST00000598886 SALL3Q9BXA9 1300 aa18.82■□□□□ 0.6
SMG9-208ENST00000598886 M0R2C6 588 aa18.82■□□□□ 0.6
SMG9-208ENST00000598886 PI4K2BQ8TCG2 481 aa18.82■□□□□ 0.6
SMG9-208ENST00000598886 RNF113AO15541 343 aaKnown RBP18.81■□□□□ 0.6
SMG9-208ENST00000598886 MSCO60682 206 aa18.81■□□□□ 0.6
SMG9-208ENST00000598886 OTUD7AQ8TE49 926 aaPredicted RBP18.81■□□□□ 0.6
SMG9-208ENST00000598886 MAML3Q96JK9 1138 aa18.81■□□□□ 0.6
SMG9-208ENST00000598886 PPP1R9AQ9ULJ8 1098 aa18.81■□□□□ 0.6
SMG9-208ENST00000598886 DNM1LO00429 736 aa18.8■□□□□ 0.6
SMG9-208ENST00000598886 VWA5AO00534 786 aa18.8■□□□□ 0.6
SMG9-208ENST00000598886 GPAA1O43292 621 aa18.8■□□□□ 0.6
SMG9-208ENST00000598886 DPP9Q86TI2 863 aa18.8■□□□□ 0.6
SMG9-208ENST00000598886 RIOX2Q8IUF8 465 aa18.8■□□□□ 0.6
SMG9-208ENST00000598886 AMOTL1Q8IY63 956 aa18.8■□□□□ 0.6
SMG9-208ENST00000598886 DDRGK1Q96HY6 314 aa18.8■□□□□ 0.6
SMG9-208ENST00000598886 PLIN4Q96Q06 1357 aa18.8■□□□□ 0.6
SMG9-208ENST00000598886 TTC41PQ6P2S7 1318 aa18.79■□□□□ 0.6
SMG9-208ENST00000598886 FOXP2O15409 715 aa18.79■□□□□ 0.6
SMG9-208ENST00000598886 FAM83BQ5T0W9 1011 aa18.79■□□□□ 0.6
SMG9-208ENST00000598886 NCAPG2Q86XI2 1143 aa18.79■□□□□ 0.6
SMG9-208ENST00000598886 NYAP2Q9P242 653 aa18.79■□□□□ 0.6
SMG9-208ENST00000598886 LRRC37A2A6NM11 1700 aa18.79■□□□□ 0.6
SMG9-208ENST00000598886 MCM3APO60318 1980 aa18.79■□□□□ 0.6
SMG9-208ENST00000598886 SEPT4O43236 478 aa18.78■□□□□ 0.6
SMG9-208ENST00000598886 SLC25A27O95847 323 aa18.78■□□□□ 0.6
SMG9-208ENST00000598886 ZFYP08048 801 aaPredicted RBP18.78■□□□□ 0.6
SMG9-208ENST00000598886 PLS1Q14651 629 aa18.78■□□□□ 0.6
SMG9-208ENST00000598886 SNX17Q15036 470 aa18.78■□□□□ 0.6
SMG9-208ENST00000598886 LRIT3Q3SXY7 679 aa18.78■□□□□ 0.6
SMG9-208ENST00000598886 NUP88Q99567 741 aaPredicted RBP18.78■□□□□ 0.6
SMG9-208ENST00000598886 GOPCQ9HD26 462 aa18.78■□□□□ 0.6
SMG9-208ENST00000598886 LCTP09848 1927 aa18.77■□□□□ 0.6
SMG9-208ENST00000598886 NDUFB10O96000 172 aa18.77■□□□□ 0.6
SMG9-208ENST00000598886 CNGA1P29973 690 aa18.77■□□□□ 0.6
SMG9-208ENST00000598886 ZNF792Q3KQV3 632 aa18.77■□□□□ 0.6
SMG9-208ENST00000598886 PRAMEF19Q5SWL8 479 aa18.77■□□□□ 0.6
SMG9-208ENST00000598886 TDHQ8IZJ6 230 aa18.77■□□□□ 0.6
SMG9-208ENST00000598886 GPATCH3Q96I76 525 aa18.77■□□□□ 0.6
SMG9-208ENST00000598886 SEC62Q99442 399 aaKnown RBP18.77■□□□□ 0.6
SMG9-208ENST00000598886 SENP6Q9GZR1 1112 aaPredicted RBP18.77■□□□□ 0.6
SMG9-208ENST00000598886 PGK2P07205 417 aa18.76■□□□□ 0.59
SMG9-208ENST00000598886 FCER1AP12319 257 aa18.76■□□□□ 0.59
SMG9-208ENST00000598886 GJC2Q5T442 439 aaPredicted RBP18.76■□□□□ 0.59
SMG9-208ENST00000598886 GPR153Q6NV75 609 aa18.76■□□□□ 0.59
SMG9-208ENST00000598886 MKL1Q969V6 931 aa18.76■□□□□ 0.59
SMG9-208ENST00000598886 MINDY4BA8MYZ0 360 aa18.75■□□□□ 0.59
SMG9-208ENST00000598886 F5H6K3 240 aa18.75■□□□□ 0.59
SMG9-208ENST00000598886 GNAT2P19087 354 aa18.75■□□□□ 0.59
SMG9-208ENST00000598886 STAT3P40763 770 aa18.75■□□□□ 0.59
SMG9-208ENST00000598886 KLRC3Q07444 240 aa18.75■□□□□ 0.59
SMG9-208ENST00000598886 FAM47AQ5JRC9 791 aa18.75■□□□□ 0.59
SMG9-208ENST00000598886 ZMYM1Q5SVZ6 1142 aa18.75■□□□□ 0.59
SMG9-208ENST00000598886 ANO1Q5XXA6 986 aa18.75■□□□□ 0.59
SMG9-208ENST00000598886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.75■□□□□ 0.59
SMG9-208ENST00000598886 IFNL3Q8IZI9 196 aa18.75■□□□□ 0.59
SMG9-208ENST00000598886 MMP19Q99542 508 aa18.75■□□□□ 0.59
SMG9-208ENST00000598886 DIS3Q9Y2L1 958 aaKnown RBP18.75■□□□□ 0.59
SMG9-208ENST00000598886 DNAJC25-GNG10A0A024R161 153 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 PATL2C9JE40 543 aaKnown RBP18.74■□□□□ 0.59
SMG9-208ENST00000598886 ATP2A1O14983 1001 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 PRDM1O75626 825 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 TAL1P17542 331 aaPredicted RBP18.74■□□□□ 0.59
SMG9-208ENST00000598886 ATN1P54259 1190 aaPredicted RBP18.74■□□□□ 0.59
SMG9-208ENST00000598886 SAMD1Q6SPF0 538 aaPredicted RBP18.74■□□□□ 0.59
SMG9-208ENST00000598886 STK11IPQ8N1F8 1099 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 CEP95Q96GE4 821 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 SLF1Q9BQI6 1058 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 TINF2Q9BSI4 451 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 SLC5A4Q9NY91 659 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 MTMR4Q9NYA4 1195 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 NRBP1Q9UHY1 535 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 SYNPO2Q9UMS6 1093 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 RIPK3Q9Y572 518 aa18.74■□□□□ 0.59
SMG9-208ENST00000598886 ZNF865P0CJ78 1059 aaPredicted RBP18.73■□□□□ 0.59
SMG9-208ENST00000598886 RTP1P59025 263 aa18.73■□□□□ 0.59
SMG9-208ENST00000598886 MDM2Q00987 491 aaPredicted RBP18.73■□□□□ 0.59
SMG9-208ENST00000598886 LRRC41Q15345 812 aa18.73■□□□□ 0.59
SMG9-208ENST00000598886 ARRDC4Q8NCT1 418 aa18.73■□□□□ 0.59
SMG9-208ENST00000598886 TEX13BQ9BXU2 312 aa18.73■□□□□ 0.59
SMG9-208ENST00000598886 UBE2OQ9C0C9 1292 aaKnown RBP18.73■□□□□ 0.59
SMG9-208ENST00000598886 MKNK2Q9HBH9 465 aa18.73■□□□□ 0.59
SMG9-208ENST00000598886 COPB2P35606 906 aa18.72■□□□□ 0.59
SMG9-208ENST00000598886 TDO2P48775 406 aa18.72■□□□□ 0.59
SMG9-208ENST00000598886 RRP1P56182 461 aaKnown RBP18.72■□□□□ 0.59
SMG9-208ENST00000598886 C1orf53Q5VUE5 145 aa18.72■□□□□ 0.59
SMG9-208ENST00000598886 SLC39A5Q6ZMH5 540 aa18.72■□□□□ 0.59
SMG9-208ENST00000598886 GMCL1P1Q8NEA9 526 aa18.72■□□□□ 0.59
SMG9-208ENST00000598886 FGD4Q96M96 766 aa18.72■□□□□ 0.59
SMG9-208ENST00000598886 CLIP2Q9UDT6 1046 aa18.72■□□□□ 0.59
SMG9-208ENST00000598886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.72■□□□□ 0.59
SMG9-208ENST00000598886 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
SMG9-208ENST00000598886 MX1P20591 662 aa18.71■□□□□ 0.59
SMG9-208ENST00000598886 KCTD2Q14681 263 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms