RNA–Protein interactions for RNA: ENST00000596714.1

SMG9-204, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-204ENST00000596714 PNMA1Q8ND90 353 aa20.3■□□□□ 0.84
SMG9-204ENST00000596714 NKX2-3Q8TAU0 364 aa20.3■□□□□ 0.84
SMG9-204ENST00000596714 ZNF296Q8WUU4 475 aaPredicted RBP20.3■□□□□ 0.84
SMG9-204ENST00000596714 KCNB2Q92953 911 aa20.3■□□□□ 0.84
SMG9-204ENST00000596714 ERO1AQ96HE7 468 aa20.3■□□□□ 0.84
SMG9-204ENST00000596714 TMEM87BQ96K49 555 aa20.3■□□□□ 0.84
SMG9-204ENST00000596714 PRDM10Q9NQV6 1147 aa20.3■□□□□ 0.84
SMG9-204ENST00000596714 FEM1BQ9UK73 627 aa20.3■□□□□ 0.84
SMG9-204ENST00000596714 ADGRA2Q96PE1 1338 aa20.29■□□□□ 0.84
SMG9-204ENST00000596714 IKQ13123 557 aaPredicted RBP20.29■□□□□ 0.84
SMG9-204ENST00000596714 FAM110CQ1W6H9 321 aa20.29■□□□□ 0.84
SMG9-204ENST00000596714 CCDC96Q2M329 555 aa20.29■□□□□ 0.84
SMG9-204ENST00000596714 SAMD1Q6SPF0 538 aaPredicted RBP20.29■□□□□ 0.84
SMG9-204ENST00000596714 TMTC2Q8N394 836 aa20.29■□□□□ 0.84
SMG9-204ENST00000596714 ANKRD13CQ8N6S4 541 aa20.29■□□□□ 0.84
SMG9-204ENST00000596714 MB21D1Q8N884 522 aa20.29■□□□□ 0.84
SMG9-204ENST00000596714 NUP88Q99567 741 aaPredicted RBP20.29■□□□□ 0.84
SMG9-204ENST00000596714 SNX14Q9Y5W7 946 aa20.29■□□□□ 0.84
SMG9-204ENST00000596714 LBX2Q6XYB7 198 aa20.28■□□□□ 0.84
SMG9-204ENST00000596714 DHX32Q7L7V1 743 aaKnown RBP20.28■□□□□ 0.84
SMG9-204ENST00000596714 CHST3Q7LGC8 479 aa20.28■□□□□ 0.84
SMG9-204ENST00000596714 CHURC1Q8WUH1 139 aa20.28■□□□□ 0.84
SMG9-204ENST00000596714 JAKMIP1Q96N16 626 aaKnown RBP20.28■□□□□ 0.84
SMG9-204ENST00000596714 SLF1Q9BQI6 1058 aa20.28■□□□□ 0.84
SMG9-204ENST00000596714 CTDP1Q9Y5B0 961 aaPredicted RBP20.28■□□□□ 0.84
SMG9-204ENST00000596714 WDR19Q8NEZ3 1342 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 SPDYE16A6NNV3 312 aaPredicted RBP20.27■□□□□ 0.84
SMG9-204ENST00000596714 BCRP11274 1271 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 DSG3P32926 999 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 STAT2P52630 851 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 FGD1P98174 961 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 SEC23AQ15436 765 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 C8orf34Q49A92 452 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 BLOC1S2Q6QNY1 142 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 FAM160B2Q86V87 743 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 CCAR1Q8IX12 1150 aaKnown RBP20.27■□□□□ 0.84
SMG9-204ENST00000596714 PRPF38AQ8NAV1 312 aaKnown RBP20.27■□□□□ 0.84
SMG9-204ENST00000596714 GPRC5AQ8NFJ5 357 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 PAGR1Q9BTK6 254 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 PPP1R9AQ9ULJ8 1098 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 RABGAP1Q9Y3P9 1069 aa20.27■□□□□ 0.84
SMG9-204ENST00000596714 TMEM232C9JQI7 657 aa20.26■□□□□ 0.83
SMG9-204ENST00000596714 ANTXR2P58335 489 aa20.26■□□□□ 0.83
SMG9-204ENST00000596714 CCNA1P78396 465 aa20.26■□□□□ 0.83
SMG9-204ENST00000596714 ADCK5Q3MIX3 580 aa20.26■□□□□ 0.83
SMG9-204ENST00000596714 GPATCH4Q5T3I0 446 aaKnown RBP20.26■□□□□ 0.83
SMG9-204ENST00000596714 NFXL1Q6ZNB6 911 aa20.26■□□□□ 0.83
SMG9-204ENST00000596714 CATIPQ7Z7H3 387 aa20.26■□□□□ 0.83
SMG9-204ENST00000596714 CHMP4CQ96CF2 233 aa20.26■□□□□ 0.83
SMG9-204ENST00000596714 UPF2Q9HAU5 1272 aaKnown RBP20.26■□□□□ 0.83
SMG9-204ENST00000596714 CCDC69A6NI79 296 aa20.25■□□□□ 0.83
SMG9-204ENST00000596714 FDX1P10109 184 aa20.25■□□□□ 0.83
SMG9-204ENST00000596714 PDHBP11177 359 aa20.25■□□□□ 0.83
SMG9-204ENST00000596714 LACTBP83111 547 aaPredicted RBP20.25■□□□□ 0.83
SMG9-204ENST00000596714 KCTD1Q719H9 257 aa20.25■□□□□ 0.83
SMG9-204ENST00000596714 IGDCC4Q8TDY8 1250 aa20.25■□□□□ 0.83
SMG9-204ENST00000596714 FBXO28Q9NVF7 368 aa20.25■□□□□ 0.83
SMG9-204ENST00000596714 MORF4L1Q9UBU8 362 aa20.25■□□□□ 0.83
SMG9-204ENST00000596714 PLA2G6O60733 806 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 ZBED4O75132 1171 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 PARP1P09874 1014 aaKnown RBP20.24■□□□□ 0.83
SMG9-204ENST00000596714 CASTP20810 708 aaKnown RBP20.24■□□□□ 0.83
SMG9-204ENST00000596714 LIFRP42702 1097 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 FCGRTP55899 365 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 ANAPC15P60006 121 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 ERVK-9P63128 1117 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 ERVK-24P63145 666 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 ASPRV1Q53RT3 343 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 CD99L2Q8TCZ2 262 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 KIFC2Q96AC6 838 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 ATG4CQ96DT6 458 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 CWC22Q9HCG8 908 aaKnown RBP20.24■□□□□ 0.83
SMG9-204ENST00000596714 RBPJLQ9UBG7 517 aa20.24■□□□□ 0.83
SMG9-204ENST00000596714 SH2B2O14492 632 aaPredicted RBP20.23■□□□□ 0.83
SMG9-204ENST00000596714 FMNL1O95466 1100 aaPredicted RBP20.23■□□□□ 0.83
SMG9-204ENST00000596714 GNRH1P01148 92 aa20.23■□□□□ 0.83
SMG9-204ENST00000596714 SNHG28P0DPA3 235 aa20.23■□□□□ 0.83
SMG9-204ENST00000596714 ZNF543Q08ER8 600 aa20.23■□□□□ 0.83
SMG9-204ENST00000596714 SYNE3Q6ZMZ3 975 aa20.23■□□□□ 0.83
SMG9-204ENST00000596714 LY9Q9HBG7 655 aa20.23■□□□□ 0.83
SMG9-204ENST00000596714 GPCPD1Q9NPB8 672 aa20.23■□□□□ 0.83
SMG9-204ENST00000596714 FRMPD2Q68DX3 1309 aaPredicted RBP20.23■□□□□ 0.83
SMG9-204ENST00000596714 VWA5AO00534 786 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 CALM1P0DP23 149 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 CALM2P0DP24 149 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 CALM3P0DP25 149 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 HOXD10P28358 340 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 PSMC4P43686 418 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 EXOSC10Q01780 885 aaKnown RBP20.22■□□□□ 0.83
SMG9-204ENST00000596714 PLS1Q14651 629 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 LRRC2Q9BYS8 371 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 TM6SF1Q9BZW5 370 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 EFCC1Q9HA90 598 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 TXNRD2Q9NNW7 524 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 ADAMTS5Q9UNA0 930 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 SLC12A7Q9Y666 1083 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 CYP46A1Q9Y6A2 500 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 CASP8AP2Q9UKL3 1982 aa20.22■□□□□ 0.83
SMG9-204ENST00000596714 DDAH1O94760 285 aa20.21■□□□□ 0.83
SMG9-204ENST00000596714 SEC24BO95487 1268 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms