RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 ECHDC1Q9NTX5 307 aa19.32■□□□□ 0.68
LIM2-202ENST00000596399 COL11A1P12107 1806 aaPredicted RBP19.32■□□□□ 0.68
LIM2-202ENST00000596399 GSG1L2A8MUP6 293 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 DNM1LO00429 736 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 MSCO60682 206 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 LRIT3Q3SXY7 679 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 FAM83BQ5T0W9 1011 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 ZSCAN25Q6NSZ9 544 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 DEFB123Q8N688 67 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 OSBP2Q969R2 916 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 DDRGK1Q96HY6 314 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 MAML3Q96JK9 1138 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 KANSL2Q9H9L4 492 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 ADAMTS5Q9UNA0 930 aa19.31■□□□□ 0.68
LIM2-202ENST00000596399 RTP1P59025 263 aa19.3■□□□□ 0.68
LIM2-202ENST00000596399 MINDY4BA8MYZ0 360 aa19.29■□□□□ 0.68
LIM2-202ENST00000596399 VWA5AO00534 786 aa19.29■□□□□ 0.68
LIM2-202ENST00000596399 SEPT4O43236 478 aa19.29■□□□□ 0.68
LIM2-202ENST00000596399 FCER1AP12319 257 aa19.29■□□□□ 0.68
LIM2-202ENST00000596399 RASA1P20936 1047 aa19.29■□□□□ 0.68
LIM2-202ENST00000596399 ABRAQ8N0Z2 381 aa19.29■□□□□ 0.68
LIM2-202ENST00000596399 KBTBD3Q8NAB2 608 aa19.29■□□□□ 0.68
LIM2-202ENST00000596399 REPS2Q8NFH8 660 aa19.29■□□□□ 0.68
LIM2-202ENST00000596399 DCTPP1Q9H773 170 aa19.29■□□□□ 0.68
LIM2-202ENST00000596399 EPB41L4AQ9HCS5 686 aaPredicted RBP19.29■□□□□ 0.68
LIM2-202ENST00000596399 ARPP21Q9UBL0 812 aaPredicted RBP19.29■□□□□ 0.68
LIM2-202ENST00000596399 ATP11BQ9Y2G3 1177 aa19.29■□□□□ 0.68
LIM2-202ENST00000596399 M0R2C6 588 aa19.28■□□□□ 0.68
LIM2-202ENST00000596399 TAL1P17542 331 aaPredicted RBP19.28■□□□□ 0.68
LIM2-202ENST00000596399 FAM47AQ5JRC9 791 aa19.28■□□□□ 0.68
LIM2-202ENST00000596399 SLC17A8Q8NDX2 589 aa19.28■□□□□ 0.68
LIM2-202ENST00000596399 FERMT2Q96AC1 680 aa19.28■□□□□ 0.68
LIM2-202ENST00000596399 MMP19Q99542 508 aa19.28■□□□□ 0.68
LIM2-202ENST00000596399 GOPCQ9HD26 462 aa19.28■□□□□ 0.68
LIM2-202ENST00000596399 PPP1R9AQ9ULJ8 1098 aa19.28■□□□□ 0.68
LIM2-202ENST00000596399 ZNFX1Q9P2E3 1918 aaKnown RBP19.27■□□□□ 0.68
LIM2-202ENST00000596399 RNF113AO15541 343 aaKnown RBP19.27■□□□□ 0.68
LIM2-202ENST00000596399 PRDM1O75626 825 aa19.27■□□□□ 0.68
LIM2-202ENST00000596399 SLC25A27O95847 323 aa19.27■□□□□ 0.68
LIM2-202ENST00000596399 STAT3P40763 770 aa19.27■□□□□ 0.68
LIM2-202ENST00000596399 ADCYAP1R1P41586 468 aa19.27■□□□□ 0.68
LIM2-202ENST00000596399 SBK1Q52WX2 424 aa19.27■□□□□ 0.68
LIM2-202ENST00000596399 SLC39A5Q6ZMH5 540 aa19.27■□□□□ 0.68
LIM2-202ENST00000596399 RIOX2Q8IUF8 465 aa19.27■□□□□ 0.68
LIM2-202ENST00000596399 ARRDC4Q8NCT1 418 aa19.27■□□□□ 0.68
LIM2-202ENST00000596399 SLC5A4Q9NY91 659 aa19.27■□□□□ 0.68
LIM2-202ENST00000596399 ZNF214Q9UL59 606 aaPredicted RBP19.27■□□□□ 0.68
LIM2-202ENST00000596399 A0A0C4DFX4 3053 aa19.27■□□□□ 0.68
LIM2-202ENST00000596399 GREB1LQ9C091 1923 aaPredicted RBP19.27■□□□□ 0.67
LIM2-202ENST00000596399 KBTBD13C9JR72 458 aa19.26■□□□□ 0.67
LIM2-202ENST00000596399 LRRC41Q15345 812 aa19.26■□□□□ 0.67
LIM2-202ENST00000596399 OTUD7AQ8TE49 926 aaPredicted RBP19.26■□□□□ 0.67
LIM2-202ENST00000596399 APPBP2Q92624 585 aa19.26■□□□□ 0.67
LIM2-202ENST00000596399 LENG1Q96BZ8 264 aaPredicted RBP19.26■□□□□ 0.67
LIM2-202ENST00000596399 SEC62Q99442 399 aaKnown RBP19.26■□□□□ 0.67
LIM2-202ENST00000596399 MKNK2Q9HBH9 465 aa19.26■□□□□ 0.67
LIM2-202ENST00000596399 F5H6K3 240 aa19.25■□□□□ 0.67
LIM2-202ENST00000596399 GPAA1O43292 621 aa19.25■□□□□ 0.67
LIM2-202ENST00000596399 NDUFB10O96000 172 aa19.25■□□□□ 0.67
LIM2-202ENST00000596399 KLRC3Q07444 240 aa19.25■□□□□ 0.67
LIM2-202ENST00000596399 ZNF792Q3KQV3 632 aa19.25■□□□□ 0.67
LIM2-202ENST00000596399 TRIM60Q495X7 471 aa19.25■□□□□ 0.67
LIM2-202ENST00000596399 LBHD1Q9BQE6 289 aaPredicted RBP19.25■□□□□ 0.67
LIM2-202ENST00000596399 PRDM5Q9NQX1 630 aaPredicted RBP19.25■□□□□ 0.67
LIM2-202ENST00000596399 MTMR10Q9NXD2 777 aa19.25■□□□□ 0.67
LIM2-202ENST00000596399 CLIP2Q9UDT6 1046 aa19.25■□□□□ 0.67
LIM2-202ENST00000596399 RIPK3Q9Y572 518 aa19.25■□□□□ 0.67
LIM2-202ENST00000596399 APPP05067 770 aa19.24■□□□□ 0.67
LIM2-202ENST00000596399 SLC4A3P48751 1232 aa19.24■□□□□ 0.67
LIM2-202ENST00000596399 KCTD2Q14681 263 aa19.24■□□□□ 0.67
LIM2-202ENST00000596399 GPR153Q6NV75 609 aa19.24■□□□□ 0.67
LIM2-202ENST00000596399 SH3RF1Q7Z6J0 888 aa19.24■□□□□ 0.67
LIM2-202ENST00000596399 TINF2Q9BSI4 451 aa19.24■□□□□ 0.67
LIM2-202ENST00000596399 NYAP2Q9P242 653 aa19.24■□□□□ 0.67
LIM2-202ENST00000596399 PCDHB15Q9Y5E8 787 aa19.24■□□□□ 0.67
LIM2-202ENST00000596399 SMCHD1A6NHR9 2005 aa19.24■□□□□ 0.67
LIM2-202ENST00000596399 LTBP2Q14767 1821 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 ROBO3Q96MS0 1386 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 PLXNA1Q9UIW2 1896 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 IGKV6D-41A0A0C4DH26 115 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 PGK1P00558 417 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 TDO2P48775 406 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 SNRNP48Q6IEG0 339 aaKnown RBP19.23■□□□□ 0.67
LIM2-202ENST00000596399 GIMAP6Q6P9H5 292 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 CHMP4CQ96CF2 233 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 GPATCH3Q96I76 525 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 SLF1Q9BQI6 1058 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 XPNPEP3Q9NQH7 507 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 PRKAG2Q9UGJ0 569 aa19.23■□□□□ 0.67
LIM2-202ENST00000596399 TRIM43BA6NCK2 446 aa19.22■□□□□ 0.67
LIM2-202ENST00000596399 ZNF865P0CJ78 1059 aaPredicted RBP19.22■□□□□ 0.67
LIM2-202ENST00000596399 SNX17Q15036 470 aa19.22■□□□□ 0.67
LIM2-202ENST00000596399 BADQ92934 168 aa19.22■□□□□ 0.67
LIM2-202ENST00000596399 TRIM43Q96BQ3 446 aaPredicted RBP19.22■□□□□ 0.67
LIM2-202ENST00000596399 CEP95Q96GE4 821 aa19.22■□□□□ 0.67
LIM2-202ENST00000596399 C9orf50Q5SZB4 431 aa19.21■□□□□ 0.67
LIM2-202ENST00000596399 IFNL3Q8IZI9 196 aa19.21■□□□□ 0.67
LIM2-202ENST00000596399 CPXCR1Q8N123 301 aa19.21■□□□□ 0.67
LIM2-202ENST00000596399 LRRC47Q8N1G4 583 aaKnown RBP19.21■□□□□ 0.67
LIM2-202ENST00000596399 PI4K2BQ8TCG2 481 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms