RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 HMGCRP04035 888 aa18.72■□□□□ 0.59
ZNF550-207ENST00000595560 KLRC3Q07444 240 aa18.72■□□□□ 0.59
ZNF550-207ENST00000595560 PPP4R3BQ5MIZ7 849 aa18.72■□□□□ 0.59
ZNF550-207ENST00000595560 GMCL1P1Q8NEA9 526 aa18.72■□□□□ 0.59
ZNF550-207ENST00000595560 SPATC1LQ9H0A9 340 aa18.72■□□□□ 0.59
ZNF550-207ENST00000595560 CWC22Q9HCG8 908 aaKnown RBP18.72■□□□□ 0.59
ZNF550-207ENST00000595560 ADAMTS5Q9UNA0 930 aa18.72■□□□□ 0.59
ZNF550-207ENST00000595560 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
ZNF550-207ENST00000595560 GJB1P08034 283 aa18.71■□□□□ 0.59
ZNF550-207ENST00000595560 PCP11498 1178 aaKnown RBP18.71■□□□□ 0.59
ZNF550-207ENST00000595560 RGS2P41220 211 aa18.71■□□□□ 0.59
ZNF550-207ENST00000595560 SHCBP1Q8NEM2 672 aa18.71■□□□□ 0.59
ZNF550-207ENST00000595560 NKX2-3Q8TAU0 364 aa18.71■□□□□ 0.59
ZNF550-207ENST00000595560 APBA2Q99767 749 aa18.71■□□□□ 0.59
ZNF550-207ENST00000595560 MOV10L1Q9BXT6 1211 aaKnown RBP18.71■□□□□ 0.59
ZNF550-207ENST00000595560 RNF208Q9H0X6 261 aa18.71■□□□□ 0.59
ZNF550-207ENST00000595560 INCENPQ9NQS7 918 aa18.71■□□□□ 0.59
ZNF550-207ENST00000595560 FBXO28Q9NVF7 368 aa18.71■□□□□ 0.59
ZNF550-207ENST00000595560 PPP1R9AQ9ULJ8 1098 aa18.71■□□□□ 0.59
ZNF550-207ENST00000595560 SLC15A5A6NIM6 579 aa18.7■□□□□ 0.58
ZNF550-207ENST00000595560 CYP2B6P20813 491 aa18.7■□□□□ 0.58
ZNF550-207ENST00000595560 MAP2K5Q13163 448 aa18.7■□□□□ 0.58
ZNF550-207ENST00000595560 WDR78Q5VTH9 848 aa18.7■□□□□ 0.58
ZNF550-207ENST00000595560 TRMT44Q8IYL2 757 aaKnown RBP18.7■□□□□ 0.58
ZNF550-207ENST00000595560 LRRC47Q8N1G4 583 aaKnown RBP18.7■□□□□ 0.58
ZNF550-207ENST00000595560 TRIB2Q92519 343 aa18.7■□□□□ 0.58
ZNF550-207ENST00000595560 NUP88Q99567 741 aaPredicted RBP18.7■□□□□ 0.58
ZNF550-207ENST00000595560 NBPF3Q9H094 633 aa18.7■□□□□ 0.58
ZNF550-207ENST00000595560 UNC93B1Q9H1C4 597 aa18.7■□□□□ 0.58
ZNF550-207ENST00000595560 IVNS1ABPQ9Y6Y0 642 aa18.7■□□□□ 0.58
ZNF550-207ENST00000595560 VWA5AO00534 786 aa18.69■□□□□ 0.58
ZNF550-207ENST00000595560 RANBP6O60518 1105 aaKnown RBP18.69■□□□□ 0.58
ZNF550-207ENST00000595560 PTPREP23469 700 aa18.69■□□□□ 0.58
ZNF550-207ENST00000595560 GJA8P48165 433 aa18.69■□□□□ 0.58
ZNF550-207ENST00000595560 GRB14Q14449 540 aa18.69■□□□□ 0.58
ZNF550-207ENST00000595560 STAG1Q8WVM7 1258 aa18.69■□□□□ 0.58
ZNF550-207ENST00000595560 SHISA4Q96DD7 197 aa18.69■□□□□ 0.58
ZNF550-207ENST00000595560 SLF1Q9BQI6 1058 aa18.69■□□□□ 0.58
ZNF550-207ENST00000595560 DSCC1Q9BVC3 393 aa18.69■□□□□ 0.58
ZNF550-207ENST00000595560 IL17RBQ9NRM6 502 aa18.69■□□□□ 0.58
ZNF550-207ENST00000595560 RAD50Q92878 1312 aa18.69■□□□□ 0.58
ZNF550-207ENST00000595560 ERCC3P19447 782 aa18.68■□□□□ 0.58
ZNF550-207ENST00000595560 NOVP48745 357 aa18.68■□□□□ 0.58
ZNF550-207ENST00000595560 HAND2P61296 217 aa18.68■□□□□ 0.58
ZNF550-207ENST00000595560 PLS1Q14651 629 aa18.68■□□□□ 0.58
ZNF550-207ENST00000595560 TMEM132BQ14DG7 1078 aa18.68■□□□□ 0.58
ZNF550-207ENST00000595560 AKNAD1Q5T1N1 836 aa18.68■□□□□ 0.58
ZNF550-207ENST00000595560 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
ZNF550-207ENST00000595560 TBC1D10CQ8IV04 446 aa18.68■□□□□ 0.58
ZNF550-207ENST00000595560 MROH8Q9H579 483 aa18.68■□□□□ 0.58
ZNF550-207ENST00000595560 PAK6Q9NQU5 681 aaPredicted RBP18.68■□□□□ 0.58
ZNF550-207ENST00000595560 TOMM22Q9NS69 142 aa18.68■□□□□ 0.58
ZNF550-207ENST00000595560 STX8Q9UNK0 236 aa18.68■□□□□ 0.58
ZNF550-207ENST00000595560 ZNFX1Q9P2E3 1918 aaKnown RBP18.68■□□□□ 0.58
ZNF550-207ENST00000595560 STRNO43815 780 aa18.67■□□□□ 0.58
ZNF550-207ENST00000595560 NMT2O60551 498 aa18.67■□□□□ 0.58
ZNF550-207ENST00000595560 HOXC6P09630 235 aa18.67■□□□□ 0.58
ZNF550-207ENST00000595560 ZKSCAN1P17029 563 aaPredicted RBP18.67■□□□□ 0.58
ZNF550-207ENST00000595560 MFSD6Q6ZSS7 791 aa18.67■□□□□ 0.58
ZNF550-207ENST00000595560 CENPQQ7L2Z9 268 aaPredicted RBP18.67■□□□□ 0.58
ZNF550-207ENST00000595560 PRPF38AQ8NAV1 312 aaKnown RBP18.67■□□□□ 0.58
ZNF550-207ENST00000595560 REPS2Q8NFH8 660 aa18.67■□□□□ 0.58
ZNF550-207ENST00000595560 U2AF1L4Q8WU68 220 aaKnown RBP18.67■□□□□ 0.58
ZNF550-207ENST00000595560 GMCL1Q96IK5 515 aa18.67■□□□□ 0.58
ZNF550-207ENST00000595560 IL25Q9H293 177 aa18.67■□□□□ 0.58
ZNF550-207ENST00000595560 RNF41Q9H4P4 317 aaPredicted RBP18.67■□□□□ 0.58
ZNF550-207ENST00000595560 FEM1BQ9UK73 627 aa18.67■□□□□ 0.58
ZNF550-207ENST00000595560 ZNF214Q9UL59 606 aaPredicted RBP18.67■□□□□ 0.58
ZNF550-207ENST00000595560 ZNF213O14771 459 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 SLC25A27O95847 323 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 CAPN2P17655 700 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 NT5C2P49902 561 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 TRIM32Q13049 653 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 RRP12Q5JTH9 1297 aaKnown RBP18.66■□□□□ 0.58
ZNF550-207ENST00000595560 MAP3K21Q5TCX8 1036 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 SLFN13Q68D06 897 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 RIOX2Q8IUF8 465 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 ABRAQ8N0Z2 381 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 RUFY2Q8WXA3 655 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.66■□□□□ 0.58
ZNF550-207ENST00000595560 TCP11L1Q9NUJ3 509 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 RPTORQ8N122 1335 aa18.66■□□□□ 0.58
ZNF550-207ENST00000595560 SGPL1O95470 568 aa18.65■□□□□ 0.58
ZNF550-207ENST00000595560 BMP3P12645 472 aa18.65■□□□□ 0.58
ZNF550-207ENST00000595560 CHMLP26374 656 aa18.65■□□□□ 0.58
ZNF550-207ENST00000595560 COPB2P35606 906 aa18.65■□□□□ 0.58
ZNF550-207ENST00000595560 CCL14Q16627 93 aa18.65■□□□□ 0.58
ZNF550-207ENST00000595560 NCAPG2Q86XI2 1143 aa18.65■□□□□ 0.58
ZNF550-207ENST00000595560 HMX1Q9NP08 348 aaPredicted RBP18.65■□□□□ 0.58
ZNF550-207ENST00000595560 CTNNA3Q9UI47 895 aa18.65■□□□□ 0.58
ZNF550-207ENST00000595560 PLXNA1Q9UIW2 1896 aa18.65■□□□□ 0.58
ZNF550-207ENST00000595560 ATP2A1O14983 1001 aa18.64■□□□□ 0.57
ZNF550-207ENST00000595560 PRKAR2AP13861 404 aaKnown RBP18.64■□□□□ 0.57
ZNF550-207ENST00000595560 ADORA2AP29274 412 aa18.64■□□□□ 0.57
ZNF550-207ENST00000595560 STAT3P40763 770 aa18.64■□□□□ 0.57
ZNF550-207ENST00000595560 SLC1A4P43007 532 aa18.64■□□□□ 0.57
ZNF550-207ENST00000595560 DEFB118Q96PH6 123 aa18.64■□□□□ 0.57
ZNF550-207ENST00000595560 TEX13BQ9BXU2 312 aa18.64■□□□□ 0.57
ZNF550-207ENST00000595560 NEDD4P46934 1319 aa18.64■□□□□ 0.57
ZNF550-207ENST00000595560 FRMPD3Q5JV73 1810 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms