RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 CYB5R4Q7L1T6 521 aa18.14■□□□□ 0.5
USE1-206ENST00000595101 TMEM47Q9BQJ4 181 aa18.14■□□□□ 0.5
USE1-206ENST00000595101 PCP11498 1178 aaKnown RBP18.14■□□□□ 0.49
USE1-206ENST00000595101 FCGRTP55899 365 aa18.14■□□□□ 0.49
USE1-206ENST00000595101 PKN2Q16513 984 aaKnown RBP18.14■□□□□ 0.49
USE1-206ENST00000595101 GMCL1P1Q8NEA9 526 aa18.14■□□□□ 0.49
USE1-206ENST00000595101 HOXC10Q9NYD6 342 aa18.14■□□□□ 0.49
USE1-206ENST00000595101 SRRDQ9UH36 339 aa18.14■□□□□ 0.49
USE1-206ENST00000595101 RABGAP1Q9Y3P9 1069 aa18.14■□□□□ 0.49
USE1-206ENST00000595101 E7EWF7 191 aa18.13■□□□□ 0.49
USE1-206ENST00000595101 TNPO2O14787 897 aaKnown RBP18.13■□□□□ 0.49
USE1-206ENST00000595101 NECTIN1Q15223 517 aa18.12■□□□□ 0.49
USE1-206ENST00000595101 KCTD1Q719H9 257 aa18.12■□□□□ 0.49
USE1-206ENST00000595101 CHST3Q7LGC8 479 aa18.12■□□□□ 0.49
USE1-206ENST00000595101 PPP1R9AQ9ULJ8 1098 aa18.12■□□□□ 0.49
USE1-206ENST00000595101 RLFQ13129 1914 aa18.12■□□□□ 0.49
USE1-206ENST00000595101 SLC27A2O14975 620 aa18.12■□□□□ 0.49
USE1-206ENST00000595101 FLT3LGP49771 235 aa18.12■□□□□ 0.49
USE1-206ENST00000595101 TMEM132BQ14DG7 1078 aa18.12■□□□□ 0.49
USE1-206ENST00000595101 MYPNQ86TC9 1320 aa18.11■□□□□ 0.49
USE1-206ENST00000595101 VWA5AO00534 786 aa18.11■□□□□ 0.49
USE1-206ENST00000595101 SLC1A4P43007 532 aa18.11■□□□□ 0.49
USE1-206ENST00000595101 CREB3L3Q68CJ9 461 aa18.11■□□□□ 0.49
USE1-206ENST00000595101 ENAHQ8N8S7 591 aaPredicted RBP18.11■□□□□ 0.49
USE1-206ENST00000595101 ZSCAN10Q96SZ4 725 aaPredicted RBP18.11■□□□□ 0.49
USE1-206ENST00000595101 KRT23Q9C075 422 aa18.11■□□□□ 0.49
USE1-206ENST00000595101 GJD2Q9UKL4 321 aa18.11■□□□□ 0.49
USE1-206ENST00000595101 ISY1Q9ULR0 285 aaKnown RBP18.11■□□□□ 0.49
USE1-206ENST00000595101 SYNPO2Q9UMS6 1093 aa18.11■□□□□ 0.49
USE1-206ENST00000595101 ADAMTS5Q9UNA0 930 aa18.11■□□□□ 0.49
USE1-206ENST00000595101 LAMA4Q16363 1823 aa18.11■□□□□ 0.49
USE1-206ENST00000595101 CCDC85CA6NKD9 419 aa18.1■□□□□ 0.49
USE1-206ENST00000595101 TMEM232C9JQI7 657 aa18.1■□□□□ 0.49
USE1-206ENST00000595101 TOP1P11387 765 aaKnown RBP18.1■□□□□ 0.49
USE1-206ENST00000595101 BMP3P12645 472 aa18.1■□□□□ 0.49
USE1-206ENST00000595101 PLS1Q14651 629 aa18.1■□□□□ 0.49
USE1-206ENST00000595101 ARHGEF6Q15052 776 aa18.1■□□□□ 0.49
USE1-206ENST00000595101 CASC1Q6TDU7 716 aa18.1■□□□□ 0.49
USE1-206ENST00000595101 SH3TC2Q8TF17 1288 aa18.1■□□□□ 0.49
USE1-206ENST00000595101 GTF3C2Q8WUA4 911 aaPredicted RBP18.1■□□□□ 0.49
USE1-206ENST00000595101 KIFC2Q96AC6 838 aa18.1■□□□□ 0.49
USE1-206ENST00000595101 MOV10L1Q9BXT6 1211 aaKnown RBP18.1■□□□□ 0.49
USE1-206ENST00000595101 CNNM2Q9H8M5 875 aa18.1■□□□□ 0.49
USE1-206ENST00000595101 SENP2Q9HC62 589 aa18.1■□□□□ 0.49
USE1-206ENST00000595101 TNKSO95271 1327 aa18.1■□□□□ 0.49
USE1-206ENST00000595101 TTBK2Q6IQ55 1244 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 GPR142Q7Z601 462 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 REPS2Q8NFH8 660 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 GMCL1Q96IK5 515 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 SLF1Q9BQI6 1058 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 SPATC1LQ9H0A9 340 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 MYH4Q9Y623 1939 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 MKI67P46013 3256 aaKnown RBP18.09■□□□□ 0.49
USE1-206ENST00000595101 FRMPD2Q68DX3 1309 aaPredicted RBP18.09■□□□□ 0.49
USE1-206ENST00000595101 MYCP01106 439 aaPredicted RBP18.09■□□□□ 0.49
USE1-206ENST00000595101 GNRH1P01148 92 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 ANTXR2P58335 489 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 SNAP25P60880 206 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 WDR78Q5VTH9 848 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 IQCA1Q86XH1 822 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 TTC14Q96N46 770 aa18.09■□□□□ 0.49
USE1-206ENST00000595101 HOXD10P28358 340 aa18.08■□□□□ 0.48
USE1-206ENST00000595101 SLC16A2P36021 539 aa18.08■□□□□ 0.48
USE1-206ENST00000595101 PPP4R3BQ5MIZ7 849 aa18.08■□□□□ 0.48
USE1-206ENST00000595101 DGKHQ86XP1 1220 aa18.08■□□□□ 0.48
USE1-206ENST00000595101 RASEFQ8IZ41 740 aa18.08■□□□□ 0.48
USE1-206ENST00000595101 RAET1EQ8TD07 263 aa18.08■□□□□ 0.48
USE1-206ENST00000595101 COA7Q96BR5 231 aa18.08■□□□□ 0.48
USE1-206ENST00000595101 GPHNQ9NQX3 736 aaPredicted RBP18.08■□□□□ 0.48
USE1-206ENST00000595101 PDHBP11177 359 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 ELNP15502 786 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 ERCC3P19447 782 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 TRDNQ13061 729 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 SEC23AQ15436 765 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 MB21D2Q8IYB1 491 aaPredicted RBP18.07■□□□□ 0.48
USE1-206ENST00000595101 PRPF38AQ8NAV1 312 aaKnown RBP18.07■□□□□ 0.48
USE1-206ENST00000595101 NCOA7Q8NI08 942 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 GPCPD1Q9NPB8 672 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 FEM1BQ9UK73 627 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 ZNF214Q9UL59 606 aaPredicted RBP18.07■□□□□ 0.48
USE1-206ENST00000595101 DOCK3Q8IZD9 2030 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 GOLGA8HP0CJ92 632 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 MAPK4P31152 587 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 CCDC96Q2M329 555 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 PLEKHH3Q7Z736 793 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 CCAR1Q8IX12 1150 aaKnown RBP18.07■□□□□ 0.48
USE1-206ENST00000595101 MB21D1Q8N884 522 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 ANKS1AQ92625 1134 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 UBAC1Q9BSL1 405 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 CPVLQ9H3G5 476 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 RIPK3Q9Y572 518 aa18.07■□□□□ 0.48
USE1-206ENST00000595101 TAL1P17542 331 aaPredicted RBP18.06■□□□□ 0.48
USE1-206ENST00000595101 STAT2P52630 851 aa18.06■□□□□ 0.48
USE1-206ENST00000595101 IKQ13123 557 aaPredicted RBP18.06■□□□□ 0.48
USE1-206ENST00000595101 ADCK5Q3MIX3 580 aa18.06■□□□□ 0.48
USE1-206ENST00000595101 SLC9C1Q4G0N8 1177 aa18.06■□□□□ 0.48
USE1-206ENST00000595101 IFFO2Q5TF58 517 aa18.06■□□□□ 0.48
USE1-206ENST00000595101 RALYLQ86SE5 291 aaKnown RBP18.06■□□□□ 0.48
USE1-206ENST00000595101 CPXCR1Q8N123 301 aa18.06■□□□□ 0.48
USE1-206ENST00000595101 PNMA1Q8ND90 353 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms