RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 KRT40Q6A162 431 aa15.27■□□□□ 0.04
VRK3-205ENST00000593919 FAM43AQ8N2R8 423 aa15.27■□□□□ 0.04
VRK3-205ENST00000593919 TMEM87AQ8NBN3 555 aa15.27■□□□□ 0.04
VRK3-205ENST00000593919 RGS22Q8NE09 1264 aa15.27■□□□□ 0.04
VRK3-205ENST00000593919 MKL1Q969V6 931 aa15.27■□□□□ 0.04
VRK3-205ENST00000593919 L3MBTL3Q96JM7 780 aaPredicted RBP15.27■□□□□ 0.04
VRK3-205ENST00000593919 ZBTB21Q9ULJ3 1066 aa15.27■□□□□ 0.04
VRK3-205ENST00000593919 CYTH3O43739 400 aa15.27■□□□□ 0.03
VRK3-205ENST00000593919 CAP2P40123 477 aa15.27■□□□□ 0.03
VRK3-205ENST00000593919 LRSAM1Q6UWE0 723 aa15.27■□□□□ 0.03
VRK3-205ENST00000593919 PIBF1Q8WXW3 757 aa15.27■□□□□ 0.03
VRK3-205ENST00000593919 CPVLQ9H3G5 476 aa15.27■□□□□ 0.03
VRK3-205ENST00000593919 FRMPD2Q68DX3 1309 aaPredicted RBP15.26■□□□□ 0.03
VRK3-205ENST00000593919 PHF20L1A8MW92 1017 aa15.26■□□□□ 0.03
VRK3-205ENST00000593919 TRIM29Q14134 588 aa15.26■□□□□ 0.03
VRK3-205ENST00000593919 ASPRV1Q53RT3 343 aa15.26■□□□□ 0.03
VRK3-205ENST00000593919 PRAMEF18Q5VWM3 479 aa15.26■□□□□ 0.03
VRK3-205ENST00000593919 PAXIP1Q6ZW49 1069 aaPredicted RBP15.26■□□□□ 0.03
VRK3-205ENST00000593919 SYAP1Q96A49 352 aaPredicted RBP15.26■□□□□ 0.03
VRK3-205ENST00000593919 RBSNQ9H1K0 784 aa15.26■□□□□ 0.03
VRK3-205ENST00000593919 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.26■□□□□ 0.03
VRK3-205ENST00000593919 DOCK1Q14185 1865 aa15.26■□□□□ 0.03
VRK3-205ENST00000593919 PITPNM2Q9BZ72 1349 aa15.26■□□□□ 0.03
VRK3-205ENST00000593919 GLTPD2A6NH11 291 aa15.25■□□□□ 0.03
VRK3-205ENST00000593919 KIF23Q02241 960 aaPredicted RBP15.25■□□□□ 0.03
VRK3-205ENST00000593919 SHISA4Q96DD7 197 aa15.25■□□□□ 0.03
VRK3-205ENST00000593919 LZTS2Q9BRK4 669 aa15.25■□□□□ 0.03
VRK3-205ENST00000593919 SPZ1Q9BXG8 430 aa15.25■□□□□ 0.03
VRK3-205ENST00000593919 KIF28PB7ZC32 967 aa15.25■□□□□ 0.03
VRK3-205ENST00000593919 ZNF543Q08ER8 600 aa15.25■□□□□ 0.03
VRK3-205ENST00000593919 VPS54Q9P1Q0 977 aa15.25■□□□□ 0.03
VRK3-205ENST00000593919 KCNJ14Q9UNX9 436 aa15.25■□□□□ 0.03
VRK3-205ENST00000593919 A0A1W2PRG0 241 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 RAD21O60216 631 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 MMP1P03956 469 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 SCG2P13521 617 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 VEGFAP15692 232 aaPredicted RBP15.24■□□□□ 0.03
VRK3-205ENST00000593919 PFKFB3Q16875 520 aaPredicted RBP15.24■□□□□ 0.03
VRK3-205ENST00000593919 ANP32BQ92688 251 aaKnown RBP15.24■□□□□ 0.03
VRK3-205ENST00000593919 PPP2R3BQ9Y5P8 575 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 SSC5DA1L4H1 1573 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 ASNSP08243 561 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 XBP1P17861 261 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 ECE1P42892 770 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 CCDC96Q2M329 555 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 GPATCH4Q5T3I0 446 aaKnown RBP15.24■□□□□ 0.03
VRK3-205ENST00000593919 KCTD1Q719H9 257 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 GMCL1P1Q8NEA9 526 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 UBA5Q9GZZ9 404 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 ARHGEF10LQ9HCE6 1279 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 GPCPD1Q9NPB8 672 aa15.24■□□□□ 0.03
VRK3-205ENST00000593919 F5H6K3 240 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 SMARCA1P28370 1054 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 EPHX2P34913 555 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 SLC1A4P43007 532 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 UBE2HP62256 183 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 KRT85P78386 507 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 KLRC3Q07444 240 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 CSPP1Q1MSJ5 1256 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 DCAF15Q66K64 600 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 SLFN13Q68D06 897 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 ACER1Q8TDN7 264 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 RRAGDQ9NQL2 400 aaPredicted RBP15.23■□□□□ 0.03
VRK3-205ENST00000593919 WDR90Q96KV7 1748 aa15.23■□□□□ 0.03
VRK3-205ENST00000593919 CCDC173Q0VFZ6 552 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 BRAPQ7Z569 592 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 CCDC84Q86UT8 332 aaPredicted RBP15.22■□□□□ 0.03
VRK3-205ENST00000593919 DCAF4Q8WV16 495 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 GPKOWQ92917 476 aaPredicted RBP eCLIP15.22■□□□□ 0.03
VRK3-205ENST00000593919 DCPSQ96C86 337 aaKnown RBP15.22■□□□□ 0.03
VRK3-205ENST00000593919 HOOK2Q96ED9 719 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 PHF20Q9BVI0 1012 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 RIOX1Q9H6W3 641 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 SYNPO2Q9UMS6 1093 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 FZD1Q9UP38 647 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 CTNND1O60716 968 aaKnown RBP15.22■□□□□ 0.03
VRK3-205ENST00000593919 NDUFB10O96000 172 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 U2AF2P26368 475 aaKnown RBP eCLIP15.22■□□□□ 0.03
VRK3-205ENST00000593919 INPP5BP32019 993 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 GNL2Q13823 731 aaKnown RBP15.22■□□□□ 0.03
VRK3-205ENST00000593919 SAFBQ15424 915 aaKnown RBP eCLIP15.22■□□□□ 0.03
VRK3-205ENST00000593919 TTBK2Q6IQ55 1244 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 USP50Q70EL3 339 aaPredicted RBP15.22■□□□□ 0.03
VRK3-205ENST00000593919 HOMER1Q86YM7 354 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 DIS3L2Q8IYB7 885 aaKnown RBP15.22■□□□□ 0.03
VRK3-205ENST00000593919 TRIM44Q96DX7 344 aaPredicted RBP15.22■□□□□ 0.03
VRK3-205ENST00000593919 ZNF341Q9BYN7 854 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 VAT1LQ9HCJ6 419 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 TFIP11Q9UBB9 837 aaKnown RBP15.22■□□□□ 0.03
VRK3-205ENST00000593919 TMX2Q9Y320 296 aa15.22■□□□□ 0.03
VRK3-205ENST00000593919 BTBD18B2RXH4 712 aa15.21■□□□□ 0.03
VRK3-205ENST00000593919 SULF1Q8IWU6 871 aa15.21■□□□□ 0.03
VRK3-205ENST00000593919 RRP36Q96EU6 259 aaKnown RBP15.21■□□□□ 0.03
VRK3-205ENST00000593919 PIGSQ96S52 555 aa15.21■□□□□ 0.03
VRK3-205ENST00000593919 GLIS2Q9BZE0 524 aaPredicted RBP15.21■□□□□ 0.03
VRK3-205ENST00000593919 TSPY26PQ9H489 355 aa15.21■□□□□ 0.03
VRK3-205ENST00000593919 PHIPQ8WWQ0 1821 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 OTOFQ9HC10 1997 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 ADM5C9JUS6 153 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 SLC16A2P36021 539 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms