RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 CIAO1O76071 339 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 GOLGA6DP0CG33 693 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 ERCC6LQ2NKX8 1250 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 SLC9C1Q4G0N8 1177 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 NSUN7Q8NE18 718 aaKnown RBP14.14□□□□□ -0.15
DNMT1-228ENST00000592705 AP5M1Q9H0R1 490 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 GOLGA6AQ9NYA3 693 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 PNMA3Q9UL41 463 aa14.14□□□□□ -0.15
DNMT1-228ENST00000592705 KIAA1524Q8TCG1 905 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 TMEM106CQ9BVX2 250 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 POLR3EQ9NVU0 708 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 TLR7Q9NYK1 1049 aaKnown RBP14.13□□□□□ -0.15
DNMT1-228ENST00000592705 CYP21A2P08686 494 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 ADD1P35611 737 aaKnown RBP14.13□□□□□ -0.15
DNMT1-228ENST00000592705 DCAF17Q5H9S7 520 aaPredicted RBP14.13□□□□□ -0.15
DNMT1-228ENST00000592705 TTLL7Q6ZT98 887 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 CCDC84Q86UT8 332 aaPredicted RBP14.13□□□□□ -0.15
DNMT1-228ENST00000592705 IPO4Q8TEX9 1081 aaKnown RBP14.13□□□□□ -0.15
DNMT1-228ENST00000592705 LRRC45Q96CN5 670 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 MTUS1Q9ULD2 1270 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 ASIC2Q16515 512 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 HAUS3Q68CZ6 603 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 TMEM110-MUSTN1A8MSY1 372 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 PPP6R2O75170 966 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 TXKP42681 527 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 C6orf163Q5TEZ5 329 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 PI4K2BQ8TCG2 481 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 KIFC2Q96AC6 838 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 LRWD1Q9UFC0 647 aa14.13□□□□□ -0.15
DNMT1-228ENST00000592705 CARMIL3Q8ND23 1372 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 ATP2A1O14983 1001 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 PDE6AP16499 860 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 USP14P54578 494 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 PROSER3Q2NL68 480 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 NLRX1Q86UT6 975 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 ZBTB9Q96C00 473 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 BLZF1Q9H2G9 400 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 FANCLQ9NW38 375 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 RCOR1Q9UKL0 485 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 STK24Q9Y6E0 443 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 CETN3O15182 167 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 MAGEA1P43355 309 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 SLC39A14Q15043 492 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 ZNF589Q86UQ0 364 aaPredicted RBP14.12□□□□□ -0.15
DNMT1-228ENST00000592705 FANCBQ8NB91 859 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 UBLCP1Q8WVY7 318 aaPredicted RBP14.12□□□□□ -0.15
DNMT1-228ENST00000592705 GLG1Q92896 1179 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 SRP68Q9UHB9 627 aaKnown RBP14.12□□□□□ -0.15
DNMT1-228ENST00000592705 GOLGA6BA6NDN3 693 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 LRRC24Q50LG9 513 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 CABP7Q86V35 215 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 SLC16A10Q8TF71 515 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 MLXIPQ9HAP2 919 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 NRBP1Q9UHY1 535 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 FRMD4BQ9Y2L6 1034 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 IKBKBO14920 756 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 CALUO43852 315 aaPredicted RBP14.12□□□□□ -0.15
DNMT1-228ENST00000592705 UBE3CQ15386 1083 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 CLEC17AQ6ZS10 378 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 CCDC114Q96M63 670 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 NUCKS1Q9H1E3 243 aaKnown RBP14.12□□□□□ -0.15
DNMT1-228ENST00000592705 COMMD10Q9Y6G5 202 aa14.12□□□□□ -0.15
DNMT1-228ENST00000592705 STX10O60499 249 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 FLOT1O75955 427 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 PIGBQ92521 554 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 MADDQ8WXG6 1647 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 MKRN3Q13064 507 aaKnown RBP14.11□□□□□ -0.15
DNMT1-228ENST00000592705 CALCOCO2Q13137 446 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 CERKLQ49MI3 558 aaPredicted RBP14.11□□□□□ -0.15
DNMT1-228ENST00000592705 SEL1L2Q5TEA6 688 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 OR8K1Q8NGG5 319 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 IFT74Q96LB3 600 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 ZSCAN10Q96SZ4 725 aaPredicted RBP14.11□□□□□ -0.15
DNMT1-228ENST00000592705 KCNJ18B7U540 433 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
DNMT1-228ENST00000592705 KCNJ12Q14500 433 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 NECTIN1Q15223 517 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 SAMD15Q9P1V8 674 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 SAR1BQ9Y6B6 198 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 LONRF3Q496Y0 759 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 SPATA1Q5VX52 437 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 CLEC4GQ6UXB4 293 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 PPP1R13BQ96KQ4 1090 aa14.11□□□□□ -0.15
DNMT1-228ENST00000592705 ARPP21Q9UBL0 812 aaPredicted RBP14.11□□□□□ -0.15
DNMT1-228ENST00000592705 MKRN1Q9UHC7 482 aaKnown RBP14.11□□□□□ -0.15
DNMT1-228ENST00000592705 ADCY7P51828 1080 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 MORC3Q14149 939 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 UTP14CQ5TAP6 766 aaKnown RBP14.1□□□□□ -0.15
DNMT1-228ENST00000592705 ABCC3O15438 1527 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 USP17L3A6NCW0 530 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 USP17L4A6NCW7 530 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 CFBP00751 764 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 GSTA5Q7RTV2 222 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 USP17L1Q7RTZ2 530 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 SNX29Q8TEQ0 813 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 STAMQ92783 540 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 PAIP2Q9BPZ3 127 aaKnown RBP14.1□□□□□ -0.15
DNMT1-228ENST00000592705 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.1□□□□□ -0.15
DNMT1-228ENST00000592705 TLDC2A0PJX2 215 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 USP17L8P0C7I0 530 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms