RNA–Protein interactions for RNA: ENST00000592628.5

TCF3-217, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-217ENST00000592628 SUPT20HL1Q3ZLR7 823 aa18.12■□□□□ 0.49
TCF3-217ENST00000592628 FAM173BQ6P4H8 233 aa18.12■□□□□ 0.49
TCF3-217ENST00000592628 CCDC84Q86UT8 332 aaPredicted RBP18.12■□□□□ 0.49
TCF3-217ENST00000592628 GMCL1P1Q8NEA9 526 aa18.12■□□□□ 0.49
TCF3-217ENST00000592628 SPZ1Q9BXG8 430 aa18.12■□□□□ 0.49
TCF3-217ENST00000592628 ZSCAN16Q9H4T2 348 aaPredicted RBP18.12■□□□□ 0.49
TCF3-217ENST00000592628 VEGFAP15692 232 aaPredicted RBP18.12■□□□□ 0.49
TCF3-217ENST00000592628 SMARCA1P28370 1054 aa18.12■□□□□ 0.49
TCF3-217ENST00000592628 PFKFB3Q16875 520 aaPredicted RBP18.12■□□□□ 0.49
TCF3-217ENST00000592628 EAPPQ56P03 285 aaPredicted RBP18.12■□□□□ 0.49
TCF3-217ENST00000592628 KCTD1Q719H9 257 aa18.12■□□□□ 0.49
TCF3-217ENST00000592628 KRT26Q7Z3Y9 468 aa18.12■□□□□ 0.49
TCF3-217ENST00000592628 DCAF4Q8WV16 495 aa18.12■□□□□ 0.49
TCF3-217ENST00000592628 SHISA4Q96DD7 197 aa18.12■□□□□ 0.49
TCF3-217ENST00000592628 SYNPO2Q9UMS6 1093 aa18.12■□□□□ 0.49
TCF3-217ENST00000592628 TMX2Q9Y320 296 aa18.12■□□□□ 0.49
TCF3-217ENST00000592628 NDUFB10O96000 172 aa18.11■□□□□ 0.49
TCF3-217ENST00000592628 SCG2P13521 617 aa18.11■□□□□ 0.49
TCF3-217ENST00000592628 SLC1A4P43007 532 aa18.11■□□□□ 0.49
TCF3-217ENST00000592628 CCDC96Q2M329 555 aa18.11■□□□□ 0.49
TCF3-217ENST00000592628 GPATCH4Q5T3I0 446 aaKnown RBP18.11■□□□□ 0.49
TCF3-217ENST00000592628 TTBK2Q6IQ55 1244 aa18.11■□□□□ 0.49
TCF3-217ENST00000592628 RIOX1Q9H6W3 641 aa18.11■□□□□ 0.49
TCF3-217ENST00000592628 VAT1LQ9HCJ6 419 aa18.11■□□□□ 0.49
TCF3-217ENST00000592628 GINM1Q9NU53 330 aa18.11■□□□□ 0.49
TCF3-217ENST00000592628 VPS54Q9P1Q0 977 aa18.11■□□□□ 0.49
TCF3-217ENST00000592628 RBM27Q9P2N5 1060 aaKnown RBP18.11■□□□□ 0.49
TCF3-217ENST00000592628 KCNJ14Q9UNX9 436 aa18.11■□□□□ 0.49
TCF3-217ENST00000592628 MYH15Q9Y2K3 1946 aa18.1■□□□□ 0.49
TCF3-217ENST00000592628 DOCK1Q14185 1865 aa18.1■□□□□ 0.49
TCF3-217ENST00000592628 DNM1Q05193 864 aaKnown RBP18.1■□□□□ 0.49
TCF3-217ENST00000592628 KLRG1Q96E93 195 aa18.1■□□□□ 0.49
TCF3-217ENST00000592628 WRNIP1Q96S55 665 aa18.1■□□□□ 0.49
TCF3-217ENST00000592628 GLIS2Q9BZE0 524 aaPredicted RBP18.1■□□□□ 0.49
TCF3-217ENST00000592628 KIF28PB7ZC32 967 aa18.09■□□□□ 0.49
TCF3-217ENST00000592628 KIF23Q02241 960 aaPredicted RBP18.09■□□□□ 0.49
TCF3-217ENST00000592628 USP48Q86UV5 1035 aa18.09■□□□□ 0.49
TCF3-217ENST00000592628 ZKSCAN4Q969J2 545 aaPredicted RBP18.09■□□□□ 0.49
TCF3-217ENST00000592628 GMCL1Q96IK5 515 aa18.09■□□□□ 0.49
TCF3-217ENST00000592628 USP2O75604 605 aaPredicted RBP18.09■□□□□ 0.49
TCF3-217ENST00000592628 MMP1P03956 469 aa18.09■□□□□ 0.49
TCF3-217ENST00000592628 XBP1P17861 261 aa18.09■□□□□ 0.49
TCF3-217ENST00000592628 PRKG1Q13976 671 aa18.09■□□□□ 0.49
TCF3-217ENST00000592628 KIAA1755Q5JYT7 1200 aa18.09■□□□□ 0.49
TCF3-217ENST00000592628 PNMA8AQ86V59 439 aaPredicted RBP18.09■□□□□ 0.49
TCF3-217ENST00000592628 NUP88Q99567 741 aaPredicted RBP18.09■□□□□ 0.49
TCF3-217ENST00000592628 CNPY2Q9Y2B0 182 aa18.09■□□□□ 0.49
TCF3-217ENST00000592628 DDX11L8A8MPP1 907 aa18.08■□□□□ 0.48
TCF3-217ENST00000592628 SLC16A2P36021 539 aa18.08■□□□□ 0.48
TCF3-217ENST00000592628 SCYL3Q8IZE3 742 aa18.08■□□□□ 0.48
TCF3-217ENST00000592628 ADGRF4Q8IZF3 695 aa18.08■□□□□ 0.48
TCF3-217ENST00000592628 SPICE1Q8N0Z3 855 aa18.08■□□□□ 0.48
TCF3-217ENST00000592628 RRP36Q96EU6 259 aaKnown RBP18.08■□□□□ 0.48
TCF3-217ENST00000592628 PIGSQ96S52 555 aa18.08■□□□□ 0.48
TCF3-217ENST00000592628 GOPCQ9HD26 462 aa18.08■□□□□ 0.48
TCF3-217ENST00000592628 ISY1Q9ULR0 285 aaKnown RBP18.08■□□□□ 0.48
TCF3-217ENST00000592628 GOLGA6L22H0YM25 854 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 BMP3P12645 472 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 ZYXQ15942 572 aaKnown RBP18.07■□□□□ 0.48
TCF3-217ENST00000592628 HOMER1Q86YM7 354 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 GPKOWQ92917 476 aaPredicted RBP eCLIP18.07■□□□□ 0.48
TCF3-217ENST00000592628 PHF20Q9BVI0 1012 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 SH2D4AQ9H788 454 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 VCPKMTQ9H867 229 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 JMJD4Q9H9V9 463 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 GDPD2Q9HCC8 539 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 POTEIP0CG38 1075 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 POTEJP0CG39 1038 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 NCLP19338 710 aaKnown RBP18.07■□□□□ 0.48
TCF3-217ENST00000592628 DIS3L2Q8IYB7 885 aaKnown RBP18.07■□□□□ 0.48
TCF3-217ENST00000592628 CDCA5Q96FF9 252 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 RRAGCQ9HB90 399 aa18.07■□□□□ 0.48
TCF3-217ENST00000592628 DCAF8L1A6NGE4 600 aa18.06■□□□□ 0.48
TCF3-217ENST00000592628 BTBD18B2RXH4 712 aa18.06■□□□□ 0.48
TCF3-217ENST00000592628 U2AF2P26368 475 aaKnown RBP eCLIP18.06■□□□□ 0.48
TCF3-217ENST00000592628 SAFBQ15424 915 aaKnown RBP eCLIP18.06■□□□□ 0.48
TCF3-217ENST00000592628 WWC2Q6AWC2 1192 aa18.06■□□□□ 0.48
TCF3-217ENST00000592628 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.06■□□□□ 0.484e-7■■■□□ 18.8
TCF3-217ENST00000592628 LMBRD1Q9NUN5 540 aa18.06■□□□□ 0.48
TCF3-217ENST00000592628 TFIP11Q9UBB9 837 aaKnown RBP18.06■□□□□ 0.48
TCF3-217ENST00000592628 SEC63Q9UGP8 760 aaKnown RBP18.06■□□□□ 0.48
TCF3-217ENST00000592628 CLEC11AQ9Y240 323 aa18.06■□□□□ 0.48
TCF3-217ENST00000592628 PRPF40AO75400 957 aaKnown RBP18.05■□□□□ 0.48
TCF3-217ENST00000592628 PTPRAP18433 802 aa18.05■□□□□ 0.48
TCF3-217ENST00000592628 KRT85P78386 507 aa18.05■□□□□ 0.48
TCF3-217ENST00000592628 GNL2Q13823 731 aaKnown RBP18.05■□□□□ 0.48
TCF3-217ENST00000592628 TYW1BQ6NUM6 668 aa18.05■□□□□ 0.48
TCF3-217ENST00000592628 HEATR3Q7Z4Q2 680 aa18.05■□□□□ 0.48
TCF3-217ENST00000592628 BRAPQ7Z569 592 aa18.05■□□□□ 0.48
TCF3-217ENST00000592628 OXER1Q8TDS5 423 aa18.05■□□□□ 0.48
TCF3-217ENST00000592628 SH3GLB2Q9NR46 395 aa18.05■□□□□ 0.48
TCF3-217ENST00000592628 PICK1Q9NRD5 415 aa18.05■□□□□ 0.48
TCF3-217ENST00000592628 BARHL2Q9NY43 387 aa18.05■□□□□ 0.48
TCF3-217ENST00000592628 PHIPQ8WWQ0 1821 aa18.05■□□□□ 0.48
TCF3-217ENST00000592628 USP17L10C9JJH3 530 aa18.04■□□□□ 0.48
TCF3-217ENST00000592628 TMEM232C9JQI7 657 aa18.04■□□□□ 0.48
TCF3-217ENST00000592628 STXBP3O00186 592 aa18.04■□□□□ 0.48
TCF3-217ENST00000592628 PPP1R12BO60237 982 aaPredicted RBP18.04■□□□□ 0.48
TCF3-217ENST00000592628 NLRP5P59047 1200 aa18.04■□□□□ 0.48
TCF3-217ENST00000592628 NPY5RQ15761 445 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms