RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 RGS3P49796 1198 aa11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 BACE1P56817 501 aa11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 ERVK-21P61565 698 aa11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 COL19A1Q14993 1142 aa11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 TCEAL5Q5H9L2 206 aa11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 CCSAPQ6IQ19 270 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 CRACR2BQ8N4Y2 399 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 DCLK2Q8N568 766 aa11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 TGS1Q96RS0 853 aaKnown RBP11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 NOC4LQ9BVI4 516 aaKnown RBP11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 OSBPL5Q9H0X9 879 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 SEMA4AQ9H3S1 761 aa11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 AS3MTQ9HBK9 375 aa11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 USP9XQ93008 2570 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 TNKSO95271 1327 aa11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 ZNF236Q9UL36 1845 aa11.23□□□□□ -0.61
SMARCA4-218ENST00000592158 NBEAQ8NFP9 2946 aa11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 COBLO75128 1261 aa11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 FRAT2O75474 233 aaPredicted RBP11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 PTPRSQ13332 1948 aa11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 RALGAPA2Q2PPJ7 1873 aa11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 TIGD5Q53EQ6 642 aa11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 DEFB128Q7Z7B8 93 aa11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 RPAINQ86UA6 219 aa11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 BANK1Q8NDB2 785 aa11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 MRPL38Q96DV4 380 aaKnown RBP11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 CTNNA3Q9UI47 895 aa11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 SYNRGQ9UMZ2 1314 aa11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 SUGT1Q9Y2Z0 365 aa11.22□□□□□ -0.61
SMARCA4-218ENST00000592158 ANKRD18BA2A2Z9 1011 aa11.21□□□□□ -0.61
SMARCA4-218ENST00000592158 FAM196BA6NMK8 535 aa11.21□□□□□ -0.61
SMARCA4-218ENST00000592158 LOC730098B7Z3J9 87 aa11.21□□□□□ -0.61
SMARCA4-218ENST00000592158 ENTPD3O75355 529 aa11.21□□□□□ -0.61
SMARCA4-218ENST00000592158 PPP2R1AP30153 589 aa11.21□□□□□ -0.61
SMARCA4-218ENST00000592158 SMAD4Q13485 552 aaKnown RBP11.21□□□□□ -0.61
SMARCA4-218ENST00000592158 RUBCNQ92622 972 aa11.21□□□□□ -0.61
SMARCA4-218ENST00000592158 HAUS7Q99871 368 aa11.21□□□□□ -0.61
SMARCA4-218ENST00000592158 METTL22Q9BUU2 404 aaPredicted RBP11.21□□□□□ -0.61
SMARCA4-218ENST00000592158 NRBP1Q9UHY1 535 aa11.21□□□□□ -0.61
SMARCA4-218ENST00000592158 COL11A1P12107 1806 aaPredicted RBP11.21□□□□□ -0.62
SMARCA4-218ENST00000592158 MYADML2A6NDP7 307 aa11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 ASGR1P07306 291 aa11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 AKR1A1P14550 325 aa11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 TAL1P17542 331 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 DLX2Q07687 328 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 CBX2Q14781 532 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 PTPROQ16827 1216 aa11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 LRSAM1Q6UWE0 723 aa11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 CYP2W1Q8TAV3 490 aa11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 MAML3Q96JK9 1138 aa11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 WDR18Q9BV38 432 aa11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 SLC5A4Q9NY91 659 aa11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 BTBD7Q9P203 1132 aa11.2□□□□□ -0.62
SMARCA4-218ENST00000592158 CDK5RAP2Q96SN8 1893 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 ROBO3Q96MS0 1386 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 STRNO43815 780 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 NEFMP07197 916 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 CSF1RP07333 972 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 CAP2P40123 477 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 IRX5P78411 483 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 UBE4AQ14139 1066 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 DIXDC1Q155Q3 683 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 VPS37DQ86XT2 251 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 CRIPAKQ8N1N5 446 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 AGBL1Q96MI9 1066 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 PHAXQ9H814 394 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 BABAM1Q9NWV8 329 aa11.19□□□□□ -0.62
SMARCA4-218ENST00000592158 ZNFX1Q9P2E3 1918 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-218ENST00000592158 C19orf81C9J6K1 198 aa11.18□□□□□ -0.62
SMARCA4-218ENST00000592158 TBC1D12O60347 775 aa11.18□□□□□ -0.62
SMARCA4-218ENST00000592158 RRP1BQ14684 758 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-218ENST00000592158 UBE3BQ7Z3V4 1068 aa11.18□□□□□ -0.62
SMARCA4-218ENST00000592158 PCSK9Q8NBP7 692 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-218ENST00000592158 FBXO22Q8NEZ5 403 aa11.18□□□□□ -0.62
SMARCA4-218ENST00000592158 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
SMARCA4-218ENST00000592158 IDI2Q9BXS1 227 aa11.18□□□□□ -0.62
SMARCA4-218ENST00000592158 CDV3Q9UKY7 258 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-218ENST00000592158 CEP295Q9C0D2 2601 aa11.18□□□□□ -0.62
SMARCA4-218ENST00000592158 LINC01553A4QN01 128 aa11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 IGKV5-2P06315 115 aa11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 PROS1P07225 676 aa11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 ZNF865P0CJ78 1059 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 ANGPT1Q15389 498 aa11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 PTPN21Q16825 1174 aa11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 ASTLQ6HA08 431 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 FBXO33Q7Z6M2 555 aa11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 TMCO2Q7Z6W1 182 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 RTKNQ9BST9 563 aa11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 PLA2G12BQ9BX93 195 aa11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 NSUN3Q9H649 340 aaKnown RBP11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 ANGPTL2Q9UKU9 493 aa11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 ZMIZ1Q9ULJ6 1067 aa11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 TET1Q8NFU7 2136 aa11.17□□□□□ -0.62
SMARCA4-218ENST00000592158 USP17L10C9JJH3 530 aa11.16□□□□□ -0.62
SMARCA4-218ENST00000592158 NCK2O43639 380 aa11.16□□□□□ -0.62
SMARCA4-218ENST00000592158 C6orf222P0C671 652 aaPredicted RBP11.16□□□□□ -0.62
SMARCA4-218ENST00000592158 CST5P28325 142 aaPredicted RBP11.16□□□□□ -0.62
SMARCA4-218ENST00000592158 ICAM3P32942 547 aa11.16□□□□□ -0.62
SMARCA4-218ENST00000592158 CTC1Q2NKJ3 1217 aa11.16□□□□□ -0.62
SMARCA4-218ENST00000592158 PRR23BQ6ZRT6 265 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms