RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 TMX2Q9Y320 296 aa12.16□□□□□ -0.46
VMP1-214ENST00000592106 BAZ2AQ9UIF9 1905 aaKnown RBP12.15□□□□□ -0.46
VMP1-214ENST00000592106 SLC25A27O95847 323 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 ZFYP08048 801 aaPredicted RBP12.15□□□□□ -0.46
VMP1-214ENST00000592106 ADORA2AP29274 412 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 COPB2P35606 906 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 OLFML2BQ68BL8 750 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 GIMAP6Q6P9H5 292 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 POTEEQ6S8J3 1075 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 NCAPG2Q86XI2 1143 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 ABRAQ8N0Z2 381 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 KBTBD3Q8NAB2 608 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 APPBP2Q92624 585 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 ZNF287Q9HBT7 754 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 BMP2KQ9NSY1 1161 aaPredicted RBP12.15□□□□□ -0.46
VMP1-214ENST00000592106 STAP2Q9UGK3 403 aa12.15□□□□□ -0.46
VMP1-214ENST00000592106 DDX20Q9UHI6 824 aaKnown RBP12.15□□□□□ -0.46
VMP1-214ENST00000592106 ZMYND8Q9ULU4 1186 aaPredicted RBP12.15□□□□□ -0.46
VMP1-214ENST00000592106 PFASO15067 1338 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 FRMPD3Q5JV73 1810 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 TTLL13PA6NNM8 815 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 RAD21O60216 631 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 SMARCA5O60264 1052 aaPredicted RBP12.14□□□□□ -0.47
VMP1-214ENST00000592106 GNAT2P19087 354 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 ERCC3P19447 782 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 BMP8BP34820 402 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 C20orf194Q5TEA3 1177 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 LHX8Q68G74 356 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 SPICE1Q8N0Z3 855 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 NPLOC4Q8TAT6 608 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 ATG4CQ96DT6 458 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 PUS7LQ9H0K6 701 aaKnown RBP12.14□□□□□ -0.47
VMP1-214ENST00000592106 MKNK2Q9HBH9 465 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 FLRT1Q9NZU1 646 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 TRPC6Q9Y210 931 aa12.14□□□□□ -0.47
VMP1-214ENST00000592106 CYP2D7A0A087X1C5 515 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 KBTBD13C9JR72 458 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 DNM1LO00429 736 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 ERC2O15083 957 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
VMP1-214ENST00000592106 COL6A1P12109 1028 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 FCER1AP12319 257 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 CYBAP13498 195 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 EEF2P13639 858 aaKnown RBP12.13□□□□□ -0.47
VMP1-214ENST00000592106 SYN1P17600 705 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 CYP2C19P33261 490 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 TDO2P48775 406 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 SLFNL1Q499Z3 407 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 SBK1Q52WX2 424 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 CTR9Q6PD62 1173 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 CLEC10AQ8IUN9 316 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 GDF15Q99988 308 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 DCTPP1Q9H773 170 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 ROBO3Q96MS0 1386 aa12.13□□□□□ -0.47
VMP1-214ENST00000592106 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.12□□□□□ -0.47
VMP1-214ENST00000592106 RNF113AO15541 343 aaKnown RBP12.12□□□□□ -0.47
VMP1-214ENST00000592106 KCTD2Q14681 263 aa12.12□□□□□ -0.47
VMP1-214ENST00000592106 ARRDC4Q8NCT1 418 aa12.12□□□□□ -0.47
VMP1-214ENST00000592106 ZFP91Q96JP5 570 aaPredicted RBP12.12□□□□□ -0.47
VMP1-214ENST00000592106 STRBPQ96SI9 672 aaKnown RBP12.12□□□□□ -0.47
VMP1-214ENST00000592106 MMP19Q99542 508 aa12.12□□□□□ -0.47
VMP1-214ENST00000592106 NACAP1Q9BZK3 213 aa12.12□□□□□ -0.47
VMP1-214ENST00000592106 UBE2OQ9C0C9 1292 aaKnown RBP12.12□□□□□ -0.47
VMP1-214ENST00000592106 PRKAG2Q9UGJ0 569 aa12.12□□□□□ -0.47
VMP1-214ENST00000592106 CTDP1Q9Y5B0 961 aaPredicted RBP12.12□□□□□ -0.47
VMP1-214ENST00000592106 TTC41PQ6P2S7 1318 aa12.11□□□□□ -0.47
VMP1-214ENST00000592106 MINDY4BA8MYZ0 360 aa12.11□□□□□ -0.47
VMP1-214ENST00000592106 SEPT4O43236 478 aa12.11□□□□□ -0.47
VMP1-214ENST00000592106 GPAA1O43292 621 aa12.11□□□□□ -0.47
VMP1-214ENST00000592106 MAGEA10P43363 369 aaPredicted RBP12.11□□□□□ -0.47
VMP1-214ENST00000592106 LRRC26Q2I0M4 334 aa12.11□□□□□ -0.47
VMP1-214ENST00000592106 RIOX2Q8IUF8 465 aa12.11□□□□□ -0.47
VMP1-214ENST00000592106 LBHD1Q9BQE6 289 aaPredicted RBP12.11□□□□□ -0.47
VMP1-214ENST00000592106 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
VMP1-214ENST00000592106 NRBP1Q9UHY1 535 aa12.11□□□□□ -0.47
VMP1-214ENST00000592106 PPP1R9AQ9ULJ8 1098 aa12.11□□□□□ -0.47
VMP1-214ENST00000592106 RLFQ13129 1914 aa12.1□□□□□ -0.47
VMP1-214ENST00000592106 PARP14Q460N5 1801 aa12.1□□□□□ -0.47
VMP1-214ENST00000592106 GSG1L2A8MUP6 293 aa12.1□□□□□ -0.47
VMP1-214ENST00000592106 APPP05067 770 aa12.1□□□□□ -0.47
VMP1-214ENST00000592106 SLC3A2P08195 630 aaKnown RBP12.1□□□□□ -0.47
VMP1-214ENST00000592106 KIAA1755Q5JYT7 1200 aa12.1□□□□□ -0.47
VMP1-214ENST00000592106 FAM83BQ5T0W9 1011 aa12.1□□□□□ -0.47
VMP1-214ENST00000592106 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
VMP1-214ENST00000592106 SIAH1Q8IUQ4 282 aa12.1□□□□□ -0.47
VMP1-214ENST00000592106 TDHQ8IZJ6 230 aa12.1□□□□□ -0.47
VMP1-214ENST00000592106 ZNF444Q8N0Y2 327 aaPredicted RBP12.1□□□□□ -0.47
VMP1-214ENST00000592106 MAML3Q96JK9 1138 aa12.1□□□□□ -0.47
VMP1-214ENST00000592106 NYAP2Q9P242 653 aa12.1□□□□□ -0.47
VMP1-214ENST00000592106 VWA5AO00534 786 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 CHGBP05060 677 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 RASA1P20936 1047 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 STAT3P40763 770 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 PDE4BQ07343 736 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 TMEM132BQ14DG7 1078 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 LRIT3Q3SXY7 679 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 PPP4R3BQ5MIZ7 849 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 OSBP2Q969R2 916 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 SLF1Q9BQI6 1058 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 FSD1Q9BTV5 496 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms