RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 RNF114Q9Y508 228 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 ARHGEF10O15013 1369 aa6.82□□□□□ -1.32
NPC1-213ENST00000591955 ABCA3Q99758 1704 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 C1orf167Q5SNV9 1468 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 PES1O00541 588 aaKnown RBP6.81□□□□□ -1.32
NPC1-213ENST00000591955 C21orf2O43822 256 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 SMC2O95347 1197 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 MAP3K6O95382 1288 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 ZNF165P49910 485 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 GP2P55259 537 aaKnown RBP6.81□□□□□ -1.32
NPC1-213ENST00000591955 ETF1P62495 437 aaKnown RBP6.81□□□□□ -1.32
NPC1-213ENST00000591955 IRX1P78414 480 aaPredicted RBP6.81□□□□□ -1.32
NPC1-213ENST00000591955 DNAJC21Q5F1R6 531 aaKnown RBP6.81□□□□□ -1.32
NPC1-213ENST00000591955 IER5Q5VY09 327 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 C10orf67Q8IYJ2 551 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 CEP57L1Q8IYX8 460 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 ALDH16A1Q8IZ83 802 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 TMEM130Q8N3G9 435 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 SPC24Q8NBT2 197 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 FAM71BQ8TC56 605 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 LRRC59Q96AG4 307 aaKnown RBP6.81□□□□□ -1.32
NPC1-213ENST00000591955 BPIFA3Q9BQP9 254 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 TM6SF1Q9BZW5 370 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 ANO10Q9NW15 660 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 ORC3Q9UBD5 711 aaPredicted RBP6.81□□□□□ -1.32
NPC1-213ENST00000591955 AMOTL2Q9Y2J4 779 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 TBX22Q9Y458 520 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 MRVI1Q9Y6F6 885 aa6.81□□□□□ -1.32
NPC1-213ENST00000591955 USP17L5A8MUK1 530 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 BECN2A8MW95 431 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 ZBTB42B2RXF5 422 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 M0R2N6 131 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 SRGAP3O43295 1099 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 CBFA2T2O43439 604 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 PPFIA4O75335 1185 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 SFPQP23246 707 aaKnown RBP eCLIP6.8□□□□□ -1.32
NPC1-213ENST00000591955 OAS2P29728 719 aaKnown RBP6.8□□□□□ -1.32
NPC1-213ENST00000591955 HSPA4P34932 840 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 MTHFSP49914 203 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 CCDC102BQ68D86 513 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 HDXQ7Z353 690 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 TADA2BQ86TJ2 420 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 TRIM50Q86XT4 487 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 CCDC50Q8IVM0 306 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 DEPDC4Q8N2C3 294 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 C17orf53Q8N3J3 647 aaPredicted RBP6.8□□□□□ -1.32
NPC1-213ENST00000591955 TRPM4Q8TD43 1214 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 RUFY2Q8WXA3 655 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 GOLGA1Q92805 767 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 PLEKHF1Q96S99 279 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 ALG2Q9H553 416 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 CBX8Q9HC52 389 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 CFAP45Q9UL16 551 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 TNNQ9UQP3 1299 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 METP08581 1390 aa6.8□□□□□ -1.32
NPC1-213ENST00000591955 COL3A1P02461 1466 aaPredicted RBP6.79□□□□□ -1.32
NPC1-213ENST00000591955 PXDNQ92626 1479 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 SOS1Q07889 1333 aaPredicted RBP6.79□□□□□ -1.32
NPC1-213ENST00000591955 RPGRIP1LQ68CZ1 1315 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 EVC2Q86UK5 1308 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 RGPD1P0DJD0 1748 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 ANKRD26Q9UPS8 1709 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 CCDC69A6NI79 296 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 EIF3CLB5ME19 914 aaKnown RBP6.79□□□□□ -1.32
NPC1-213ENST00000591955 F8W735 103 aaPredicted RBP6.79□□□□□ -1.32
NPC1-213ENST00000591955 GADD45BO75293 160 aaPredicted RBP6.79□□□□□ -1.32
NPC1-213ENST00000591955 TADA3O75528 432 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 ALX3O95076 343 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 YY1P25490 414 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 GRNP28799 593 aaKnown RBP6.79□□□□□ -1.32
NPC1-213ENST00000591955 MAP9Q49MG5 647 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 GORABQ5T7V8 394 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 VPS53Q5VIR6 699 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 CC2D1AQ6P1N0 951 aaPredicted RBP6.79□□□□□ -1.32
NPC1-213ENST00000591955 GIMAP6Q6P9H5 292 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 ELMSAN1Q6PJG2 1045 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 Q6ZS46 218 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 STAG2Q8N3U4 1231 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 FNBP4Q8N3X1 1017 aaPredicted RBP6.79□□□□□ -1.32
NPC1-213ENST00000591955 CEP112Q8N8E3 955 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.79□□□□□ -1.32
NPC1-213ENST00000591955 ORAI2Q96SN7 254 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 PSMD1Q99460 953 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 EIF3CQ99613 913 aaKnown RBP6.79□□□□□ -1.32
NPC1-213ENST00000591955 ZSCAN16Q9H4T2 348 aaPredicted RBP6.79□□□□□ -1.32
NPC1-213ENST00000591955 VIPAS39Q9H9C1 493 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 ZNF446Q9NWS9 450 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 STAP2Q9UGK3 403 aa6.79□□□□□ -1.32
NPC1-213ENST00000591955 DMGDHQ9UI17 866 aaKnown RBP6.79□□□□□ -1.32
NPC1-213ENST00000591955 TTC21AQ8NDW8 1320 aa6.78□□□□□ -1.32
NPC1-213ENST00000591955 YTHDC2Q9H6S0 1430 aaKnown RBP6.78□□□□□ -1.32
NPC1-213ENST00000591955 ATP10DQ9P241 1426 aa6.78□□□□□ -1.32
NPC1-213ENST00000591955 LOC102724159A0A0B4J2E5 919 aa6.78□□□□□ -1.32
NPC1-213ENST00000591955 FAM177BA6PVY3 158 aa6.78□□□□□ -1.32
NPC1-213ENST00000591955 FIBPO43427 364 aa6.78□□□□□ -1.32
NPC1-213ENST00000591955 PPP1R12BO60237 982 aaPredicted RBP6.78□□□□□ -1.32
NPC1-213ENST00000591955 SYT1P21579 422 aa6.78□□□□□ -1.32
NPC1-213ENST00000591955 PSMA5P28066 241 aa6.78□□□□□ -1.32
NPC1-213ENST00000591955 RDXP35241 583 aaKnown RBP6.78□□□□□ -1.32
NPC1-213ENST00000591955 USP5P45974 858 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms