RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SYNPO2Q9UMS6 1093 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 GABRQQ9UN88 632 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 DDX60LQ5H9U9 1706 aaKnown RBP11.89□□□□□ -0.51
BRCA1-227ENST00000591849 ATAD5Q96QE3 1844 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 ZBED4O75132 1171 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 SLC1A4P43007 532 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 TRDNQ13061 729 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 CCDC178Q5BJE1 867 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 LBX2Q6XYB7 198 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 SKAP1Q86WV1 359 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 SLAIN1Q8ND83 568 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 ATG4CQ96DT6 458 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 BTBD7Q9P203 1132 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 U3KPZ7 1027 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-227ENST00000591849 PHIPQ8WWQ0 1821 aa11.88□□□□□ -0.51
BRCA1-227ENST00000591849 SGSM2O43147 1006 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 NMT2O60551 498 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 FGRP09769 529 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 BMP3P12645 472 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 CYP2B6P20813 491 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 MCCP23508 829 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 CCDC96Q2M329 555 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 BMP2KLQ5H9B9 411 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 GPR142Q7Z601 462 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 IQCA1Q86XH1 822 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 NCAPG2Q86XI2 1143 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 GMCL1P1Q8NEA9 526 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 CHURC1Q8WUH1 139 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 SOCS4Q8WXH5 440 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 KIFC2Q96AC6 838 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 ARMC5Q96C12 935 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 SLF1Q9BQI6 1058 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 KRT23Q9C075 422 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 PORCNQ9H237 461 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 CNNM2Q9H8M5 875 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 FBXO28Q9NVF7 368 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 FEM1BQ9UK73 627 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 PPP1R9AQ9ULJ8 1098 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
BRCA1-227ENST00000591849 TMEM232C9JQI7 657 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 KDM4AO75164 1064 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 CNMDO75829 334 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 TOP1P11387 765 aaKnown RBP11.86□□□□□ -0.51
BRCA1-227ENST00000591849 ELNP15502 786 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 RGS2P41220 211 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 NT5C2P49902 561 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 PTH1RQ03431 593 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 IRF5Q13568 498 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 PRPF38AQ8NAV1 312 aaKnown RBP11.86□□□□□ -0.51
BRCA1-227ENST00000591849 SPATC1LQ9H0A9 340 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 IL17RBQ9NRM6 502 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 TCP11L1Q9NUJ3 509 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 PLIN4Q96Q06 1357 aa11.86□□□□□ -0.51
BRCA1-227ENST00000591849 B4E1Z4 1266 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 SLC25A27O95847 323 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 ERCC3P19447 782 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 STAT3P40763 770 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 RCSD1Q6JBY9 416 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 RALYLQ86SE5 291 aaKnown RBP11.85□□□□□ -0.51
BRCA1-227ENST00000591849 DPP9Q86TI2 863 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 FAM160B2Q86V87 743 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 TRMT44Q8IYL2 757 aaKnown RBP11.85□□□□□ -0.51
BRCA1-227ENST00000591849 CPXCR1Q8N123 301 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 PXYLP1Q8TE99 480 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 ZNF333Q96JL9 665 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 TTC14Q96N46 770 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 ZKSCAN3Q9BRR0 538 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 ESYT1Q9BSJ8 1104 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 UBAC1Q9BSL1 405 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 MOV10L1Q9BXT6 1211 aaKnown RBP11.85□□□□□ -0.51
BRCA1-227ENST00000591849 IL25Q9H293 177 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 MROH8Q9H579 483 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 ANO2Q9NQ90 1003 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 SLC5A4Q9NY91 659 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 GJD2Q9UKL4 321 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 NEDD4P46934 1319 aa11.85□□□□□ -0.51
BRCA1-227ENST00000591849 LOC285556D6RIA3 1793 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 SLC15A5A6NIM6 579 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 VWA5AO00534 786 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 STRNO43815 780 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 CDC45O75419 566 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 ZKSCAN1P17029 563 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-227ENST00000591849 PTPREP23469 700 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 COPB2P35606 906 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 STAT2P52630 851 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 MAP2K5Q13163 448 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 TMEM132BQ14DG7 1078 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 POTEEQ6S8J3 1075 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 KCTD1Q719H9 257 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 SHCBP1Q8NEM2 672 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 DCAF4Q8WV16 495 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 GMCL1Q96IK5 515 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 TMEM47Q9BQJ4 181 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 RNF208Q9H0X6 261 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 KAT14Q9H8E8 782 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 GPCPD1Q9NPB8 672 aa11.84□□□□□ -0.51
BRCA1-227ENST00000591849 PTPRFP10586 1907 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms