RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 V9GY48 417 aaPredicted RBP22.41■■□□□ 1.18
SPHK1-207ENST00000590959 ELP1O95163 1332 aa22.41■■□□□ 1.18
SPHK1-207ENST00000590959 CNTNAP5Q8WYK1 1306 aa22.41■■□□□ 1.18
SPHK1-207ENST00000590959 MPHOSPH10O00566 681 aaKnown RBP22.41■■□□□ 1.18
SPHK1-207ENST00000590959 TTLL1O95922 423 aa22.41■■□□□ 1.18
SPHK1-207ENST00000590959 XBP1P17861 261 aa22.41■■□□□ 1.18
SPHK1-207ENST00000590959 CERKLQ49MI3 558 aaPredicted RBP22.41■■□□□ 1.18
SPHK1-207ENST00000590959 ZNF396Q96N95 335 aaPredicted RBP22.41■■□□□ 1.18
SPHK1-207ENST00000590959 DEFB129Q9H1M3 183 aa22.41■■□□□ 1.18
SPHK1-207ENST00000590959 MYH8P13535 1937 aa22.4■■□□□ 1.18
SPHK1-207ENST00000590959 SPATA32Q96LK8 384 aa22.4■■□□□ 1.18
SPHK1-207ENST00000590959 MAD2L2Q9UI95 211 aa22.4■■□□□ 1.18
SPHK1-207ENST00000590959 SIPA1L1O43166 1804 aa22.39■■□□□ 1.18
SPHK1-207ENST00000590959 FAM196BA6NMK8 535 aa22.39■■□□□ 1.18
SPHK1-207ENST00000590959 GADD45BO75293 160 aaPredicted RBP22.39■■□□□ 1.18
SPHK1-207ENST00000590959 SAFBQ15424 915 aaKnown RBP eCLIP22.39■■□□□ 1.18
SPHK1-207ENST00000590959 PKN1Q16512 942 aa22.39■■□□□ 1.18
SPHK1-207ENST00000590959 FAM83AQ86UY5 434 aa22.39■■□□□ 1.18
SPHK1-207ENST00000590959 PNMA8AQ86V59 439 aaPredicted RBP22.39■■□□□ 1.18
SPHK1-207ENST00000590959 LZTS2Q9BRK4 669 aa22.39■■□□□ 1.18
SPHK1-207ENST00000590959 HERC5Q9UII4 1024 aaKnown RBP22.39■■□□□ 1.18
SPHK1-207ENST00000590959 MTMR7Q9Y216 660 aa22.39■■□□□ 1.18
SPHK1-207ENST00000590959 PALM3A6NDB9 673 aaPredicted RBP22.39■■□□□ 1.17
SPHK1-207ENST00000590959 MMP1P03956 469 aa22.39■■□□□ 1.17
SPHK1-207ENST00000590959 PTMAP06454 111 aaKnown RBP22.39■■□□□ 1.17
SPHK1-207ENST00000590959 GNL2Q13823 731 aaKnown RBP22.39■■□□□ 1.17
SPHK1-207ENST00000590959 TEPSINQ96N21 525 aa22.39■■□□□ 1.17
SPHK1-207ENST00000590959 PARP1P09874 1014 aaKnown RBP22.38■■□□□ 1.17
SPHK1-207ENST00000590959 STAG2Q8N3U4 1231 aa22.38■■□□□ 1.17
SPHK1-207ENST00000590959 LEO1Q8WVC0 666 aaPredicted RBP22.38■■□□□ 1.17
SPHK1-207ENST00000590959 KIF28PB7ZC32 967 aa22.37■■□□□ 1.17
SPHK1-207ENST00000590959 ADM5C9JUS6 153 aa22.37■■□□□ 1.17
SPHK1-207ENST00000590959 DYNC1I1O14576 645 aa22.37■■□□□ 1.17
SPHK1-207ENST00000590959 SASS6Q6UVJ0 657 aa22.37■■□□□ 1.17
SPHK1-207ENST00000590959 ZC3H15Q8WU90 426 aaKnown RBP22.37■■□□□ 1.17
SPHK1-207ENST00000590959 DCPSQ96C86 337 aaKnown RBP22.37■■□□□ 1.17
SPHK1-207ENST00000590959 CLIP2Q9UDT6 1046 aa22.37■■□□□ 1.17
SPHK1-207ENST00000590959 CLEC11AQ9Y240 323 aa22.37■■□□□ 1.17
SPHK1-207ENST00000590959 PITPNM2Q9BZ72 1349 aa22.37■■□□□ 1.17
SPHK1-207ENST00000590959 TPM3P06753 285 aa22.37■■□□□ 1.17
SPHK1-207ENST00000590959 U2AF2P26368 475 aaKnown RBP eCLIP22.37■■□□□ 1.17
SPHK1-207ENST00000590959 MYSM1Q5VVJ2 828 aa22.37■■□□□ 1.17
SPHK1-207ENST00000590959 APOBEC3FQ8IUX4 373 aaKnown RBP22.37■■□□□ 1.17
SPHK1-207ENST00000590959 hCG_1642624A0A1W2PR95 340 aa22.36■■□□□ 1.17
SPHK1-207ENST00000590959 TNFAIP1Q13829 316 aa22.36■■□□□ 1.17
SPHK1-207ENST00000590959 MAP1SQ66K74 1059 aaPredicted RBP22.36■■□□□ 1.17
SPHK1-207ENST00000590959 TMEM179Q6ZVK1 233 aa22.36■■□□□ 1.17
SPHK1-207ENST00000590959 CLEC10AQ8IUN9 316 aa22.36■■□□□ 1.17
SPHK1-207ENST00000590959 USP28Q96RU2 1077 aa22.36■■□□□ 1.17
SPHK1-207ENST00000590959 KANSL2Q9H9L4 492 aa22.36■■□□□ 1.17
SPHK1-207ENST00000590959 KLRF2D3W0D1 207 aa22.35■■□□□ 1.17
SPHK1-207ENST00000590959 TNNI2P48788 182 aa22.35■■□□□ 1.17
SPHK1-207ENST00000590959 PFKFB3Q16875 520 aaPredicted RBP22.35■■□□□ 1.17
SPHK1-207ENST00000590959 NBPF12Q5TAG4 269 aaPredicted RBP22.35■■□□□ 1.17
SPHK1-207ENST00000590959 KRT26Q7Z3Y9 468 aa22.35■■□□□ 1.17
SPHK1-207ENST00000590959 DIS3L2Q8IYB7 885 aaKnown RBP22.35■■□□□ 1.17
SPHK1-207ENST00000590959 LRRC47Q8N1G4 583 aaKnown RBP22.35■■□□□ 1.17
SPHK1-207ENST00000590959 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.35■■□□□ 1.17
SPHK1-207ENST00000590959 GPBP1L1Q9HC44 474 aaPredicted RBP22.35■■□□□ 1.17
SPHK1-207ENST00000590959 KCNJ14Q9UNX9 436 aa22.35■■□□□ 1.17
SPHK1-207ENST00000590959 R3HCC1Q9Y3T6 440 aaKnown RBP22.35■■□□□ 1.17
SPHK1-207ENST00000590959 PDHBP11177 359 aa22.34■■□□□ 1.17
SPHK1-207ENST00000590959 SCG2P13521 617 aa22.34■■□□□ 1.17
SPHK1-207ENST00000590959 ABCB5Q2M3G0 1257 aa22.34■■□□□ 1.17
SPHK1-207ENST00000590959 USP17L2Q6R6M4 530 aa22.34■■□□□ 1.17
SPHK1-207ENST00000590959 GLIS2Q9BZE0 524 aaPredicted RBP22.34■■□□□ 1.17
SPHK1-207ENST00000590959 FOXP1Q9H334 677 aaPredicted RBP22.34■■□□□ 1.17
SPHK1-207ENST00000590959 VPS54Q9P1Q0 977 aa22.34■■□□□ 1.17
SPHK1-207ENST00000590959 GREB1LQ9C091 1923 aaPredicted RBP22.34■■□□□ 1.17
SPHK1-207ENST00000590959 GOLGA8HP0CJ92 632 aa22.34■■□□□ 1.17
SPHK1-207ENST00000590959 CEBPZQ03701 1054 aaKnown RBP22.34■■□□□ 1.17
SPHK1-207ENST00000590959 FMR1Q06787 632 aaKnown RBP eCLIP22.34■■□□□ 1.17
SPHK1-207ENST00000590959 MIGA2Q7L4E1 593 aa22.34■■□□□ 1.17
SPHK1-207ENST00000590959 RNF214Q8ND24 703 aa22.34■■□□□ 1.17
SPHK1-207ENST00000590959 NYAP2Q9P242 653 aa22.34■■□□□ 1.17
SPHK1-207ENST00000590959 RCOR1Q9UKL0 485 aa22.34■■□□□ 1.17
SPHK1-207ENST00000590959 GOLGA6L4A6NEF3 574 aa22.33■■□□□ 1.17
SPHK1-207ENST00000590959 SMARCA1P28370 1054 aa22.33■■□□□ 1.17
SPHK1-207ENST00000590959 ATP2B2Q01814 1243 aa22.33■■□□□ 1.17
SPHK1-207ENST00000590959 SULF1Q8IWU6 871 aa22.33■■□□□ 1.17
SPHK1-207ENST00000590959 PHF20Q9BVI0 1012 aa22.33■■□□□ 1.17
SPHK1-207ENST00000590959 SPZ1Q9BXG8 430 aa22.33■■□□□ 1.17
SPHK1-207ENST00000590959 CABP5Q9NP86 173 aa22.33■■□□□ 1.17
SPHK1-207ENST00000590959 RTEL1Q9NZ71 1219 aa22.33■■□□□ 1.17
SPHK1-207ENST00000590959 FZD1Q9UP38 647 aa22.33■■□□□ 1.17
SPHK1-207ENST00000590959 MYH15Q9Y2K3 1946 aa22.33■■□□□ 1.17
SPHK1-207ENST00000590959 MYH6P13533 1939 aa22.33■■□□□ 1.16
SPHK1-207ENST00000590959 USP17L5A8MUK1 530 aa22.32■■□□□ 1.16
SPHK1-207ENST00000590959 BTBD18B2RXH4 712 aa22.32■■□□□ 1.16
SPHK1-207ENST00000590959 SNHG28P0DPA3 235 aa22.32■■□□□ 1.16
SPHK1-207ENST00000590959 YY1P25490 414 aa22.32■■□□□ 1.16
SPHK1-207ENST00000590959 ASPRV1Q53RT3 343 aa22.32■■□□□ 1.16
SPHK1-207ENST00000590959 RASGRP2Q7LDG7 609 aa22.32■■□□□ 1.16
SPHK1-207ENST00000590959 NOSTRINQ8IVI9 506 aa22.32■■□□□ 1.16
SPHK1-207ENST00000590959 PIBF1Q8WXW3 757 aa22.32■■□□□ 1.16
SPHK1-207ENST00000590959 FTOQ9C0B1 505 aaKnown RBP eCLIP22.32■■□□□ 1.165e-7■□□□□ 8.3
SPHK1-207ENST00000590959 POLR3EQ9NVU0 708 aa22.32■■□□□ 1.16
SPHK1-207ENST00000590959 TBC1D12O60347 775 aa22.32■■□□□ 1.16
SPHK1-207ENST00000590959 GDF11O95390 407 aa22.32■■□□□ 1.16
SPHK1-207ENST00000590959 MKL1Q969V6 931 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms