RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 PDHBP11177 359 aa24.77■■□□□ 1.56
CIRBP-229ENST00000590704 COG2Q14746 738 aa24.77■■□□□ 1.56
CIRBP-229ENST00000590704 PPP4R3BQ5MIZ7 849 aa24.77■■□□□ 1.56
CIRBP-229ENST00000590704 RNF20Q5VTR2 975 aa24.77■■□□□ 1.56
CIRBP-229ENST00000590704 CHMP4CQ96CF2 233 aa24.77■■□□□ 1.56
CIRBP-229ENST00000590704 IL17RAQ96F46 866 aa24.77■■□□□ 1.56
CIRBP-229ENST00000590704 NEK1Q96PY6 1258 aa24.77■■□□□ 1.56
CIRBP-229ENST00000590704 PRDM10Q9NQV6 1147 aa24.77■■□□□ 1.56
CIRBP-229ENST00000590704 MORF4L1Q9UBU8 362 aa24.77■■□□□ 1.56
CIRBP-229ENST00000590704 PNMA3Q9UL41 463 aa24.77■■□□□ 1.56
CIRBP-229ENST00000590704 DOCK3Q8IZD9 2030 aa24.76■■□□□ 1.55
CIRBP-229ENST00000590704 CPA1P15085 419 aa24.76■■□□□ 1.55
CIRBP-229ENST00000590704 IRX3P78415 501 aaPredicted RBP24.76■■□□□ 1.55
CIRBP-229ENST00000590704 RALYLQ86SE5 291 aaKnown RBP24.76■■□□□ 1.55
CIRBP-229ENST00000590704 ANKRD13CQ8N6S4 541 aa24.76■■□□□ 1.55
CIRBP-229ENST00000590704 REPS2Q8NFH8 660 aa24.76■■□□□ 1.55
CIRBP-229ENST00000590704 ARHGAP39Q9C0H5 1083 aa24.76■■□□□ 1.55
CIRBP-229ENST00000590704 LY9Q9HBG7 655 aa24.76■■□□□ 1.55
CIRBP-229ENST00000590704 PRC1O43663 620 aa24.75■■□□□ 1.55
CIRBP-229ENST00000590704 SP3Q02447 781 aa24.75■■□□□ 1.55
CIRBP-229ENST00000590704 CCDC178Q5BJE1 867 aa24.75■■□□□ 1.55
CIRBP-229ENST00000590704 TTBK2Q6IQ55 1244 aa24.75■■□□□ 1.55
CIRBP-229ENST00000590704 ATG4CQ96DT6 458 aa24.75■■□□□ 1.55
CIRBP-229ENST00000590704 HTTP42858 3142 aa24.74■■□□□ 1.55
CIRBP-229ENST00000590704 IFIT3O14879 490 aaKnown RBP24.74■■□□□ 1.55
CIRBP-229ENST00000590704 FKTNO75072 461 aa24.74■■□□□ 1.55
CIRBP-229ENST00000590704 BMP3P12645 472 aa24.74■■□□□ 1.55
CIRBP-229ENST00000590704 PNMA1Q8ND90 353 aa24.74■■□□□ 1.55
CIRBP-229ENST00000590704 TCEANC2Q96MN5 208 aa24.74■■□□□ 1.55
CIRBP-229ENST00000590704 MTA3Q9BTC8 594 aa24.74■■□□□ 1.55
CIRBP-229ENST00000590704 LRRC2Q9BYS8 371 aa24.74■■□□□ 1.55
CIRBP-229ENST00000590704 TANGO6Q9C0B7 1094 aa24.74■■□□□ 1.55
CIRBP-229ENST00000590704 PPP1R9AQ9ULJ8 1098 aa24.74■■□□□ 1.55
CIRBP-229ENST00000590704 A0A0G2JMZ2 1700 aa24.74■■□□□ 1.55
CIRBP-229ENST00000590704 SH2B2O14492 632 aaPredicted RBP24.73■■□□□ 1.55
CIRBP-229ENST00000590704 RAD21O60216 631 aa24.73■■□□□ 1.55
CIRBP-229ENST00000590704 MCM5P33992 734 aa24.73■■□□□ 1.55
CIRBP-229ENST00000590704 GCLCP48506 637 aaPredicted RBP24.73■■□□□ 1.55
CIRBP-229ENST00000590704 FAM110CQ1W6H9 321 aa24.73■■□□□ 1.55
CIRBP-229ENST00000590704 KCTD1Q719H9 257 aa24.73■■□□□ 1.55
CIRBP-229ENST00000590704 SMCR8Q8TEV9 937 aaPredicted RBP24.73■■□□□ 1.55
CIRBP-229ENST00000590704 UBAC1Q9BSL1 405 aa24.73■■□□□ 1.55
CIRBP-229ENST00000590704 HOXC10Q9NYD6 342 aa24.73■■□□□ 1.55
CIRBP-229ENST00000590704 MYPNQ86TC9 1320 aa24.73■■□□□ 1.55
CIRBP-229ENST00000590704 PLA2G6O60733 806 aa24.72■■□□□ 1.55
CIRBP-229ENST00000590704 FLOT1O75955 427 aa24.72■■□□□ 1.55
CIRBP-229ENST00000590704 ZKSCAN1P17029 563 aaPredicted RBP24.72■■□□□ 1.55
CIRBP-229ENST00000590704 LACTBP83111 547 aaPredicted RBP24.72■■□□□ 1.55
CIRBP-229ENST00000590704 TROAPQ12815 778 aa24.72■■□□□ 1.55
CIRBP-229ENST00000590704 DHX32Q7L7V1 743 aaKnown RBP24.72■■□□□ 1.55
CIRBP-229ENST00000590704 CD99L2Q8TCZ2 262 aa24.72■■□□□ 1.55
CIRBP-229ENST00000590704 SLC1A4P43007 532 aa24.71■■□□□ 1.55
CIRBP-229ENST00000590704 ZNF543Q08ER8 600 aa24.71■■□□□ 1.55
CIRBP-229ENST00000590704 SLC35G1Q2M3R5 365 aa24.71■■□□□ 1.55
CIRBP-229ENST00000590704 IFIT1BQ5T764 474 aaKnown RBP24.71■■□□□ 1.55
CIRBP-229ENST00000590704 BTNL9Q6UXG8 535 aa24.71■■□□□ 1.55
CIRBP-229ENST00000590704 DCAF4Q8WV16 495 aa24.71■■□□□ 1.55
CIRBP-229ENST00000590704 RABGAP1Q9Y3P9 1069 aa24.71■■□□□ 1.55
CIRBP-229ENST00000590704 COL11A1P12107 1806 aaPredicted RBP24.71■■□□□ 1.55
CIRBP-229ENST00000590704 TMEM232C9JQI7 657 aa24.7■■□□□ 1.55
CIRBP-229ENST00000590704 KRT32Q14532 448 aa24.7■■□□□ 1.55
CIRBP-229ENST00000590704 TMEM67Q5HYA8 995 aa24.7■■□□□ 1.55
CIRBP-229ENST00000590704 JAKMIP1Q96N16 626 aaKnown RBP24.7■■□□□ 1.55
CIRBP-229ENST00000590704 ZSWIM6Q9HCJ5 1215 aa24.7■■□□□ 1.55
CIRBP-229ENST00000590704 MTMR7Q9Y216 660 aa24.7■■□□□ 1.55
CIRBP-229ENST00000590704 SMCHD1A6NHR9 2005 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 VWA5AO00534 786 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 ERVK-9P63128 1117 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 ERVK-24P63145 666 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 TMEM132BQ14DG7 1078 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 STAG2Q8N3U4 1231 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 TMEM87BQ96K49 555 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 SLF1Q9BQI6 1058 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 PORCNQ9H237 461 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 KAT14Q9H8E8 782 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 FEM1BQ9UK73 627 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 ZNF214Q9UL59 606 aaPredicted RBP24.7■■□□□ 1.54
CIRBP-229ENST00000590704 WDR19Q8NEZ3 1342 aa24.7■■□□□ 1.54
CIRBP-229ENST00000590704 LIFRP42702 1097 aa24.69■■□□□ 1.54
CIRBP-229ENST00000590704 WTAPQ15007 396 aa24.69■■□□□ 1.54
CIRBP-229ENST00000590704 FRMPD2Q68DX3 1309 aaPredicted RBP24.69■■□□□ 1.54
CIRBP-229ENST00000590704 PRPF38AQ8NAV1 312 aaKnown RBP24.69■■□□□ 1.54
CIRBP-229ENST00000590704 TRIM47Q96LD4 638 aa24.69■■□□□ 1.54
CIRBP-229ENST00000590704 AGXT2Q9BYV1 514 aa24.69■■□□□ 1.54
CIRBP-229ENST00000590704 CPVLQ9H3G5 476 aa24.69■■□□□ 1.54
CIRBP-229ENST00000590704 GOLGA8HP0CJ92 632 aa24.68■■□□□ 1.54
CIRBP-229ENST00000590704 SLC16A2P36021 539 aa24.68■■□□□ 1.54
CIRBP-229ENST00000590704 SGMS1Q86VZ5 419 aa24.68■■□□□ 1.54
CIRBP-229ENST00000590704 FBXL16Q8N461 479 aa24.68■■□□□ 1.54
CIRBP-229ENST00000590704 PAGR1Q9BTK6 254 aa24.68■■□□□ 1.54
CIRBP-229ENST00000590704 TM6SF1Q9BZW5 370 aa24.68■■□□□ 1.54
CIRBP-229ENST00000590704 MAD2L2Q9UI95 211 aa24.68■■□□□ 1.54
CIRBP-229ENST00000590704 BRPF3Q9ULD4 1205 aa24.68■■□□□ 1.54
CIRBP-229ENST00000590704 CENPFP49454 3210 aa24.68■■□□□ 1.54
CIRBP-229ENST00000590704 ZNF536O15090 1300 aa24.67■■□□□ 1.54
CIRBP-229ENST00000590704 RPS6KB1P23443 525 aa24.67■■□□□ 1.54
CIRBP-229ENST00000590704 GPRC5AQ8NFJ5 357 aa24.67■■□□□ 1.54
CIRBP-229ENST00000590704 GTF3C2Q8WUA4 911 aaPredicted RBP24.67■■□□□ 1.54
CIRBP-229ENST00000590704 KIF2CQ99661 725 aa24.67■■□□□ 1.54
CIRBP-229ENST00000590704 SLC38A10Q9HBR0 1119 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms