RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 KLRF2D3W0D1 207 aa19.64■□□□□ 0.73
GCDH-212ENST00000590530 PARP1P09874 1014 aaKnown RBP19.64■□□□□ 0.73
GCDH-212ENST00000590530 FMR1Q06787 632 aaKnown RBP eCLIP19.64■□□□□ 0.73
GCDH-212ENST00000590530 KCTD1Q719H9 257 aa19.64■□□□□ 0.73
GCDH-212ENST00000590530 WASF1Q92558 559 aa19.64■□□□□ 0.73
GCDH-212ENST00000590530 GDPD2Q9HCC8 539 aa19.64■□□□□ 0.73
GCDH-212ENST00000590530 ELP1O95163 1332 aa19.64■□□□□ 0.73
GCDH-212ENST00000590530 BAZ2BQ9UIF8 2168 aaKnown RBP19.63■□□□□ 0.73
GCDH-212ENST00000590530 FIBPO43427 364 aa19.63■□□□□ 0.73
GCDH-212ENST00000590530 NCLP19338 710 aaKnown RBP19.63■□□□□ 0.73
GCDH-212ENST00000590530 KIF5BP33176 963 aa19.63■□□□□ 0.73
GCDH-212ENST00000590530 SPICE1Q8N0Z3 855 aa19.63■□□□□ 0.73
GCDH-212ENST00000590530 ZNF526Q8TF50 670 aaPredicted RBP19.63■□□□□ 0.73
GCDH-212ENST00000590530 WRNIP1Q96S55 665 aa19.63■□□□□ 0.73
GCDH-212ENST00000590530 ZNF341Q9BYN7 854 aa19.63■□□□□ 0.73
GCDH-212ENST00000590530 ZNF112Q9UJU3 913 aa19.63■□□□□ 0.73
GCDH-212ENST00000590530 PPP2R3BQ9Y5P8 575 aa19.63■□□□□ 0.73
GCDH-212ENST00000590530 IQCA1LA6NCM1 817 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 F5H6K3 240 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 KLRC3Q07444 240 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 DGKZQ13574 1117 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 ZYXQ15942 572 aaKnown RBP19.62■□□□□ 0.73
GCDH-212ENST00000590530 TRIM22Q8IYM9 498 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 SCAND2PQ9GZW5 306 aaPredicted RBP19.62■□□□□ 0.73
GCDH-212ENST00000590530 MYH6P13533 1939 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 PRPF3O43395 683 aaKnown RBP19.62■□□□□ 0.73
GCDH-212ENST00000590530 USP2O75604 605 aaPredicted RBP19.62■□□□□ 0.73
GCDH-212ENST00000590530 NDUFB10O96000 172 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 SLC16A2P36021 539 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 ZNF543Q08ER8 600 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 SLFN13Q68D06 897 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 ATL3Q6DD88 541 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 MOB2Q70IA6 237 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 RNF26Q9BY78 433 aaPredicted RBP19.62■□□□□ 0.73
GCDH-212ENST00000590530 VAT1LQ9HCJ6 419 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.62■□□□□ 0.73
GCDH-212ENST00000590530 WDR90Q96KV7 1748 aa19.62■□□□□ 0.73
GCDH-212ENST00000590530 CTNND1O60716 968 aaKnown RBP19.61■□□□□ 0.73
GCDH-212ENST00000590530 UBE2HP62256 183 aa19.61■□□□□ 0.73
GCDH-212ENST00000590530 DCAF15Q66K64 600 aa19.61■□□□□ 0.73
GCDH-212ENST00000590530 MAP1SQ66K74 1059 aaPredicted RBP19.61■□□□□ 0.73
GCDH-212ENST00000590530 ZC3H15Q8WU90 426 aaKnown RBP19.61■□□□□ 0.73
GCDH-212ENST00000590530 KLRG1Q96E93 195 aa19.61■□□□□ 0.73
GCDH-212ENST00000590530 CDCA5Q96FF9 252 aa19.61■□□□□ 0.73
GCDH-212ENST00000590530 NMRK2Q9NPI5 230 aa19.61■□□□□ 0.73
GCDH-212ENST00000590530 KCNJ14Q9UNX9 436 aa19.61■□□□□ 0.73
GCDH-212ENST00000590530 ASNSP08243 561 aa19.6■□□□□ 0.73
GCDH-212ENST00000590530 CCDC96Q2M329 555 aa19.6■□□□□ 0.73
GCDH-212ENST00000590530 KRT40Q6A162 431 aa19.6■□□□□ 0.73
GCDH-212ENST00000590530 GZF1Q9H116 711 aaPredicted RBP19.6■□□□□ 0.73
GCDH-212ENST00000590530 TMX2Q9Y320 296 aa19.6■□□□□ 0.73
GCDH-212ENST00000590530 MYH4Q9Y623 1939 aa19.6■□□□□ 0.73
GCDH-212ENST00000590530 KIF28PB7ZC32 967 aa19.6■□□□□ 0.73
GCDH-212ENST00000590530 DEXIO95424 95 aa19.6■□□□□ 0.73
GCDH-212ENST00000590530 SUPT20HL1Q3ZLR7 823 aa19.6■□□□□ 0.73
GCDH-212ENST00000590530 VPS54Q9P1Q0 977 aa19.6■□□□□ 0.73
GCDH-212ENST00000590530 CLEC11AQ9Y240 323 aa19.6■□□□□ 0.73
GCDH-212ENST00000590530 TRAF5O00463 557 aa19.59■□□□□ 0.73
GCDH-212ENST00000590530 ADAMTS3O15072 1205 aa19.59■□□□□ 0.73
GCDH-212ENST00000590530 GADD45BO75293 160 aaPredicted RBP19.59■□□□□ 0.73
GCDH-212ENST00000590530 BRAPQ7Z569 592 aa19.59■□□□□ 0.73
GCDH-212ENST00000590530 GPKOWQ92917 476 aaPredicted RBP eCLIP19.59■□□□□ 0.73
GCDH-212ENST00000590530 CFAP45Q9UL16 551 aa19.59■□□□□ 0.73
GCDH-212ENST00000590530 ISY1Q9ULR0 285 aaKnown RBP19.59■□□□□ 0.73
GCDH-212ENST00000590530 SCN4AP35499 1836 aa19.59■□□□□ 0.73
GCDH-212ENST00000590530 SLC1A4P43007 532 aa19.58■□□□□ 0.73
GCDH-212ENST00000590530 PNMA8AQ86V59 439 aaPredicted RBP19.58■□□□□ 0.73
GCDH-212ENST00000590530 GMCL1P1Q8NEA9 526 aa19.58■□□□□ 0.73
GCDH-212ENST00000590530 ARHGEF10LQ9HCE6 1279 aa19.58■□□□□ 0.73
GCDH-212ENST00000590530 DEKP35659 375 aaKnown RBP19.58■□□□□ 0.72
GCDH-212ENST00000590530 GNAQP50148 359 aa19.58■□□□□ 0.72
GCDH-212ENST00000590530 AKAP17AQ02040 695 aaKnown RBP19.58■□□□□ 0.72
GCDH-212ENST00000590530 KIF23Q02241 960 aaPredicted RBP19.58■□□□□ 0.72
GCDH-212ENST00000590530 TRIM29Q14134 588 aa19.58■□□□□ 0.72
GCDH-212ENST00000590530 ASPRV1Q53RT3 343 aa19.58■□□□□ 0.72
GCDH-212ENST00000590530 PPP4R3BQ5MIZ7 849 aa19.58■□□□□ 0.72
GCDH-212ENST00000590530 TYW1BQ6NUM6 668 aa19.58■□□□□ 0.72
GCDH-212ENST00000590530 CAVIN1Q6NZI2 390 aaKnown RBP19.58■□□□□ 0.72
GCDH-212ENST00000590530 HOMER1Q86YM7 354 aa19.58■□□□□ 0.72
GCDH-212ENST00000590530 SCYL3Q8IZE3 742 aa19.58■□□□□ 0.72
GCDH-212ENST00000590530 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.58■□□□□ 0.72
GCDH-212ENST00000590530 ZNF396Q96N95 335 aaPredicted RBP19.58■□□□□ 0.72
GCDH-212ENST00000590530 PIGSQ96S52 555 aa19.58■□□□□ 0.72
GCDH-212ENST00000590530 PTPRAP18433 802 aa19.57■□□□□ 0.72
GCDH-212ENST00000590530 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.57■□□□□ 0.72
GCDH-212ENST00000590530 LEO1Q8WVC0 666 aaPredicted RBP19.57■□□□□ 0.72
GCDH-212ENST00000590530 SPZ1Q9BXG8 430 aa19.57■□□□□ 0.72
GCDH-212ENST00000590530 RIOX1Q9H6W3 641 aa19.57■□□□□ 0.72
GCDH-212ENST00000590530 USP17L10C9JJH3 530 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 SNAP25P60880 206 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 PFKFB3Q16875 520 aaPredicted RBP19.56■□□□□ 0.72
GCDH-212ENST00000590530 ADGRF4Q8IZF3 695 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 DCAF4Q8WV16 495 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 CNKSR2Q8WXI2 1034 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 HOOK2Q96ED9 719 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 SPATA32Q96LK8 384 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 JMJD4Q9H9V9 463 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 SCG2P13521 617 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 FAM83BQ5T0W9 1011 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 OXER1Q8TDS5 423 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms