RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 AMOTQ4VCS5 1084 aa16.98■□□□□ 0.31
CIRBP-228ENST00000590347 HIBCHQ6NVY1 386 aaPredicted RBP16.98■□□□□ 0.31
CIRBP-228ENST00000590347 SPATS2LQ9NUQ6 558 aaKnown RBP16.98■□□□□ 0.31
CIRBP-228ENST00000590347 ZNF335Q9H4Z2 1342 aaPredicted RBP16.98■□□□□ 0.31
CIRBP-228ENST00000590347 GOLGA8KD6RF30 607 aa16.98■□□□□ 0.31
CIRBP-228ENST00000590347 CLTAP09496 248 aa16.98■□□□□ 0.31
CIRBP-228ENST00000590347 CALRP27797 417 aaKnown RBP16.98■□□□□ 0.31
CIRBP-228ENST00000590347 IRX1P78414 480 aaPredicted RBP16.98■□□□□ 0.31
CIRBP-228ENST00000590347 MAATS1Q7Z4T9 603 aa16.98■□□□□ 0.31
CIRBP-228ENST00000590347 CNGA4Q8IV77 575 aa16.98■□□□□ 0.31
CIRBP-228ENST00000590347 EPN3Q9H201 632 aa16.98■□□□□ 0.31
CIRBP-228ENST00000590347 NFU1Q9UMS0 254 aa16.98■□□□□ 0.31
CIRBP-228ENST00000590347 MRPL12P52815 198 aaKnown RBP16.97■□□□□ 0.31
CIRBP-228ENST00000590347 HERVK_113P62684 666 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 PTGISQ16647 500 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 NBPF14Q5TI25 921 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 KRT26Q7Z3Y9 468 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 MARF1Q9Y4F3 1742 aaKnown RBP16.97■□□□□ 0.31
CIRBP-228ENST00000590347 CEMIPQ8WUJ3 1361 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 LTN1O94822 1766 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 RGPD2P0DJD1 1756 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 BTBD18B2RXH4 712 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 NBPF20Q3BBV1 942 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 FILIP1LQ4L180 1135 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 CYP26C1Q6V0L0 522 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 RASSF8Q8NHQ8 419 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 ZNF274Q96GC6 653 aaPredicted RBP16.97■□□□□ 0.31
CIRBP-228ENST00000590347 INCENPQ9NQS7 918 aa16.97■□□□□ 0.31
CIRBP-228ENST00000590347 GRM8O00222 908 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 OPA1O60313 960 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 PPP1R37O75864 691 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 NR1D1P20393 614 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 MORC3Q14149 939 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 KRT31Q15323 416 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 PPP1R7Q15435 360 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 WASHC4Q2M389 1173 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 TMTC1Q8IUR5 882 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 BORCS6Q96GS4 357 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 GGT7Q9UJ14 662 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 ZNF233A6NK53 670 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 HGSO14964 777 aaPredicted RBP16.96■□□□□ 0.31
CIRBP-228ENST00000590347 HMGB1P09429 215 aaKnown RBP16.96■□□□□ 0.31
CIRBP-228ENST00000590347 PLCD1P51178 756 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 GRIK3Q13003 919 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 NFRKBQ6P4R8 1299 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 MICALCLQ6ZW33 695 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 CADPS2Q86UW7 1296 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 MLKLQ8NB16 471 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 TATP17735 454 aaPredicted RBP16.96■□□□□ 0.31
CIRBP-228ENST00000590347 CARSP49589 748 aaKnown RBP16.96■□□□□ 0.31
CIRBP-228ENST00000590347 CYFIP2Q96F07 1278 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 EPSTI1Q96J88 318 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 MS4A14Q96JA4 679 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 MAP3K14Q99558 947 aa16.96■□□□□ 0.31
CIRBP-228ENST00000590347 M0R2C6 588 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 TUBBP07437 444 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 UBXN1Q04323 297 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 TNNI3KQ59H18 835 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 TLDC1Q6P9B6 456 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 NAA15Q9BXJ9 866 aaKnown RBP16.95■□□□□ 0.3
CIRBP-228ENST00000590347 PRDM11Q9NQV5 511 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 VPS54Q9P1Q0 977 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 FPGT-TNNI3KV9GXZ4 949 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 TTC26A0AVF1 554 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 KLHL33A6NCF5 533 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 CFAP58Q5T655 872 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 KRI1Q8N9T8 703 aaKnown RBP16.95■□□□□ 0.3
CIRBP-228ENST00000590347 MLXIPQ9HAP2 919 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 PALLDQ8WX93 1383 aa16.95■□□□□ 0.3
CIRBP-228ENST00000590347 ERCC3P19447 782 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 NR5A1Q13285 461 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 TUBB2AQ13885 445 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 PTPROQ16827 1216 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 ZNF496Q96IT1 587 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-228ENST00000590347 TUBB2BQ9BVA1 445 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 SLC39A2Q9NP94 309 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 ZNF330Q9Y3S2 320 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-228ENST00000590347 PCDHB6Q9Y5E3 794 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 A0A087X0B3 334 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 ANKRD18BA2A2Z9 1011 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 PHF20L1A8MW92 1017 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 MCM3P25205 808 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 KLK7P49862 253 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 FKBP4Q02790 459 aaKnown RBP eCLIP16.94■□□□□ 0.3
CIRBP-228ENST00000590347 ETAA1Q9NY74 926 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 DBF4Q9UBU7 674 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-228ENST00000590347 TOM1L2Q6ZVM7 507 aa16.94■□□□□ 0.3
CIRBP-228ENST00000590347 FAM205CA6NFA0 338 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 CYP27B1O15528 508 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 PBX1P40424 430 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 ZKSCAN8Q15776 578 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-228ENST00000590347 GNPTABQ3T906 1256 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 BRINP3Q76B58 766 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 TATDN2Q93075 761 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 RSRC1Q96IZ7 334 aaKnown RBP16.93■□□□□ 0.3
CIRBP-228ENST00000590347 GUCY1A2P33402 732 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 SPATA1Q5VX52 437 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 NUP58Q9BVL2 599 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 SLC26A6Q9BXS9 759 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 NOD2Q9HC29 1040 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms