RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 KLRC3Q07444 240 aa16.36■□□□□ 0.21
NEDD4L-228ENST00000590248 TMEM132BQ14DG7 1078 aa16.36■□□□□ 0.21
NEDD4L-228ENST00000590248 UBE2Q1Q7Z7E8 422 aa16.36■□□□□ 0.21
NEDD4L-228ENST00000590248 NPLOC4Q8TAT6 608 aa16.36■□□□□ 0.21
NEDD4L-228ENST00000590248 DPF3Q92784 378 aa16.36■□□□□ 0.21
NEDD4L-228ENST00000590248 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
NEDD4L-228ENST00000590248 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
NEDD4L-228ENST00000590248 ALPK3Q96L96 1907 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 SLC15A5A6NIM6 579 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 FARP2O94887 1054 aaPredicted RBP16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 NDUFB10O96000 172 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 TSPY3P0CV98 308 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 TSPY8P0CW00 308 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 CCND3P30281 292 aaPredicted RBP16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 PDE4BQ07343 736 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 CACNB2Q08289 660 aaPredicted RBP16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 GRB14Q14449 540 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 MCMDC2Q4G0Z9 681 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 ZNF589Q86UQ0 364 aaPredicted RBP16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 NCAPG2Q86XI2 1143 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 LRRC47Q8N1G4 583 aaKnown RBP16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 CRISPLD2Q9H0B8 497 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 ZNF287Q9HBT7 754 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 MTMR4Q9NYA4 1195 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 IVNS1ABPQ9Y6Y0 642 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 PLXNA1Q9UIW2 1896 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
NEDD4L-228ENST00000590248 SLC3A2P08195 630 aaKnown RBP16.34■□□□□ 0.21
NEDD4L-228ENST00000590248 MAP3K21Q5TCX8 1036 aa16.34■□□□□ 0.21
NEDD4L-228ENST00000590248 NEDD1Q8NHV4 660 aa16.34■□□□□ 0.21
NEDD4L-228ENST00000590248 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
NEDD4L-228ENST00000590248 PAWRQ96IZ0 340 aaKnown RBP16.34■□□□□ 0.21
NEDD4L-228ENST00000590248 APBA2Q99767 749 aa16.34■□□□□ 0.21
NEDD4L-228ENST00000590248 OSBPL3Q9H4L5 887 aa16.34■□□□□ 0.21
NEDD4L-228ENST00000590248 ADAMTS5Q9UNA0 930 aa16.34■□□□□ 0.21
NEDD4L-228ENST00000590248 FRMPD3Q5JV73 1810 aa16.33■□□□□ 0.21
NEDD4L-228ENST00000590248 VWA5AO00534 786 aa16.33■□□□□ 0.2
NEDD4L-228ENST00000590248 NMT2O60551 498 aa16.33■□□□□ 0.2
NEDD4L-228ENST00000590248 FGAP02671 866 aa16.33■□□□□ 0.2
NEDD4L-228ENST00000590248 HSPD1P10809 573 aaKnown RBP16.33■□□□□ 0.2
NEDD4L-228ENST00000590248 SDSP20132 328 aa16.33■□□□□ 0.2
NEDD4L-228ENST00000590248 ADORA2AP29274 412 aa16.33■□□□□ 0.2
NEDD4L-228ENST00000590248 DPP9Q86TI2 863 aa16.33■□□□□ 0.2
NEDD4L-228ENST00000590248 MB21D1Q8N884 522 aa16.33■□□□□ 0.2
NEDD4L-228ENST00000590248 MKL1Q969V6 931 aa16.33■□□□□ 0.2
NEDD4L-228ENST00000590248 PPP1R9AQ9ULJ8 1098 aa16.33■□□□□ 0.2
NEDD4L-228ENST00000590248 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
NEDD4L-228ENST00000590248 COBLO75128 1261 aa16.32■□□□□ 0.2
NEDD4L-228ENST00000590248 TTLL1O95922 423 aa16.32■□□□□ 0.2
NEDD4L-228ENST00000590248 PDE4AP27815 886 aa16.32■□□□□ 0.2
NEDD4L-228ENST00000590248 CYP2C19P33261 490 aa16.32■□□□□ 0.2
NEDD4L-228ENST00000590248 HAND2P61296 217 aa16.32■□□□□ 0.2
NEDD4L-228ENST00000590248 TRMT44Q8IYL2 757 aaKnown RBP16.32■□□□□ 0.2
NEDD4L-228ENST00000590248 TSPY2A6NKD2 308 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 H0YGN5 161 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 HOXC6P09630 235 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 STAT3P40763 770 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 SLC4A3P48751 1232 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 ALX1Q15699 326 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 SLFN13Q68D06 897 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 CWC27Q6UX04 472 aaKnown RBP16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 SHCBP1Q8NEM2 672 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 REPS2Q8NFH8 660 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 SLF1Q9BQI6 1058 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 MROH8Q9H579 483 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 IL17RBQ9NRM6 502 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 ANAPC4Q9UJX5 808 aa16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 ZNF214Q9UL59 606 aaPredicted RBP16.31■□□□□ 0.2
NEDD4L-228ENST00000590248 CEP290O15078 2479 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 PLIN4Q96Q06 1357 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 CCDC171Q6TFL3 1326 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 STRNO43815 780 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 MNX1P50219 401 aaPredicted RBP16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 RRP12Q5JTH9 1297 aaKnown RBP16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 MFSD14CQ5VZR4 134 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 LHX8Q68G74 356 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 CPXCR1Q8N123 301 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 KIFC2Q96AC6 838 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 TOMM22Q9NS69 142 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 MTMR7Q9Y216 660 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 RIPK3Q9Y572 518 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 ZNF236Q9UL36 1845 aa16.3■□□□□ 0.2
NEDD4L-228ENST00000590248 PGK2P07205 417 aa16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 CNGA1P29973 690 aa16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 PRAMEF19Q5SWL8 479 aa16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 RASGRP2Q7LDG7 609 aa16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 RIOX2Q8IUF8 465 aa16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 PRPF38AQ8NAV1 312 aaKnown RBP16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 MMP19Q99542 508 aa16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 HTATIP2Q9BUP3 242 aa16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 OGDHLQ9ULD0 1010 aa16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 ISY1Q9ULR0 285 aaKnown RBP16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 MCM3APO60318 1980 aa16.29■□□□□ 0.2
NEDD4L-228ENST00000590248 SLC25A27O95847 323 aa16.28■□□□□ 0.2
NEDD4L-228ENST00000590248 FCER1AP12319 257 aa16.28■□□□□ 0.2
NEDD4L-228ENST00000590248 BMP3P12645 472 aa16.28■□□□□ 0.2
NEDD4L-228ENST00000590248 MCCP23508 829 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms