RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 RABGAP1Q9Y3P9 1069 aa25.03■■□□□ 1.6
ATG4D-212ENST00000590096 ERICH2A1L162 156 aa25.02■■□□□ 1.6
ATG4D-212ENST00000590096 ECM2O94769 699 aaPredicted RBP25.02■■□□□ 1.6
ATG4D-212ENST00000590096 MCCP23508 829 aa25.02■■□□□ 1.6
ATG4D-212ENST00000590096 MB21D2Q8IYB1 491 aaPredicted RBP25.02■■□□□ 1.6
ATG4D-212ENST00000590096 ENAHQ8N8S7 591 aaPredicted RBP25.02■■□□□ 1.6
ATG4D-212ENST00000590096 ABHD8Q96I13 439 aa25.02■■□□□ 1.6
ATG4D-212ENST00000590096 KAT14Q9H8E8 782 aa25.02■■□□□ 1.6
ATG4D-212ENST00000590096 EFCC1Q9HA90 598 aa25.02■■□□□ 1.6
ATG4D-212ENST00000590096 RBPJLQ9UBG7 517 aa25.02■■□□□ 1.6
ATG4D-212ENST00000590096 PARP14Q460N5 1801 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 EPB41L2O43491 1005 aaKnown RBP25.01■■□□□ 1.59
ATG4D-212ENST00000590096 PSMC4P43686 418 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 FCGRTP55899 365 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 ERVK-9P63128 1117 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 ERVK-24P63145 666 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 IFIT1BQ5T764 474 aaKnown RBP25.01■■□□□ 1.59
ATG4D-212ENST00000590096 MB21D1Q8N884 522 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 DCAF4Q8WV16 495 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 ANKS1AQ92625 1134 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 CHMP4CQ96CF2 233 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 SLF1Q9BQI6 1058 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 TXNRD2Q9NNW7 524 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 FBXO28Q9NVF7 368 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 FEM1BQ9UK73 627 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 PPP1R9AQ9ULJ8 1098 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 TRIM17Q9Y577 477 aa25.01■■□□□ 1.59
ATG4D-212ENST00000590096 RLFQ13129 1914 aa25■■□□□ 1.59
ATG4D-212ENST00000590096 IFIT3O14879 490 aaKnown RBP25■■□□□ 1.59
ATG4D-212ENST00000590096 EIF5BO60841 1220 aaKnown RBP25■■□□□ 1.59
ATG4D-212ENST00000590096 FMNL1O95466 1100 aaPredicted RBP25■■□□□ 1.59
ATG4D-212ENST00000590096 KRT32Q14532 448 aa25■■□□□ 1.59
ATG4D-212ENST00000590096 CCDC96Q2M329 555 aa25■■□□□ 1.59
ATG4D-212ENST00000590096 ATG4CQ96DT6 458 aa25■■□□□ 1.59
ATG4D-212ENST00000590096 ARHGAP39Q9C0H5 1083 aa25■■□□□ 1.59
ATG4D-212ENST00000590096 TMEM232C9JQI7 657 aa24.99■■□□□ 1.59
ATG4D-212ENST00000590096 MGAMO43451 1857 aa24.99■■□□□ 1.59
ATG4D-212ENST00000590096 GNRH1P01148 92 aa24.99■■□□□ 1.59
ATG4D-212ENST00000590096 MCM5P33992 734 aa24.99■■□□□ 1.59
ATG4D-212ENST00000590096 HSPA4P34932 840 aa24.99■■□□□ 1.59
ATG4D-212ENST00000590096 CCNA1P78396 465 aa24.99■■□□□ 1.59
ATG4D-212ENST00000590096 IKQ13123 557 aaPredicted RBP24.99■■□□□ 1.59
ATG4D-212ENST00000590096 OTOP1Q7RTM1 612 aa24.99■■□□□ 1.59
ATG4D-212ENST00000590096 CCAR1Q8IX12 1150 aaKnown RBP24.99■■□□□ 1.59
ATG4D-212ENST00000590096 PRPF38AQ8NAV1 312 aaKnown RBP24.99■■□□□ 1.59
ATG4D-212ENST00000590096 PNMA1Q8ND90 353 aa24.99■■□□□ 1.59
ATG4D-212ENST00000590096 ZSWIM8A7E2V4 1837 aa24.98■■□□□ 1.59
ATG4D-212ENST00000590096 PEX10O60683 326 aa24.98■■□□□ 1.59
ATG4D-212ENST00000590096 STAT2P52630 851 aa24.98■■□□□ 1.59
ATG4D-212ENST00000590096 PKN2Q16513 984 aaKnown RBP24.98■■□□□ 1.59
ATG4D-212ENST00000590096 TSGA10IPQ3SY00 556 aa24.98■■□□□ 1.59
ATG4D-212ENST00000590096 KCTD1Q719H9 257 aa24.98■■□□□ 1.59
ATG4D-212ENST00000590096 CHST3Q7LGC8 479 aa24.98■■□□□ 1.59
ATG4D-212ENST00000590096 RASEFQ8IZ41 740 aa24.98■■□□□ 1.59
ATG4D-212ENST00000590096 CHURC1Q8WUH1 139 aa24.98■■□□□ 1.59
ATG4D-212ENST00000590096 A0A0G2JMZ2 1700 aa24.98■■□□□ 1.59
ATG4D-212ENST00000590096 CNMDO75829 334 aa24.97■■□□□ 1.59
ATG4D-212ENST00000590096 HOXD10P28358 340 aa24.97■■□□□ 1.59
ATG4D-212ENST00000590096 CAP1Q01518 475 aa24.97■■□□□ 1.59
ATG4D-212ENST00000590096 WTAPQ15007 396 aa24.97■■□□□ 1.59
ATG4D-212ENST00000590096 SEC23AQ15436 765 aa24.97■■□□□ 1.59
ATG4D-212ENST00000590096 POTEEQ6S8J3 1075 aa24.97■■□□□ 1.59
ATG4D-212ENST00000590096 FAM160B2Q86V87 743 aa24.97■■□□□ 1.59
ATG4D-212ENST00000590096 KIFC2Q96AC6 838 aa24.97■■□□□ 1.59
ATG4D-212ENST00000590096 TRIM47Q96LD4 638 aa24.97■■□□□ 1.59
ATG4D-212ENST00000590096 NEK1Q96PY6 1258 aa24.97■■□□□ 1.59
ATG4D-212ENST00000590096 BTBD7Q9P203 1132 aa24.97■■□□□ 1.59
ATG4D-212ENST00000590096 CTDP1Q9Y5B0 961 aaPredicted RBP24.97■■□□□ 1.59
ATG4D-212ENST00000590096 VWA5AO00534 786 aa24.96■■□□□ 1.59
ATG4D-212ENST00000590096 TNPO2O14787 897 aaKnown RBP24.96■■□□□ 1.59
ATG4D-212ENST00000590096 PRC1O43663 620 aa24.96■■□□□ 1.59
ATG4D-212ENST00000590096 PDHBP11177 359 aa24.96■■□□□ 1.59
ATG4D-212ENST00000590096 CTGFP29279 349 aa24.96■■□□□ 1.59
ATG4D-212ENST00000590096 ANTXR2P58335 489 aa24.96■■□□□ 1.59
ATG4D-212ENST00000590096 Q3C1V9 767 aa24.96■■□□□ 1.59
ATG4D-212ENST00000590096 TMEM67Q5HYA8 995 aa24.96■■□□□ 1.59
ATG4D-212ENST00000590096 RASGRP2Q7LDG7 609 aa24.96■■□□□ 1.59
ATG4D-212ENST00000590096 MTA3Q9BTC8 594 aa24.96■■□□□ 1.59
ATG4D-212ENST00000590096 USP26Q9BXU7 913 aa24.96■■□□□ 1.59
ATG4D-212ENST00000590096 CWC22Q9HCG8 908 aaKnown RBP24.96■■□□□ 1.59
ATG4D-212ENST00000590096 ADAMTS5Q9UNA0 930 aa24.96■■□□□ 1.59
ATG4D-212ENST00000590096 PLA2G6O60733 806 aa24.95■■□□□ 1.58
ATG4D-212ENST00000590096 PLS1Q14651 629 aa24.95■■□□□ 1.58
ATG4D-212ENST00000590096 KCNB2Q92953 911 aa24.95■■□□□ 1.58
ATG4D-212ENST00000590096 COA7Q96BR5 231 aa24.95■■□□□ 1.58
ATG4D-212ENST00000590096 MCOLN1Q9GZU1 580 aa24.95■■□□□ 1.58
ATG4D-212ENST00000590096 FRMPD2Q68DX3 1309 aaPredicted RBP24.94■■□□□ 1.58
ATG4D-212ENST00000590096 COL11A1P12107 1806 aaPredicted RBP24.94■■□□□ 1.58
ATG4D-212ENST00000590096 ZBED4O75132 1171 aa24.94■■□□□ 1.58
ATG4D-212ENST00000590096 MAPK4P31152 587 aa24.94■■□□□ 1.58
ATG4D-212ENST00000590096 TMEM87BQ96K49 555 aa24.94■■□□□ 1.58
ATG4D-212ENST00000590096 SPATC1LQ9H0A9 340 aa24.94■■□□□ 1.58
ATG4D-212ENST00000590096 SNX14Q9Y5W7 946 aa24.94■■□□□ 1.58
ATG4D-212ENST00000590096 HMGB1P09429 215 aaKnown RBP24.93■■□□□ 1.58
ATG4D-212ENST00000590096 SNHG28P0DPA3 235 aa24.93■■□□□ 1.58
ATG4D-212ENST00000590096 FDX1P10109 184 aa24.93■■□□□ 1.58
ATG4D-212ENST00000590096 PRMT2P55345 433 aa24.93■■□□□ 1.58
ATG4D-212ENST00000590096 ADCK5Q3MIX3 580 aa24.93■■□□□ 1.58
ATG4D-212ENST00000590096 GPATCH4Q5T3I0 446 aaKnown RBP24.93■■□□□ 1.58
ATG4D-212ENST00000590096 FBXO46Q6PJ61 603 aaPredicted RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms