RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
SF3A2-205ENST00000590034 SLC39A5Q6ZMH5 540 aa16.78■□□□□ 0.28
SF3A2-205ENST00000590034 ABRAQ8N0Z2 381 aa16.78■□□□□ 0.28
SF3A2-205ENST00000590034 ARRDC4Q8NCT1 418 aa16.78■□□□□ 0.28
SF3A2-205ENST00000590034 HAUS7Q99871 368 aa16.78■□□□□ 0.28
SF3A2-205ENST00000590034 ADAMTS5Q9UNA0 930 aa16.78■□□□□ 0.28
SF3A2-205ENST00000590034 KBTBD13C9JR72 458 aa16.77■□□□□ 0.28
SF3A2-205ENST00000590034 HMMRO75330 724 aa16.77■□□□□ 0.28
SF3A2-205ENST00000590034 EEF2P13639 858 aaKnown RBP16.77■□□□□ 0.28
SF3A2-205ENST00000590034 LRRC41Q15345 812 aa16.77■□□□□ 0.28
SF3A2-205ENST00000590034 C16orf86Q6ZW13 317 aa16.77■□□□□ 0.28
SF3A2-205ENST00000590034 CCDC17Q96LX7 622 aa16.77■□□□□ 0.28
SF3A2-205ENST00000590034 RAB11FIP3O75154 756 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
SF3A2-205ENST00000590034 PGK2P07205 417 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 ADCYAP1R1P41586 468 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 C9orf50Q5SZB4 431 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 FAM109BQ6ICB4 259 aaPredicted RBP16.76■□□□□ 0.27
SF3A2-205ENST00000590034 SH3RF1Q7Z6J0 888 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 FERMT2Q96AC1 680 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 FAM161BQ96MY7 647 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.76■□□□□ 0.27
SF3A2-205ENST00000590034 SH2D4AQ9H788 454 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 PRDM5Q9NQX1 630 aaPredicted RBP16.76■□□□□ 0.27
SF3A2-205ENST00000590034 PDLIM7Q9NR12 457 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 PRKAG2Q9UGJ0 569 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 DDX19BQ9UMR2 479 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 VCANP13611 3396 aa16.76■□□□□ 0.27
SF3A2-205ENST00000590034 FCER1AP12319 257 aa16.75■□□□□ 0.27
SF3A2-205ENST00000590034 TAL1P17542 331 aaPredicted RBP16.75■□□□□ 0.27
SF3A2-205ENST00000590034 UBE3CQ15386 1083 aa16.75■□□□□ 0.27
SF3A2-205ENST00000590034 SHHQ15465 462 aa16.75■□□□□ 0.27
SF3A2-205ENST00000590034 CTR9Q6PD62 1173 aa16.75■□□□□ 0.27
SF3A2-205ENST00000590034 REPS2Q8NFH8 660 aa16.75■□□□□ 0.27
SF3A2-205ENST00000590034 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.75■□□□□ 0.271e-6■■□□□ 12.8
SF3A2-205ENST00000590034 PUS7LQ9H0K6 701 aaKnown RBP16.75■□□□□ 0.27
SF3A2-205ENST00000590034 SLC5A4Q9NY91 659 aa16.75■□□□□ 0.27
SF3A2-205ENST00000590034 ZNF214Q9UL59 606 aaPredicted RBP16.75■□□□□ 0.27
SF3A2-205ENST00000590034 SLC4A4Q9Y6R1 1079 aa16.75■□□□□ 0.27
SF3A2-205ENST00000590034 TRIM43BA6NCK2 446 aa16.74■□□□□ 0.27
SF3A2-205ENST00000590034 SLC25A27O95847 323 aa16.74■□□□□ 0.27
SF3A2-205ENST00000590034 MS4A1P11836 297 aa16.74■□□□□ 0.27
SF3A2-205ENST00000590034 C1orf53Q5VUE5 145 aa16.74■□□□□ 0.27
SF3A2-205ENST00000590034 RIOX2Q8IUF8 465 aa16.74■□□□□ 0.27
SF3A2-205ENST00000590034 BADQ92934 168 aa16.74■□□□□ 0.27
SF3A2-205ENST00000590034 TRIM43Q96BQ3 446 aaPredicted RBP16.74■□□□□ 0.27
SF3A2-205ENST00000590034 LENG1Q96BZ8 264 aaPredicted RBP16.74■□□□□ 0.27
SF3A2-205ENST00000590034 MMP19Q99542 508 aa16.74■□□□□ 0.27
SF3A2-205ENST00000590034 KANSL2Q9H9L4 492 aa16.74■□□□□ 0.27
SF3A2-205ENST00000590034 PPP1R9AQ9ULJ8 1098 aa16.74■□□□□ 0.27
SF3A2-205ENST00000590034 ROBO3Q96MS0 1386 aa16.74■□□□□ 0.27
SF3A2-205ENST00000590034 MYH4Q9Y623 1939 aa16.74■□□□□ 0.27
SF3A2-205ENST00000590034 PRUNE2Q8WUY3 3088 aa16.73■□□□□ 0.27
SF3A2-205ENST00000590034 VWA5AO00534 786 aa16.73■□□□□ 0.27
SF3A2-205ENST00000590034 ITGB8P26012 769 aa16.73■□□□□ 0.27
SF3A2-205ENST00000590034 ZNF792Q3KQV3 632 aa16.73■□□□□ 0.27
SF3A2-205ENST00000590034 FAM83BQ5T0W9 1011 aa16.73■□□□□ 0.27
SF3A2-205ENST00000590034 PHF24Q9UPV7 400 aa16.73■□□□□ 0.27
SF3A2-205ENST00000590034 MCM3APO60318 1980 aa16.73■□□□□ 0.27
SF3A2-205ENST00000590034 SMARCA5O60264 1052 aaPredicted RBP16.72■□□□□ 0.27
SF3A2-205ENST00000590034 PGK1P00558 417 aa16.72■□□□□ 0.27
SF3A2-205ENST00000590034 STAT3P40763 770 aa16.72■□□□□ 0.27
SF3A2-205ENST00000590034 AMOTL1Q8IY63 956 aa16.72■□□□□ 0.27
SF3A2-205ENST00000590034 NUP88Q99567 741 aaPredicted RBP16.72■□□□□ 0.27
SF3A2-205ENST00000590034 TINF2Q9BSI4 451 aa16.72■□□□□ 0.27
SF3A2-205ENST00000590034 XPNPEP3Q9NQH7 507 aa16.72■□□□□ 0.27
SF3A2-205ENST00000590034 NRBP1Q9UHY1 535 aa16.72■□□□□ 0.27
SF3A2-205ENST00000590034 ZNF865P0CJ78 1059 aaPredicted RBP16.71■□□□□ 0.27
SF3A2-205ENST00000590034 RARBP10826 455 aa16.71■□□□□ 0.27
SF3A2-205ENST00000590034 RASA1P20936 1047 aa16.71■□□□□ 0.27
SF3A2-205ENST00000590034 TLE2Q04725 743 aa16.71■□□□□ 0.27
SF3A2-205ENST00000590034 KCTD2Q14681 263 aa16.71■□□□□ 0.27
SF3A2-205ENST00000590034 ZNF697Q5TEC3 545 aa16.71■□□□□ 0.27
SF3A2-205ENST00000590034 GOPCQ9HD26 462 aa16.71■□□□□ 0.27
SF3A2-205ENST00000590034 ARPP21Q9UBL0 812 aaPredicted RBP16.71■□□□□ 0.27
SF3A2-205ENST00000590034 SPTBN5Q9NRC6 3674 aaKnown RBP16.71■□□□□ 0.26
SF3A2-205ENST00000590034 RAD21O60216 631 aa16.7■□□□□ 0.26
SF3A2-205ENST00000590034 EPHB4P54760 987 aa16.7■□□□□ 0.26
SF3A2-205ENST00000590034 C20orf194Q5TEA3 1177 aa16.7■□□□□ 0.26
SF3A2-205ENST00000590034 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.7■□□□□ 0.26
SF3A2-205ENST00000590034 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
SF3A2-205ENST00000590034 STRBPQ96SI9 672 aaKnown RBP16.7■□□□□ 0.26
SF3A2-205ENST00000590034 COL25A1Q9BXS0 654 aaPredicted RBP16.7■□□□□ 0.26
SF3A2-205ENST00000590034 LRRCC1Q9C099 1032 aa16.7■□□□□ 0.26
SF3A2-205ENST00000590034 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
SF3A2-205ENST00000590034 A0A1W2PQ45 241 aaPredicted RBP16.69■□□□□ 0.26
SF3A2-205ENST00000590034 A0A1W2PQY0 241 aa16.69■□□□□ 0.26
SF3A2-205ENST00000590034 GSG1L2A8MUP6 293 aa16.69■□□□□ 0.26
SF3A2-205ENST00000590034 ADAMTS4O75173 837 aa16.69■□□□□ 0.26
SF3A2-205ENST00000590034 STK11IPQ8N1F8 1099 aa16.69■□□□□ 0.26
SF3A2-205ENST00000590034 CDX2Q99626 313 aaPredicted RBP16.69■□□□□ 0.26
SF3A2-205ENST00000590034 TTYH1Q9H313 450 aaPredicted RBP16.69■□□□□ 0.26
SF3A2-205ENST00000590034 RIPK3Q9Y572 518 aa16.69■□□□□ 0.26
SF3A2-205ENST00000590034 NDUFB10O96000 172 aa16.68■□□□□ 0.26
SF3A2-205ENST00000590034 CLTBP09497 229 aa16.68■□□□□ 0.26
SF3A2-205ENST00000590034 AKR1A1P14550 325 aa16.68■□□□□ 0.26
SF3A2-205ENST00000590034 SBK1Q52WX2 424 aa16.68■□□□□ 0.26
SF3A2-205ENST00000590034 TSHZ3Q63HK5 1081 aa16.68■□□□□ 0.26
SF3A2-205ENST00000590034 ZSCAN25Q6NSZ9 544 aa16.68■□□□□ 0.26
SF3A2-205ENST00000590034 RNF180Q86T96 592 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms