RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 ECE1P42892 770 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 SLC1A4P43007 532 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 PFKFB3Q16875 520 aaPredicted RBP20.17■□□□□ 0.82
CXXC1-212ENST00000589940 CCDC96Q2M329 555 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 FOXD4L6Q3SYB3 417 aaPredicted RBP20.17■□□□□ 0.82
CXXC1-212ENST00000589940 FOXD4L3Q6VB84 417 aaPredicted RBP20.17■□□□□ 0.82
CXXC1-212ENST00000589940 USP48Q86UV5 1035 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 WRNIP1Q96S55 665 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 SH2D4AQ9H788 454 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 NDUFB10O96000 172 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 SCG2P13521 617 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 MYH6P13533 1939 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 XBP1P17861 261 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 CPVLQ9H3G5 476 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 GPCPD1Q9NPB8 672 aa20.17■□□□□ 0.82
CXXC1-212ENST00000589940 ATAD5Q96QE3 1844 aa20.16■□□□□ 0.82
CXXC1-212ENST00000589940 PIBF1Q8WXW3 757 aa20.16■□□□□ 0.82
CXXC1-212ENST00000589940 KLRG1Q96E93 195 aa20.16■□□□□ 0.82
CXXC1-212ENST00000589940 CHAMP1Q96JM3 812 aa20.16■□□□□ 0.82
CXXC1-212ENST00000589940 RIOX1Q9H6W3 641 aa20.16■□□□□ 0.82
CXXC1-212ENST00000589940 GOPCQ9HD26 462 aa20.16■□□□□ 0.82
CXXC1-212ENST00000589940 BAZ2BQ9UIF8 2168 aaKnown RBP20.16■□□□□ 0.82
CXXC1-212ENST00000589940 KCTD1Q719H9 257 aa20.15■□□□□ 0.82
CXXC1-212ENST00000589940 SCYL3Q8IZE3 742 aa20.15■□□□□ 0.82
CXXC1-212ENST00000589940 UBA5Q9GZZ9 404 aa20.15■□□□□ 0.82
CXXC1-212ENST00000589940 GOLGA6L22H0YM25 854 aa20.15■□□□□ 0.82
CXXC1-212ENST00000589940 DLK2Q6UY11 383 aa20.15■□□□□ 0.82
CXXC1-212ENST00000589940 FZD1Q9UP38 647 aa20.15■□□□□ 0.82
CXXC1-212ENST00000589940 DDX11L8A8MPP1 907 aa20.14■□□□□ 0.81
CXXC1-212ENST00000589940 KIF23Q02241 960 aaPredicted RBP20.14■□□□□ 0.81
CXXC1-212ENST00000589940 CCDC84Q86UT8 332 aaPredicted RBP20.14■□□□□ 0.81
CXXC1-212ENST00000589940 RRP36Q96EU6 259 aaKnown RBP20.14■□□□□ 0.81
CXXC1-212ENST00000589940 VPS54Q9P1Q0 977 aa20.14■□□□□ 0.81
CXXC1-212ENST00000589940 MMP1P03956 469 aa20.14■□□□□ 0.81
CXXC1-212ENST00000589940 TTBK2Q6IQ55 1244 aa20.14■□□□□ 0.81
CXXC1-212ENST00000589940 ZKSCAN4Q969J2 545 aaPredicted RBP20.14■□□□□ 0.81
CXXC1-212ENST00000589940 GLIS2Q9BZE0 524 aaPredicted RBP20.14■□□□□ 0.81
CXXC1-212ENST00000589940 VCPKMTQ9H867 229 aa20.14■□□□□ 0.81
CXXC1-212ENST00000589940 ISY1Q9ULR0 285 aaKnown RBP20.14■□□□□ 0.81
CXXC1-212ENST00000589940 KCNJ14Q9UNX9 436 aa20.14■□□□□ 0.81
CXXC1-212ENST00000589940 DOCK1Q14185 1865 aa20.13■□□□□ 0.81
CXXC1-212ENST00000589940 SAFBQ15424 915 aaKnown RBP eCLIP20.13■□□□□ 0.81
CXXC1-212ENST00000589940 SHISA4Q96DD7 197 aa20.13■□□□□ 0.81
CXXC1-212ENST00000589940 PICK1Q9NRD5 415 aa20.13■□□□□ 0.81
CXXC1-212ENST00000589940 SEC63Q9UGP8 760 aaKnown RBP20.13■□□□□ 0.81
CXXC1-212ENST00000589940 USP2O75604 605 aaPredicted RBP20.12■□□□□ 0.81
CXXC1-212ENST00000589940 BMP3P12645 472 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 DNM1Q05193 864 aaKnown RBP20.12■□□□□ 0.81
CXXC1-212ENST00000589940 FAM173BQ6P4H8 233 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 BRAPQ7Z569 592 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 SPICE1Q8N0Z3 855 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.12■□□□□ 0.813e-6■■■■□ 25.7
CXXC1-212ENST00000589940 CDCA5Q96FF9 252 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 VAT1LQ9HCJ6 419 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 PPP1R12BO60237 982 aaPredicted RBP20.12■□□□□ 0.81
CXXC1-212ENST00000589940 VEGFAP15692 232 aaPredicted RBP20.12■□□□□ 0.81
CXXC1-212ENST00000589940 NOL9Q5SY16 702 aaKnown RBP20.12■□□□□ 0.81
CXXC1-212ENST00000589940 HOMER1Q86YM7 354 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 ADGRF4Q8IZF3 695 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 PIGSQ96S52 555 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 NUP88Q99567 741 aaPredicted RBP20.12■□□□□ 0.81
CXXC1-212ENST00000589940 FEZ1Q99689 392 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 PHF20Q9BVI0 1012 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 SH3GLB2Q9NR46 395 aa20.12■□□□□ 0.81
CXXC1-212ENST00000589940 KIF28PB7ZC32 967 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 NF2P35240 595 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 SLC16A2P36021 539 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 PRKG1Q13976 671 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 NBR1Q14596 966 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 KIAA1755Q5JYT7 1200 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 JMJD4Q9H9V9 463 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 PTPRAP18433 802 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 U2AF2P26368 475 aaKnown RBP eCLIP20.11■□□□□ 0.816e-8■□□□□ 9.8
CXXC1-212ENST00000589940 DIS3L2Q8IYB7 885 aaKnown RBP20.11■□□□□ 0.81
CXXC1-212ENST00000589940 FAM177A1Q8N128 213 aaPredicted RBP20.11■□□□□ 0.81
CXXC1-212ENST00000589940 GPKOWQ92917 476 aaPredicted RBP eCLIP20.11■□□□□ 0.818e-6■■■□□ 18.6
CXXC1-212ENST00000589940 WDR18Q9BV38 432 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 KIAA1683Q9H0B3 1180 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 BARHL2Q9NY43 387 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 CLEC11AQ9Y240 323 aa20.11■□□□□ 0.81
CXXC1-212ENST00000589940 NCLP19338 710 aaKnown RBP20.1■□□□□ 0.81
CXXC1-212ENST00000589940 KRT85P78386 507 aa20.1■□□□□ 0.81
CXXC1-212ENST00000589940 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
CXXC1-212ENST00000589940 ZYXQ15942 572 aaKnown RBP20.1■□□□□ 0.81
CXXC1-212ENST00000589940 WWC2Q6AWC2 1192 aa20.1■□□□□ 0.81
CXXC1-212ENST00000589940 HEATR3Q7Z4Q2 680 aa20.1■□□□□ 0.81
CXXC1-212ENST00000589940 RRAGCQ9HB90 399 aa20.1■□□□□ 0.81
CXXC1-212ENST00000589940 AS3MTQ9HBK9 375 aa20.1■□□□□ 0.81
CXXC1-212ENST00000589940 CNPY2Q9Y2B0 182 aa20.1■□□□□ 0.81
CXXC1-212ENST00000589940 TMEM232C9JQI7 657 aa20.1■□□□□ 0.81
CXXC1-212ENST00000589940 POTEIP0CG38 1075 aa20.1■□□□□ 0.81
CXXC1-212ENST00000589940 POTEJP0CG39 1038 aa20.1■□□□□ 0.81
CXXC1-212ENST00000589940 MTMR8Q96EF0 704 aa20.1■□□□□ 0.81
CXXC1-212ENST00000589940 FOXP1Q9H334 677 aaPredicted RBP20.1■□□□□ 0.81
CXXC1-212ENST00000589940 PTMSP20962 102 aa20.09■□□□□ 0.81
CXXC1-212ENST00000589940 MAP3K9P80192 1104 aa20.09■□□□□ 0.81
CXXC1-212ENST00000589940 BTNL9Q6UXG8 535 aa20.09■□□□□ 0.81
CXXC1-212ENST00000589940 CCDC148Q8NFR7 591 aa20.09■□□□□ 0.81
CXXC1-212ENST00000589940 PNMA6FA0A0J9YX94 578 aa20.08■□□□□ 0.81
CXXC1-212ENST00000589940 BTBD18B2RXH4 712 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms