RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 OSBP2Q969R2 916 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 SENP6Q9GZR1 1112 aaPredicted RBP9.92□□□□□ -0.82
TPM4-211ENST00000589897 PORCNQ9H237 461 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 RWDD1Q9H446 243 aaPredicted RBP9.92□□□□□ -0.82
TPM4-211ENST00000589897 KANSL2Q9H9L4 492 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 GOPCQ9HD26 462 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 SYNGAP1Q96PV0 1343 aa9.91□□□□□ -0.82
TPM4-211ENST00000589897 A0A1W2PRG0 241 aa9.91□□□□□ -0.82
TPM4-211ENST00000589897 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
TPM4-211ENST00000589897 GSG1L2A8MUP6 293 aa9.91□□□□□ -0.82
TPM4-211ENST00000589897 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
TPM4-211ENST00000589897 TRIM32Q13049 653 aa9.91□□□□□ -0.82
TPM4-211ENST00000589897 SBK1Q52WX2 424 aa9.91□□□□□ -0.82
TPM4-211ENST00000589897 MB21D1Q8N884 522 aa9.91□□□□□ -0.82
TPM4-211ENST00000589897 OTUD7AQ8TE49 926 aaPredicted RBP9.91□□□□□ -0.82
TPM4-211ENST00000589897 ASB2Q96Q27 587 aa9.91□□□□□ -0.82
TPM4-211ENST00000589897 TMX2Q9Y320 296 aa9.91□□□□□ -0.82
TPM4-211ENST00000589897 SLC15A5A6NIM6 579 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 PATL2C9JE40 543 aaKnown RBP9.9□□□□□ -0.82
TPM4-211ENST00000589897 M0R2C6 588 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 WDR46O15213 610 aaKnown RBP9.9□□□□□ -0.82
TPM4-211ENST00000589897 EEF2P13639 858 aaKnown RBP9.9□□□□□ -0.82
TPM4-211ENST00000589897 MRPS5P82675 430 aaKnown RBP9.9□□□□□ -0.82
TPM4-211ENST00000589897 PDE4BQ07343 736 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 MAP2K5Q13163 448 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 HDAC1Q13547 482 aaPredicted RBP9.9□□□□□ -0.82
TPM4-211ENST00000589897 MFSD14CQ5VZR4 134 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 LBX2Q6XYB7 198 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 CLEC10AQ8IUN9 316 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 IFNL3Q8IZI9 196 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 PI4K2BQ8TCG2 481 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 TRIB2Q92519 343 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 APBA2Q99767 749 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 NAPBQ9H115 298 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 TTYH1Q9H313 450 aaPredicted RBP9.9□□□□□ -0.82
TPM4-211ENST00000589897 VCPKMTQ9H867 229 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 SLC5A4Q9NY91 659 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 BTBD7Q9P203 1132 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 HCN4Q9Y3Q4 1203 aa9.9□□□□□ -0.82
TPM4-211ENST00000589897 CTDP1Q9Y5B0 961 aaPredicted RBP9.9□□□□□ -0.82
TPM4-211ENST00000589897 VCANP13611 3396 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 TRIM6-TRIM34B2RNG4 842 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 SMIM22K7EJ46 135 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 MSCO60682 206 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 CNMDO75829 334 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 TSPY3P0CV98 308 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 TSPY8P0CW00 308 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 PTPREP23469 700 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 DSG3P32926 999 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 MORN1Q5T089 497 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 LHX8Q68G74 356 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 B4GALNT3Q6L9W6 998 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 DPP9Q86TI2 863 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 NCAPG2Q86XI2 1143 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 EVI5LQ96CN4 794 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 SPATC1LQ9H0A9 340 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 ISY1Q9ULR0 285 aaKnown RBP9.89□□□□□ -0.83
TPM4-211ENST00000589897 PLXNB2O15031 1838 aa9.89□□□□□ -0.83
TPM4-211ENST00000589897 STRNO43815 780 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 PRDM1O75626 825 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 RASA1P20936 1047 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 CNGA1P29973 690 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 PDE1AP54750 535 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 CACNB2Q08289 660 aaPredicted RBP9.88□□□□□ -0.83
TPM4-211ENST00000589897 CCL14Q16627 93 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 ZMYM1Q5SVZ6 1142 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 SIAH1Q8IUQ4 282 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 ADAMTS19Q8TE59 1207 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 ATG4CQ96DT6 458 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 UHRF1Q96T88 793 aaPredicted RBP9.88□□□□□ -0.83
TPM4-211ENST00000589897 SEC62Q99442 399 aaKnown RBP9.88□□□□□ -0.83
TPM4-211ENST00000589897 MOV10L1Q9BXT6 1211 aaKnown RBP9.88□□□□□ -0.83
TPM4-211ENST00000589897 LNPKQ9C0E8 428 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 MROH8Q9H579 483 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 CLIP2Q9UDT6 1046 aa9.88□□□□□ -0.83
TPM4-211ENST00000589897 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.87□□□□□ -0.83
TPM4-211ENST00000589897 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.87□□□□□ -0.83
TPM4-211ENST00000589897 SLC25A27O95847 323 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 FCER1AP12319 257 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 ERCC3P19447 782 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 PPARAQ07869 468 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 KIAA1755Q5JYT7 1200 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 FAM83BQ5T0W9 1011 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 POTEEQ6S8J3 1075 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 SHCBP1Q8NEM2 672 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 USP6NLQ92738 828 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 RILPL2Q969X0 211 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 GAS2L1Q99501 681 aaPredicted RBP9.87□□□□□ -0.83
TPM4-211ENST00000589897 EPB41L4AQ9HCS5 686 aaPredicted RBP9.87□□□□□ -0.83
TPM4-211ENST00000589897 NYAP2Q9P242 653 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 THEGQ9P2T0 379 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 ROBO3Q96MS0 1386 aa9.87□□□□□ -0.83
TPM4-211ENST00000589897 MYH4Q9Y623 1939 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 F5H6K3 240 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 DNM1LO00429 736 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 TTLL1O95922 423 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 ADORA2AP29274 412 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 SLC4A3P48751 1232 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 ATN1P54259 1190 aaPredicted RBP9.86□□□□□ -0.83
TPM4-211ENST00000589897 KLRC3Q07444 240 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms