RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 CARD6Q9BX69 1037 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.39■□□□□ 0.21
RETREG3-208ENST00000589797 SSR1P43307 286 aaKnown RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 PLCD1P51178 756 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 CYP4A11Q02928 519 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 FMR1NBQ8N0W7 255 aaPredicted RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 CCDC42Q96M95 316 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 LUC7LQ9NQ29 371 aaKnown RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 U2AF2P26368 475 aaKnown RBP eCLIP16.38■□□□□ 0.218e-7■■■■□ 26.3
RETREG3-208ENST00000589797 RNASE9P60153 205 aaKnown RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 DCAF17Q5H9S7 520 aaPredicted RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 TRERF1Q96PN7 1200 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 FAM207AQ9NSI2 230 aaPredicted RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 PP2D1A8MPX8 630 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 PPP1R12BO60237 982 aaPredicted RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 RBM6P78332 1123 aaKnown RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 GPSM2P81274 684 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 PRPF4BQ13523 1007 aaKnown RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 TNIP1Q15025 636 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 ELF2Q15723 593 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 CCDC144BQ3MJ40 725 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 CERKLQ49MI3 558 aaPredicted RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 NSUN4Q96CB9 384 aaKnown RBP16.38■□□□□ 0.21
RETREG3-208ENST00000589797 UBR1Q8IWV7 1749 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 BBOX1O75936 387 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 MIGA2Q7L4E1 593 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 CRACR2AQ9BSW2 395 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 SERPINB13Q9UIV8 391 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 HPS5Q9UPZ3 1129 aa16.38■□□□□ 0.21
RETREG3-208ENST00000589797 SORBS3O60504 671 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 USO1O60763 962 aaKnown RBP16.37■□□□□ 0.21
RETREG3-208ENST00000589797 GRIN1Q05586 938 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 UBE2SQ16763 222 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 SHC4Q6S5L8 630 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 KIAA1524Q8TCG1 905 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 PSTPIP2Q9H939 334 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 NCOA3Q9Y6Q9 1424 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 PPARDQ03181 441 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 DLGAP5Q15398 846 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 PRR16Q569H4 304 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 SPECC1LQ69YQ0 1117 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 KRT25Q7Z3Z0 450 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 ADGRA1Q86SQ6 560 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 NLRC4Q9NPP4 1024 aa16.37■□□□□ 0.21
RETREG3-208ENST00000589797 ZHX1Q9UKY1 873 aaPredicted RBP16.37■□□□□ 0.21
RETREG3-208ENST00000589797 ERMNQ8TAM6 284 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 TBCKQ8TEA7 893 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 MAN1B1Q9UKM7 699 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 PCDHA1Q9Y5I3 950 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 PHACTR2O75167 634 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 PPP6R2O75170 966 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 HSPA1LP34931 641 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 FAM114A1Q8IWE2 563 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 RDH13Q8NBN7 331 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 TMEM47Q9BQJ4 181 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 PLEKHA4Q9H4M7 779 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 DDAH1O94760 285 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 PDE6BP35913 854 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 LRRC41Q15345 812 aa16.36■□□□□ 0.21
RETREG3-208ENST00000589797 TBC1D10BQ4KMP7 808 aaPredicted RBP16.36■□□□□ 0.21
RETREG3-208ENST00000589797 ZNF215Q9UL58 517 aaPredicted RBP16.36■□□□□ 0.21
RETREG3-208ENST00000589797 C21orf2O43822 256 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 ERLIN1O75477 346 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 PRR29P0C7W0 189 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 BCL2L12Q9HB09 334 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 TMEM232C9JQI7 657 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 SEMA3EO15041 775 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 PTPROQ16827 1216 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 CCDC122Q5T0U0 273 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 NEK8Q86SG6 692 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 TAF4BQ92750 862 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 PCDHA12Q9UN75 941 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 TXNRD1Q16881 649 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 NSMFQ6X4W1 530 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
RETREG3-208ENST00000589797 MYRIPQ8NFW9 859 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 CEP95Q96GE4 821 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 MRFAP1L1Q96HT8 127 aa16.35■□□□□ 0.21
RETREG3-208ENST00000589797 USP17L5A8MUK1 530 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 ICA1Q05084 483 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 RAPGEF1Q13905 1077 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 NAA30Q147X3 362 aaPredicted RBP16.34■□□□□ 0.21
RETREG3-208ENST00000589797 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 TMTC3Q6ZXV5 915 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 PKNOX2Q96KN3 472 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 CGNQ9P2M7 1197 aaKnown RBP16.34■□□□□ 0.21
RETREG3-208ENST00000589797 SPATA31A5Q5VU36 1347 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 SPATA31A7Q8IWB4 1347 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 PRR5LQ6MZQ0 368 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 PDLIM2Q96JY6 352 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 PRPF3O43395 683 aaKnown RBP16.34■□□□□ 0.21
RETREG3-208ENST00000589797 BRIP1Q9BX63 1249 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 ACBD3Q9H3P7 528 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 MYCLP12524 364 aaPredicted RBP16.34■□□□□ 0.21
RETREG3-208ENST00000589797 ERCC6LQ2NKX8 1250 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 CSRNP1Q96S65 589 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 GDAQ9Y2T3 454 aa16.34■□□□□ 0.21
RETREG3-208ENST00000589797 OR52Z1P0C646 297 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms