RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	USP26	Q9BXU7	913 aa		14.02	□□□□□ -0.17
RFX2-215	ENST00000589742	HOXC10	Q9NYD6	342 aa		14.02	□□□□□ -0.17
RFX2-215	ENST00000589742	IFIT3	O14879	490 aa	Known RBP	14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	CNMD	O75829	334 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	BMP3	P12645	472 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	HSPA4	P34932	840 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	SLC1A4	P43007	532 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	PSMC4	P43686	418 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	NT5C2	P49902	561 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	FAM110C	Q1W6H9	321 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	CCDC96	Q2M329	555 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	ADCK5	Q3MIX3	580 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	KCTD1	Q719H9	257 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	ANKS1A	Q92625	1134 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	SENP2	Q9HC62	589 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	GPHN	Q9NQX3	736 aa	Predicted RBP	14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	BTBD7	Q9P203	1132 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	SYNPO2	Q9UMS6	1093 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	TRIM17	Q9Y577	477 aa		14.01	□□□□□ -0.17
RFX2-215	ENST00000589742	FRMPD2	Q68DX3	1309 aa	Predicted RBP	14	□□□□□ -0.17
RFX2-215	ENST00000589742	TMEM232	C9JQI7	657 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	FMNL1	O95466	1100 aa	Predicted RBP	14	□□□□□ -0.17
RFX2-215	ENST00000589742	SEC24B	O95487	1268 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	ZKSCAN1	P17029	563 aa	Predicted RBP	14	□□□□□ -0.17
RFX2-215	ENST00000589742	ERVK-9	P63128	1117 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	ERVK-24	P63145	666 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	KIF22	Q14807	665 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	SEC23A	Q15436	765 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	IFIT1B	Q5T764	474 aa	Known RBP	14	□□□□□ -0.17
RFX2-215	ENST00000589742	TTBK2	Q6IQ55	1244 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	CTU1	Q7Z7A3	348 aa	Known RBP	14	□□□□□ -0.17
RFX2-215	ENST00000589742	GPRC5A	Q8NFJ5	357 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	KCNB2	Q92953	911 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	KIFC2	Q96AC6	838 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	GMCL1	Q96IK5	515 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	LRRC2	Q9BYS8	371 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	KAT14	Q9H8E8	782 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	EFCC1	Q9HA90	598 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	MORF4L1	Q9UBU8	362 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	PPP1R9A	Q9ULJ8	1098 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	RABGAP1	Q9Y3P9	1069 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	SNX14	Q9Y5W7	946 aa		14	□□□□□ -0.17
RFX2-215	ENST00000589742	PRC1	O43663	620 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	PDHB	P11177	359 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	IK	Q13123	557 aa	Predicted RBP	13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	TSGA10IP	Q3SY00	556 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	TMEM67	Q5HYA8	995 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	LBX2	Q6XYB7	198 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	OTOP1	Q7RTM1	612 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	PNMA1	Q8ND90	353 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	IGDCC4	Q8TDY8	1250 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	TRIM47	Q96LD4	638 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	TCEANC2	Q96MN5	208 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	NEK1	Q96PY6	1258 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	SLF1	Q9BQI6	1058 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	PORCN	Q9H237	461 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	GPCPD1	Q9NPB8	672 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	FEM1B	Q9UK73	627 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	ZSWIM8	A7E2V4	1837 aa		13.99	□□□□□ -0.17
RFX2-215	ENST00000589742	RLF	Q13129	1914 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	ERICH2	A1L162	156 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	GOLGA8H	P0CJ92	632 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	CPA1	P15085	419 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	MCM5	P33992	734 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	SLC16A2	P36021	539 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	SNAP25	P60880	206 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	PLS1	Q14651	629 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	WTAP	Q15007	396 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	PRPF38A	Q8NAV1	312 aa	Known RBP	13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	DCAF4	Q8WV16	495 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	ADAMTS5	Q9UNA0	930 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	DOCK3	Q8IZD9	2030 aa		13.98	□□□□□ -0.17
RFX2-215	ENST00000589742	MYPN	Q86TC9	1320 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	VWA5A	O00534	786 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	TNPO2	O14787	897 aa	Known RBP	13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	SLC4A3	P48751	1232 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	STAT2	P52630	851 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	FCGRT	P55899	365 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	KRT32	Q14532	448 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	TMEM132B	Q14DG7	1078 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	SART3	Q15020	963 aa	Known RBP	13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	C8orf34	Q49A92	452 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	CHURC1	Q8WUH1	139 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	JAKMIP1	Q96N16	626 aa	Known RBP	13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	MCOLN1	Q9GZU1	580 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	SPATC1L	Q9H0A9	340 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	GABRQ	Q9UN88	632 aa		13.97	□□□□□ -0.17
RFX2-215	ENST00000589742	SH2B2	O14492	632 aa	Predicted RBP	13.96	□□□□□ -0.17
RFX2-215	ENST00000589742	EPB41L2	O43491	1005 aa	Known RBP	13.96	□□□□□ -0.17
RFX2-215	ENST00000589742	SNHG28	P0DPA3	235 aa		13.96	□□□□□ -0.17
RFX2-215	ENST00000589742	EXOSC10	Q01780	885 aa	Known RBP	13.96	□□□□□ -0.17
RFX2-215	ENST00000589742	ZNF543	Q08ER8	600 aa		13.96	□□□□□ -0.17
RFX2-215	ENST00000589742	ARHGEF6	Q15052	776 aa		13.96	□□□□□ -0.17
RFX2-215	ENST00000589742	WDR78	Q5VTH9	848 aa		13.96	□□□□□ -0.17
RFX2-215	ENST00000589742	FAM160B2	Q86V87	743 aa		13.96	□□□□□ -0.17
RFX2-215	ENST00000589742	CCAR1	Q8IX12	1150 aa	Known RBP	13.96	□□□□□ -0.17
RFX2-215	ENST00000589742	CPXCR1	Q8N123	301 aa		13.96	□□□□□ -0.17
RFX2-215	ENST00000589742	MB21D1	Q8N884	522 aa		13.96	□□□□□ -0.17
RFX2-215	ENST00000589742	REPS2	Q8NFH8	660 aa		13.96	□□□□□ -0.17

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