RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 VAT1LQ9HCJ6 419 aa12.5□□□□□ -0.41
GFAP-216ENST00000589701 CDC25BP30305 580 aa12.5□□□□□ -0.41
GFAP-216ENST00000589701 MYL5Q02045 173 aa12.5□□□□□ -0.41
GFAP-216ENST00000589701 IL17AQ16552 155 aa12.5□□□□□ -0.41
GFAP-216ENST00000589701 E4F1Q66K89 784 aaPredicted RBP12.5□□□□□ -0.41
GFAP-216ENST00000589701 HOMER1Q86YM7 354 aa12.5□□□□□ -0.41
GFAP-216ENST00000589701 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
GFAP-216ENST00000589701 NFE2L3Q9Y4A8 694 aa12.5□□□□□ -0.41
GFAP-216ENST00000589701 ACTN4O43707 911 aaKnown RBP12.49□□□□□ -0.41
GFAP-216ENST00000589701 CD44P16070 742 aaKnown RBP12.49□□□□□ -0.41
GFAP-216ENST00000589701 NBPF20Q3BBV1 942 aa12.49□□□□□ -0.41
GFAP-216ENST00000589701 RPGRQ92834 1020 aaKnown RBP12.49□□□□□ -0.41
GFAP-216ENST00000589701 PRIMPOLQ96LW4 560 aa12.49□□□□□ -0.41
GFAP-216ENST00000589701 UIMC1Q96RL1 719 aa12.49□□□□□ -0.41
GFAP-216ENST00000589701 FEZ2Q9UHY8 353 aaPredicted RBP12.49□□□□□ -0.41
GFAP-216ENST00000589701 PRPF3O43395 683 aaKnown RBP12.49□□□□□ -0.41
GFAP-216ENST00000589701 ADKP55263 362 aaKnown RBP12.49□□□□□ -0.41
GFAP-216ENST00000589701 PICALMQ13492 652 aa12.49□□□□□ -0.41
GFAP-216ENST00000589701 SLC15A2Q16348 729 aa12.49□□□□□ -0.41
GFAP-216ENST00000589701 CEP135Q66GS9 1140 aa12.49□□□□□ -0.41
GFAP-216ENST00000589701 PNMA1Q8ND90 353 aa12.49□□□□□ -0.41
GFAP-216ENST00000589701 LRRN4CLQ8ND94 238 aa12.49□□□□□ -0.41
GFAP-216ENST00000589701 SRPRBQ9Y5M8 271 aaKnown RBP12.49□□□□□ -0.41
GFAP-216ENST00000589701 IRS2Q9Y4H2 1338 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 C6orf229H3BNL8 230 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 SFPQP23246 707 aaKnown RBP eCLIP12.48□□□□□ -0.41
GFAP-216ENST00000589701 GRAPQ13588 217 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 GRAPLQ8TC17 118 aaPredicted RBP12.48□□□□□ -0.41
GFAP-216ENST00000589701 CEP83Q9Y592 693 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 CYTH3O43739 400 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 TSPY3P0CV98 308 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 TSPY8P0CW00 308 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 SCG2P13521 617 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 TTC38Q5R3I4 469 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 CCAR2Q8N163 923 aaKnown RBP12.48□□□□□ -0.41
GFAP-216ENST00000589701 SMARCE1Q969G3 411 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 KAT14Q9H8E8 782 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 EFCC1Q9HA90 598 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 POLLQ9UGP5 575 aa12.48□□□□□ -0.41
GFAP-216ENST00000589701 SLFN14P0C7P3 912 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 GYS1P13807 737 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 BTDP43251 543 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 PTPN14Q15678 1187 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 C12orf60Q5U649 245 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 USP17L2Q6R6M4 530 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 HEATR3Q7Z4Q2 680 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 ZNF526Q8TF50 670 aaPredicted RBP12.47□□□□□ -0.41
GFAP-216ENST00000589701 CPLX3Q8WVH0 158 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 CCDC66A2RUB6 948 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 SERPINB2P05120 415 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 FGRP09769 529 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 DPYDQ12882 1025 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 ATP8A2Q9NTI2 1148 aa12.47□□□□□ -0.41
GFAP-216ENST00000589701 MKRN1Q9UHC7 482 aaKnown RBP12.47□□□□□ -0.41
GFAP-216ENST00000589701 SMTNL1A8MU46 457 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 XBP1P17861 261 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 DDR1Q08345 913 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 MFSD14BQ5SR56 506 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 TNFRSF25Q93038 417 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 MYCBPQ99417 103 aaPredicted RBP12.46□□□□□ -0.41
GFAP-216ENST00000589701 BPIFA3Q9BQP9 254 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
GFAP-216ENST00000589701 FAM237AA0A1B0GTK4 181 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 TEX33O43247 280 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 SLC27A3Q5K4L6 730 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 SYT10Q6XYQ8 523 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 MTRQ99707 1265 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 UBA5Q9GZZ9 404 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 CD209Q9NNX6 404 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 ARPP21Q9UBL0 812 aaPredicted RBP12.46□□□□□ -0.41
GFAP-216ENST00000589701 NID2Q14112 1375 aa12.46□□□□□ -0.41
GFAP-216ENST00000589701 SEMA3EO15041 775 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 ORC4O43929 436 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 SCNN1DP51172 638 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 TPM4P67936 248 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 GTF2IP78347 998 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 SATB1Q01826 763 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 KARSQ15046 597 aaKnown RBP12.45□□□□□ -0.42
GFAP-216ENST00000589701 INF2Q27J81 1249 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 DNAJC21Q5F1R6 531 aaKnown RBP12.45□□□□□ -0.42
GFAP-216ENST00000589701 PAGE5Q96GU1 130 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 PPP1R13BQ96KQ4 1090 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 XDHP47989 1333 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 A0A0U1RQJ8 604 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 IKBKBO14920 756 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 FANCGO15287 622 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 NOP2P46087 812 aaKnown RBP12.45□□□□□ -0.42
GFAP-216ENST00000589701 DOK7Q18PE1 504 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 CEP120Q8N960 986 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 CCDC112Q8NEF3 446 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 ATRIPQ8WXE1 791 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 SGSM3Q96HU1 749 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 DESI2Q9BSY9 194 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 OSBPL5Q9H0X9 879 aaPredicted RBP12.45□□□□□ -0.42
GFAP-216ENST00000589701 TMEM60Q9H2L4 133 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 KCNQ5Q9NR82 932 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 MAD2L2Q9UI95 211 aa12.45□□□□□ -0.42
GFAP-216ENST00000589701 ZNF215Q9UL58 517 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms