RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ABCF2Q9UG63 623 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 TANC1Q9C0D5 1861 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 SIP14410 1827 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 MOXD2PA6NHM9 499 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 CCER2I3L3R5 266 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 CD4P01730 458 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 ALADP13716 330 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 IL9P15248 144 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 GRB10Q13322 594 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 KCNA10Q16322 511 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 CCDC102BQ68D86 513 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 ZGPATQ8N5A5 531 aaKnown RBP7.57□□□□□ -1.2
VPS25-204ENST00000589577 SHCBP1Q8NEM2 672 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.57□□□□□ -1.2
VPS25-204ENST00000589577 SH3RF3Q8TEJ3 882 aaPredicted RBP7.57□□□□□ -1.2
VPS25-204ENST00000589577 NUP133Q8WUM0 1156 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 SRCIN1Q9C0H9 1055 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 SPATC1LQ9H0A9 340 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 WNT8AQ9H1J5 351 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 MRS2Q9HD23 443 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 ALG13Q9NP73 1137 aaKnown RBP7.57□□□□□ -1.2
VPS25-204ENST00000589577 GNL3LQ9NVN8 582 aaKnown RBP7.57□□□□□ -1.2
VPS25-204ENST00000589577 NRBP1Q9UHY1 535 aa7.57□□□□□ -1.2
VPS25-204ENST00000589577 ATG2AQ2TAZ0 1938 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 ELP1O95163 1332 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 MROH7Q68CQ1 1323 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 FANCIQ9NVI1 1328 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 RIF1Q5UIP0 2472 aaKnown RBP7.56□□□□□ -1.2
VPS25-204ENST00000589577 PTPRZ1P23471 2315 aaPredicted RBP7.56□□□□□ -1.2
VPS25-204ENST00000589577 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.56□□□□□ -1.2
VPS25-204ENST00000589577 ADCY6O43306 1168 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 DCXO43602 365 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 GH2P01242 217 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 ATP2A2P16615 1042 aaKnown RBP7.56□□□□□ -1.2
VPS25-204ENST00000589577 SSTR3P32745 418 aaPredicted RBP7.56□□□□□ -1.2
VPS25-204ENST00000589577 TAP1Q03518 808 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 IER5LQ5T953 404 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 SAMD1Q6SPF0 538 aaPredicted RBP7.56□□□□□ -1.2
VPS25-204ENST00000589577 SLC4A10Q6U841 1118 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 SLF2Q8IX21 1173 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 TEX11Q8IYF3 940 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 ABRAQ8N0Z2 381 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 ACER1Q8TDN7 264 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 ARNTL2Q8WYA1 636 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 NSUN4Q96CB9 384 aaKnown RBP7.56□□□□□ -1.2
VPS25-204ENST00000589577 CDCA7LQ96GN5 454 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 KIAA1683Q9H0B3 1180 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 MTIF3Q9H2K0 278 aaKnown RBP7.56□□□□□ -1.2
VPS25-204ENST00000589577 RPAP3Q9H6T3 665 aaPredicted RBP7.56□□□□□ -1.2
VPS25-204ENST00000589577 UBE2ZQ9H832 354 aaPredicted RBP7.56□□□□□ -1.2
VPS25-204ENST00000589577 GINM1Q9NU53 330 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 SLC4A7Q9Y6M7 1214 aa7.56□□□□□ -1.2
VPS25-204ENST00000589577 TET1Q8NFU7 2136 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 FLT1P17948 1338 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 FAM186AA6NE01 2351 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 CACNA1GO43497 2377 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 BAHCC1Q9P281 2608 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 GVINP1Q7Z2Y8 2422 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 ARVCFO00192 962 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 GFRA3O60609 400 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 MAP4K4O95819 1239 aaPredicted RBP7.55□□□□□ -1.2
VPS25-204ENST00000589577 PGK2P07205 417 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 ASGR1P07306 291 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 AKR1A1P14550 325 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 CST5P28325 142 aaPredicted RBP7.55□□□□□ -1.2
VPS25-204ENST00000589577 CCL23P55773 120 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 TCF15Q12870 199 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 TTLL4Q14679 1199 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 LEXMQ3ZCV2 418 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 TMEM67Q5HYA8 995 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 PI16Q6UXB8 463 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 FEZ1Q99689 392 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 TINF2Q9BSI4 451 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 DHX36Q9H2U1 1008 aaKnown RBP7.55□□□□□ -1.2
VPS25-204ENST00000589577 HIPK3Q9H422 1215 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 PALD1Q9ULE6 856 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 ZNF292O60281 2723 aa7.55□□□□□ -1.2
VPS25-204ENST00000589577 COL4A6Q14031 1691 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 FRYLO94915 3013 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 A0A0U1RQG5 324 aaPredicted RBP7.54□□□□□ -1.2
VPS25-204ENST00000589577 CTAGE5O15320 804 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 ZNF792Q3KQV3 632 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 KIAA1755Q5JYT7 1200 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 SPTY2D1Q68D10 685 aaPredicted RBP7.54□□□□□ -1.2
VPS25-204ENST00000589577 TBC1D9Q6ZT07 1266 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 ERICH6Q7L0X2 663 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 FOXP4Q8IVH2 680 aaPredicted RBP7.54□□□□□ -1.2
VPS25-204ENST00000589577 MAPKAPK5Q8IW41 473 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 WWC1Q8IX03 1113 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 GDPD5Q8WTR4 605 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 GLT1D1Q96MS3 346 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 NOC4LQ9BVI4 516 aaKnown RBP7.54□□□□□ -1.2
VPS25-204ENST00000589577 SIL1Q9H173 461 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 MROH8Q9H579 483 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 SLC5A4Q9NY91 659 aa7.54□□□□□ -1.2
VPS25-204ENST00000589577 CHD6Q8TD26 2715 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 GRXCR2A6NFK2 248 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 ZBBXA8MT70 800 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 KRT37O76014 449 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 CIAO1O76071 339 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms