RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 USP17L17D6RBQ6 530 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 USP17L19D6RCP7 530 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 USP17L20D6RJB6 530 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 ZBTB43O43298 467 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 RAD21O60216 631 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 PLA2G6O60733 806 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 PDHBP11177 359 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 VCAM1P19320 739 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 KIF5BP33176 963 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 APOBRQ0VD83 1088 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 USP17L24Q0WX57 530 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 GRM1Q13255 1194 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 GPAT2Q6NUI2 795 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 APOA5Q6Q788 366 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 SPICE1Q8N0Z3 855 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 FANCBQ8NB91 859 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 LIMCH1Q9UPQ0 1083 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 PALM3A6NDB9 673 aaPredicted RBP14.2□□□□□ -0.14
DNMT1-218ENST00000589294 BTBD19C9JJ37 291 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 PARP1P09874 1014 aaKnown RBP14.2□□□□□ -0.14
DNMT1-218ENST00000589294 PDIA3P30101 505 aaKnown RBP14.2□□□□□ -0.14
DNMT1-218ENST00000589294 GNAQP50148 359 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 ZNF543Q08ER8 600 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 COG2Q14746 738 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 GRM4Q14833 912 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 ASPRV1Q53RT3 343 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 CATSPERGQ6ZRH7 1159 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 CTCFLQ8NI51 663 aaPredicted RBP14.2□□□□□ -0.14
DNMT1-218ENST00000589294 CHURC1Q8WUH1 139 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 CHMP4CQ96CF2 233 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 ZSCAN31Q96LW9 406 aaPredicted RBP14.2□□□□□ -0.14
DNMT1-218ENST00000589294 PTPN18Q99952 460 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 LZTS2Q9BRK4 669 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 RPAP3Q9H6T3 665 aaPredicted RBP14.2□□□□□ -0.14
DNMT1-218ENST00000589294 HOXC10Q9NYD6 342 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 FEM1BQ9UK73 627 aa14.2□□□□□ -0.14
DNMT1-218ENST00000589294 CCDC196A0A1B0GTZ2 297 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 AOC2O75106 756 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 ALDH1A1P00352 501 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 OSBPP22059 807 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 SMARCA1P28370 1054 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 DGKZQ13574 1117 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 FAM83BQ5T0W9 1011 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 TREML2Q5T2D2 321 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 BTNL9Q6UXG8 535 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 FAM160B2Q86V87 743 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 IFNL1Q8IU54 200 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 PRPF38AQ8NAV1 312 aaKnown RBP14.19□□□□□ -0.14
DNMT1-218ENST00000589294 NUP133Q8WUM0 1156 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 RBM28Q9NW13 759 aaKnown RBP14.19□□□□□ -0.14
DNMT1-218ENST00000589294 MAD2L2Q9UI95 211 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 PNMA3Q9UL41 463 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 MYH4Q9Y623 1939 aa14.19□□□□□ -0.14
DNMT1-218ENST00000589294 TMEM232C9JQI7 657 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 KLRF2D3W0D1 207 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 PDHXO00330 501 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 FDX1P10109 184 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 STAT2P52630 851 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 CCDC96Q2M329 555 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 KCTD1Q719H9 257 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 DNAJC5GQ8N7S2 189 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 ZIC5Q96T25 663 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 NUP88Q99567 741 aaPredicted RBP14.18□□□□□ -0.14
DNMT1-218ENST00000589294 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 TPCN1Q9ULQ1 816 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 NAP1L2Q9ULW6 460 aaPredicted RBP14.18□□□□□ -0.14
DNMT1-218ENST00000589294 HPS5Q9UPZ3 1129 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 MTMR7Q9Y216 660 aa14.18□□□□□ -0.14
DNMT1-218ENST00000589294 MYPNQ86TC9 1320 aa14.17□□□□□ -0.14
DNMT1-218ENST00000589294 GOLGA8BA8MQT2 603 aa14.17□□□□□ -0.14
DNMT1-218ENST00000589294 IGF2BP3O00425 579 aaKnown RBP eCLIP14.17□□□□□ -0.14
DNMT1-218ENST00000589294 DHX16O60231 1041 aaKnown RBP14.17□□□□□ -0.14
DNMT1-218ENST00000589294 PFKFB2O60825 505 aa14.17□□□□□ -0.14
DNMT1-218ENST00000589294 FLOT1O75955 427 aa14.17□□□□□ -0.14
DNMT1-218ENST00000589294 METAP2P50579 478 aaKnown RBP eCLIP14.17□□□□□ -0.14
DNMT1-218ENST00000589294 RTN1Q16799 776 aa14.17□□□□□ -0.14
DNMT1-218ENST00000589294 MICU3Q86XE3 530 aa14.17□□□□□ -0.14
DNMT1-218ENST00000589294 FAM43AQ8N2R8 423 aa14.17□□□□□ -0.14
DNMT1-218ENST00000589294 LARP6Q9BRS8 491 aaKnown RBP14.17□□□□□ -0.14
DNMT1-218ENST00000589294 MYL10Q9BUA6 226 aa14.17□□□□□ -0.14
DNMT1-218ENST00000589294 ASCC2Q9H1I8 757 aaPredicted RBP14.17□□□□□ -0.14
DNMT1-218ENST00000589294 SLKQ9H2G2 1235 aaPredicted RBP14.17□□□□□ -0.14
DNMT1-218ENST00000589294 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
DNMT1-218ENST00000589294 SH2B1Q9NRF2 756 aaPredicted RBP14.17□□□□□ -0.14
DNMT1-218ENST00000589294 NID2Q14112 1375 aa14.17□□□□□ -0.14
DNMT1-218ENST00000589294 GOLGA8AA7E2F4 631 aa14.16□□□□□ -0.14
DNMT1-218ENST00000589294 GOLGA8HP0CJ92 632 aa14.16□□□□□ -0.14
DNMT1-218ENST00000589294 DSG3P32926 999 aa14.16□□□□□ -0.14
DNMT1-218ENST00000589294 IRX3P78415 501 aaPredicted RBP14.16□□□□□ -0.14
DNMT1-218ENST00000589294 ME3Q16798 604 aa14.16□□□□□ -0.14
DNMT1-218ENST00000589294 TTBK2Q6IQ55 1244 aa14.16□□□□□ -0.14
DNMT1-218ENST00000589294 LBX2Q6XYB7 198 aa14.16□□□□□ -0.14
DNMT1-218ENST00000589294 STAG2Q8N3U4 1231 aa14.16□□□□□ -0.14
DNMT1-218ENST00000589294 GTF3C2Q8WUA4 911 aaPredicted RBP14.16□□□□□ -0.14
DNMT1-218ENST00000589294 SNX21Q969T3 373 aa14.16□□□□□ -0.14
DNMT1-218ENST00000589294 P2RX7Q99572 595 aaKnown RBP14.16□□□□□ -0.14
DNMT1-218ENST00000589294 SLF1Q9BQI6 1058 aa14.16□□□□□ -0.14
DNMT1-218ENST00000589294 FAM217BQ9NTX9 383 aaPredicted RBP14.16□□□□□ -0.14
DNMT1-218ENST00000589294 PPP1R9AQ9ULJ8 1098 aa14.16□□□□□ -0.14
DNMT1-218ENST00000589294 ISY1Q9ULR0 285 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms