RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 YEATS4O95619 227 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 RBM26Q5T8P6 1007 aaKnown RBP13.91□□□□□ -0.18
CCBE1-203ENST00000589116 DPY19L2Q6NUT2 758 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 CAVIN1Q6NZI2 390 aaKnown RBP13.91□□□□□ -0.18
CCBE1-203ENST00000589116 NOSTRINQ8IVI9 506 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 GPC2Q8N158 579 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 LRRC47Q8N1G4 583 aaKnown RBP13.91□□□□□ -0.18
CCBE1-203ENST00000589116 GZF1Q9H116 711 aaPredicted RBP13.91□□□□□ -0.18
CCBE1-203ENST00000589116 CABP5Q9NP86 173 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 VPS54Q9P1Q0 977 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 SHTN1A0MZ66 631 aa13.9□□□□□ -0.18
CCBE1-203ENST00000589116 GOLGA6L4A6NEF3 574 aa13.9□□□□□ -0.18
CCBE1-203ENST00000589116 NASPP49321 788 aaPredicted RBP13.9□□□□□ -0.18
CCBE1-203ENST00000589116 ICA1Q05084 483 aa13.9□□□□□ -0.18
CCBE1-203ENST00000589116 KIF4BQ2VIQ3 1234 aa13.9□□□□□ -0.18
CCBE1-203ENST00000589116 GPATCH4Q5T3I0 446 aaKnown RBP13.9□□□□□ -0.18
CCBE1-203ENST00000589116 KCNJ14Q9UNX9 436 aa13.9□□□□□ -0.18
CCBE1-203ENST00000589116 USP17L5A8MUK1 530 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 H7C1D1 291 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 CYTH3O43739 400 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 SLURP2P0DP57 97 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 CALML3P27482 149 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 KRT2P35908 639 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 VEGFBP49765 207 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 RGS19P49795 217 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 MAP3K10Q02779 954 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 USP17L2Q6R6M4 530 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 CLEC10AQ8IUN9 316 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 CCDC148Q8NFR7 591 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 KCNG4Q8TDN1 519 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 TMEM39BQ9GZU3 492 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 WBP1LQ9NX94 342 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 PGAP2Q9UHJ9 254 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 ISY1Q9ULR0 285 aaKnown RBP13.89□□□□□ -0.19
CCBE1-203ENST00000589116 MTMR7Q9Y216 660 aa13.89□□□□□ -0.19
CCBE1-203ENST00000589116 BAZ2BQ9UIF8 2168 aaKnown RBP13.89□□□□□ -0.19
CCBE1-203ENST00000589116 hCG_1642624A0A1W2PR95 340 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 BTBD18B2RXH4 712 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 hCG_1984214I3L0E3 225 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 HSPA8P11142 646 aaKnown RBP13.88□□□□□ -0.19
CCBE1-203ENST00000589116 EEF2P13639 858 aaKnown RBP13.88□□□□□ -0.19
CCBE1-203ENST00000589116 ZNF543Q08ER8 600 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 SEPT2Q15019 361 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 RILPL1Q5EBL4 403 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 ANO1Q5XXA6 986 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 ZNF713Q8N859 430 aaPredicted RBP13.88□□□□□ -0.19
CCBE1-203ENST00000589116 LINC00301Q8NCQ3 95 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 DCAF4Q8WV16 495 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 RRP36Q96EU6 259 aaKnown RBP13.88□□□□□ -0.19
CCBE1-203ENST00000589116 RIOX1Q9H6W3 641 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 POTECB2RU33 542 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 GDF11O95390 407 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 GH2P01242 217 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 GOLGA8HP0CJ92 632 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 ATP2B2Q01814 1243 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 CEBPZQ03701 1054 aaKnown RBP13.88□□□□□ -0.19
CCBE1-203ENST00000589116 RASA3Q14644 834 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 SLC35G1Q2M3R5 365 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 GALNT17Q6IS24 598 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 GMCL1P1Q8NEA9 526 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 CCDC12Q8WUD4 166 aaPredicted RBP13.88□□□□□ -0.19
CCBE1-203ENST00000589116 SHISA4Q96DD7 197 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 FTOQ9C0B1 505 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCBE1-203ENST00000589116 GPRC5DQ9NZD1 345 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 TMEM63CQ9P1W3 806 aa13.88□□□□□ -0.19
CCBE1-203ENST00000589116 SEC63Q9UGP8 760 aaKnown RBP13.88□□□□□ -0.19
CCBE1-203ENST00000589116 EGFRP00533 1210 aa13.87□□□□□ -0.19
CCBE1-203ENST00000589116 ZNF445P59923 1031 aa13.87□□□□□ -0.19
CCBE1-203ENST00000589116 STK38Q15208 465 aa13.87□□□□□ -0.19
CCBE1-203ENST00000589116 ZSCAN23Q3MJ62 389 aa13.87□□□□□ -0.19
CCBE1-203ENST00000589116 TBC1D10BQ4KMP7 808 aaPredicted RBP13.87□□□□□ -0.19
CCBE1-203ENST00000589116 SAMD7Q7Z3H4 446 aa13.87□□□□□ -0.19
CCBE1-203ENST00000589116 APOBEC3FQ8IUX4 373 aaKnown RBP13.87□□□□□ -0.19
CCBE1-203ENST00000589116 PGBD1Q96JS3 809 aa13.87□□□□□ -0.19
CCBE1-203ENST00000589116 BARHL2Q9NY43 387 aa13.87□□□□□ -0.19
CCBE1-203ENST00000589116 SPTLC2O15270 562 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 NLRP5P59047 1200 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 NPY5RQ15761 445 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 CCDC183Q5T5S1 534 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 RASGRP2Q7LDG7 609 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 DAGLBQ8NCG7 672 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 ARHGEF10LQ9HCE6 1279 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 GINM1Q9NU53 330 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 HACL1Q9UJ83 578 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 ZBTB21Q9ULJ3 1066 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 CLIC4Q9Y696 253 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 ATAD5Q96QE3 1844 aa13.86□□□□□ -0.19
CCBE1-203ENST00000589116 FRMPD2Q68DX3 1309 aaPredicted RBP13.86□□□□□ -0.19
CCBE1-203ENST00000589116 ME1P48163 572 aa13.85□□□□□ -0.19
CCBE1-203ENST00000589116 NR5A1Q13285 461 aa13.85□□□□□ -0.19
CCBE1-203ENST00000589116 RRP1BQ14684 758 aaKnown RBP13.85□□□□□ -0.19
CCBE1-203ENST00000589116 SLC39A14Q15043 492 aa13.85□□□□□ -0.19
CCBE1-203ENST00000589116 SF3A1Q15459 793 aaKnown RBP13.85□□□□□ -0.19
CCBE1-203ENST00000589116 CCDC96Q2M329 555 aa13.85□□□□□ -0.19
CCBE1-203ENST00000589116 SHROOM1Q2M3G4 852 aaPredicted RBP13.85□□□□□ -0.19
CCBE1-203ENST00000589116 SLFN13Q68D06 897 aa13.85□□□□□ -0.19
CCBE1-203ENST00000589116 WWC2Q6AWC2 1192 aa13.85□□□□□ -0.19
CCBE1-203ENST00000589116 SIAH1Q8IUQ4 282 aa13.85□□□□□ -0.19
CCBE1-203ENST00000589116 BICD2Q8TD16 824 aa13.85□□□□□ -0.19
CCBE1-203ENST00000589116 OXER1Q8TDS5 423 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms