RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CA12O43570 354 aa22.24■■□□□ 1.15
CLPTM1-209ENST00000588855 IRX3P78415 501 aaPredicted RBP22.24■■□□□ 1.15
CLPTM1-209ENST00000588855 CRHR2Q13324 411 aa22.24■■□□□ 1.15
CLPTM1-209ENST00000588855 RUFY3Q7L099 469 aa22.24■■□□□ 1.15
CLPTM1-209ENST00000588855 PARK7Q99497 189 aaKnown RBP22.24■■□□□ 1.15
CLPTM1-209ENST00000588855 BEGAINQ9BUH8 593 aa22.24■■□□□ 1.15
CLPTM1-209ENST00000588855 OSBPP22059 807 aa22.23■■□□□ 1.15
CLPTM1-209ENST00000588855 SLC1A4P43007 532 aa22.23■■□□□ 1.15
CLPTM1-209ENST00000588855 R3HDMLQ9H3Y0 253 aa22.23■■□□□ 1.15
CLPTM1-209ENST00000588855 SAGE1Q9NXZ1 904 aa22.23■■□□□ 1.15
CLPTM1-209ENST00000588855 ISY1Q9ULR0 285 aaKnown RBP22.23■■□□□ 1.15
CLPTM1-209ENST00000588855 A0A0G2JMZ2 1700 aa22.23■■□□□ 1.15
CLPTM1-209ENST00000588855 TBC1D8O95759 1140 aa22.22■■□□□ 1.15
CLPTM1-209ENST00000588855 PDHBP11177 359 aa22.22■■□□□ 1.15
CLPTM1-209ENST00000588855 BMP3P12645 472 aa22.22■■□□□ 1.15
CLPTM1-209ENST00000588855 LIFRP42702 1097 aa22.22■■□□□ 1.15
CLPTM1-209ENST00000588855 RBM25P49756 843 aaKnown RBP22.22■■□□□ 1.15
CLPTM1-209ENST00000588855 DCAF4Q8WV16 495 aa22.22■■□□□ 1.15
CLPTM1-209ENST00000588855 ZFYVE28Q9HCC9 887 aa22.22■■□□□ 1.15
CLPTM1-209ENST00000588855 FBXO28Q9NVF7 368 aa22.22■■□□□ 1.15
CLPTM1-209ENST00000588855 TSKSQ9UJT2 592 aa22.22■■□□□ 1.15
CLPTM1-209ENST00000588855 CYP46A1Q9Y6A2 500 aa22.22■■□□□ 1.15
CLPTM1-209ENST00000588855 ADGRA2Q96PE1 1338 aa22.22■■□□□ 1.15
CLPTM1-209ENST00000588855 SNHG28P0DPA3 235 aa22.21■■□□□ 1.15
CLPTM1-209ENST00000588855 CCDC96Q2M329 555 aa22.21■■□□□ 1.15
CLPTM1-209ENST00000588855 Q6ZUG5 572 aa22.21■■□□□ 1.15
CLPTM1-209ENST00000588855 KCTD1Q719H9 257 aa22.21■■□□□ 1.15
CLPTM1-209ENST00000588855 P2RX7Q99572 595 aaKnown RBP22.21■■□□□ 1.15
CLPTM1-209ENST00000588855 CFHR5Q9BXR6 569 aa22.21■■□□□ 1.15
CLPTM1-209ENST00000588855 COL11A1P12107 1806 aaPredicted RBP22.21■■□□□ 1.15
CLPTM1-209ENST00000588855 FLOT1O75955 427 aa22.21■■□□□ 1.15
CLPTM1-209ENST00000588855 HERVK_113P62684 666 aa22.21■■□□□ 1.15
CLPTM1-209ENST00000588855 NFXL1Q6ZNB6 911 aa22.21■■□□□ 1.15
CLPTM1-209ENST00000588855 SMCR8Q8TEV9 937 aaPredicted RBP22.21■■□□□ 1.15
CLPTM1-209ENST00000588855 FRMPD2Q68DX3 1309 aaPredicted RBP22.2■■□□□ 1.15
CLPTM1-209ENST00000588855 CCDC69A6NI79 296 aa22.2■■□□□ 1.14
CLPTM1-209ENST00000588855 SPDYE16A6NNV3 312 aaPredicted RBP22.2■■□□□ 1.14
CLPTM1-209ENST00000588855 HSPA1AP0DMV8 641 aaKnown RBP22.2■■□□□ 1.14
CLPTM1-209ENST00000588855 HSPA1BP0DMV9 641 aaKnown RBP22.2■■□□□ 1.14
CLPTM1-209ENST00000588855 FGD1P98174 961 aa22.2■■□□□ 1.14
CLPTM1-209ENST00000588855 SAMD1Q6SPF0 538 aaPredicted RBP22.2■■□□□ 1.14
CLPTM1-209ENST00000588855 SGMS1Q86VZ5 419 aa22.2■■□□□ 1.14
CLPTM1-209ENST00000588855 ZNF654Q8IZM8 581 aa22.2■■□□□ 1.14
CLPTM1-209ENST00000588855 KIF2CQ99661 725 aa22.2■■□□□ 1.14
CLPTM1-209ENST00000588855 MYL10Q9BUA6 226 aa22.2■■□□□ 1.14
CLPTM1-209ENST00000588855 TMEM232C9JQI7 657 aa22.19■■□□□ 1.14
CLPTM1-209ENST00000588855 TLR2O60603 784 aa22.19■■□□□ 1.14
CLPTM1-209ENST00000588855 GOLGA8HP0CJ92 632 aa22.19■■□□□ 1.14
CLPTM1-209ENST00000588855 ZNF543Q08ER8 600 aa22.19■■□□□ 1.14
CLPTM1-209ENST00000588855 CATIPQ7Z7H3 387 aa22.19■■□□□ 1.14
CLPTM1-209ENST00000588855 TMTC2Q8N394 836 aa22.19■■□□□ 1.14
CLPTM1-209ENST00000588855 TBC1D32Q96NH3 1257 aa22.19■■□□□ 1.14
CLPTM1-209ENST00000588855 TROAPQ12815 778 aa22.18■■□□□ 1.14
CLPTM1-209ENST00000588855 COG2Q14746 738 aa22.18■■□□□ 1.14
CLPTM1-209ENST00000588855 POTEEQ6S8J3 1075 aa22.18■■□□□ 1.14
CLPTM1-209ENST00000588855 BRF1Q92994 677 aa22.18■■□□□ 1.14
CLPTM1-209ENST00000588855 AGXT2Q9BYV1 514 aa22.18■■□□□ 1.14
CLPTM1-209ENST00000588855 GPCPD1Q9NPB8 672 aa22.18■■□□□ 1.14
CLPTM1-209ENST00000588855 CPA4Q9UI42 421 aa22.18■■□□□ 1.14
CLPTM1-209ENST00000588855 FEM1BQ9UK73 627 aa22.18■■□□□ 1.14
CLPTM1-209ENST00000588855 PPP1R9AQ9ULJ8 1098 aa22.18■■□□□ 1.14
CLPTM1-209ENST00000588855 FOXN1O15353 648 aa22.17■■□□□ 1.14
CLPTM1-209ENST00000588855 DSG3P32926 999 aa22.17■■□□□ 1.14
CLPTM1-209ENST00000588855 STAT2P52630 851 aa22.17■■□□□ 1.14
CLPTM1-209ENST00000588855 TTBK2Q6IQ55 1244 aa22.17■■□□□ 1.14
CLPTM1-209ENST00000588855 MYPNQ86TC9 1320 aa22.17■■□□□ 1.14
CLPTM1-209ENST00000588855 RAB11FIP4Q86YS3 637 aa22.17■■□□□ 1.14
CLPTM1-209ENST00000588855 ATG4CQ96DT6 458 aa22.17■■□□□ 1.14
CLPTM1-209ENST00000588855 SLF1Q9BQI6 1058 aa22.17■■□□□ 1.14
CLPTM1-209ENST00000588855 PDRG1Q9NUG6 133 aa22.17■■□□□ 1.14
CLPTM1-209ENST00000588855 BRPF3Q9ULD4 1205 aa22.17■■□□□ 1.14
CLPTM1-209ENST00000588855 PEX10O60683 326 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 DDAH1O94760 285 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 PARP1P09874 1014 aaKnown RBP22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 RXRAP19793 462 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 APOBRQ0VD83 1088 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 IKQ13123 557 aaPredicted RBP22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 TOB2Q14106 344 aaPredicted RBP22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 GRM4Q14833 912 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 APOA5Q6Q788 366 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 C17orf99Q6UX52 265 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 FBXL16Q8N461 479 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 NUP133Q8WUM0 1156 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 KIFC2Q96AC6 838 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 HOXC10Q9NYD6 342 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 SLC12A7Q9Y666 1083 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 KLF18A0A0U1RQI7 1052 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 BCRP11274 1271 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 SLC16A2P36021 539 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 ASPRV1Q53RT3 343 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 GPATCH4Q5T3I0 446 aaKnown RBP22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 LBX2Q6XYB7 198 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 FAM160B2Q86V87 743 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 ANKRD13CQ8N6S4 541 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 TXNRD2Q9NNW7 524 aa22.16■■□□□ 1.14
CLPTM1-209ENST00000588855 ZSWIM8A7E2V4 1837 aa22.15■■□□□ 1.14
CLPTM1-209ENST00000588855 PLA2G6O60733 806 aa22.15■■□□□ 1.14
CLPTM1-209ENST00000588855 GCLCP48506 637 aaPredicted RBP22.15■■□□□ 1.14
CLPTM1-209ENST00000588855 MICU3Q86XE3 530 aa22.15■■□□□ 1.14
CLPTM1-209ENST00000588855 STAG2Q8N3U4 1231 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms