RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 FLOT1O75955 427 aa16.69■□□□□ 0.26
CLPTM1-208ENST00000588274 MBD4O95243 580 aa16.69■□□□□ 0.26
CLPTM1-208ENST00000588274 EPHB4P54760 987 aa16.69■□□□□ 0.26
CLPTM1-208ENST00000588274 C12orf60Q5U649 245 aa16.69■□□□□ 0.26
CLPTM1-208ENST00000588274 C16orf86Q6ZW13 317 aa16.69■□□□□ 0.26
CLPTM1-208ENST00000588274 DNAJC2Q99543 621 aaKnown RBP16.69■□□□□ 0.26
CLPTM1-208ENST00000588274 CDX2Q99626 313 aaPredicted RBP16.69■□□□□ 0.26
CLPTM1-208ENST00000588274 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLPTM1-208ENST00000588274 FBXO28Q9NVF7 368 aa16.69■□□□□ 0.26
CLPTM1-208ENST00000588274 CHD9Q3L8U1 2897 aa16.69■□□□□ 0.26
CLPTM1-208ENST00000588274 MYH7P12883 1935 aa16.68■□□□□ 0.26
CLPTM1-208ENST00000588274 ZNFX1Q9P2E3 1918 aaKnown RBP16.68■□□□□ 0.26
CLPTM1-208ENST00000588274 TAL1P17542 331 aaPredicted RBP16.68■□□□□ 0.26
CLPTM1-208ENST00000588274 ZNF792Q3KQV3 632 aa16.68■□□□□ 0.26
CLPTM1-208ENST00000588274 ZNF697Q5TEC3 545 aa16.68■□□□□ 0.26
CLPTM1-208ENST00000588274 NCAPG2Q86XI2 1143 aa16.68■□□□□ 0.26
CLPTM1-208ENST00000588274 LENG1Q96BZ8 264 aaPredicted RBP16.68■□□□□ 0.26
CLPTM1-208ENST00000588274 NRBP1Q9UHY1 535 aa16.68■□□□□ 0.26
CLPTM1-208ENST00000588274 ADAMTS4O75173 837 aa16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 PGK2P07205 417 aa16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 ZNF865P0CJ78 1059 aaPredicted RBP16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 CDK8P49336 464 aa16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 SMAD3P84022 425 aaKnown RBP16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 HSP90AB4PQ58FF6 505 aa16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 RIOX2Q8IUF8 465 aa16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 FERMT2Q96AC1 680 aa16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 KIF1BPQ96EK5 621 aa16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 SEMA6BQ9H3T3 888 aa16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 PRDM5Q9NQX1 630 aaPredicted RBP16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 ATP8A2Q9NTI2 1148 aa16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 PRKAG2Q9UGJ0 569 aa16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 SMCHD1A6NHR9 2005 aa16.67■□□□□ 0.26
CLPTM1-208ENST00000588274 VWA5AO00534 786 aa16.66■□□□□ 0.26
CLPTM1-208ENST00000588274 FCER1AP12319 257 aa16.66■□□□□ 0.26
CLPTM1-208ENST00000588274 EEF2P13639 858 aaKnown RBP16.66■□□□□ 0.26
CLPTM1-208ENST00000588274 TLE2Q04725 743 aa16.66■□□□□ 0.26
CLPTM1-208ENST00000588274 PLS1Q14651 629 aa16.66■□□□□ 0.26
CLPTM1-208ENST00000588274 CLASRPQ8N2M8 674 aaKnown RBP16.66■□□□□ 0.26
CLPTM1-208ENST00000588274 ARHGEF10LQ9HCE6 1279 aa16.66■□□□□ 0.26
CLPTM1-208ENST00000588274 XPNPEP3Q9NQH7 507 aa16.66■□□□□ 0.26
CLPTM1-208ENST00000588274 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
CLPTM1-208ENST00000588274 PPP1R9AQ9ULJ8 1098 aa16.66■□□□□ 0.26
CLPTM1-208ENST00000588274 USP17L12C9JPN9 530 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 USP17L21D6R901 530 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 SLC25A27O95847 323 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 PGK1P00558 417 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 ATP5JP18859 108 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 HAUS7Q99871 368 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 TINF2Q9BSI4 451 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 SH2D4AQ9H788 454 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 ZBTB40Q9NUA8 1239 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 SLC5A4Q9NY91 659 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 DIS3Q9Y2L1 958 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 TTC28Q96AY4 2481 aa16.65■□□□□ 0.26
CLPTM1-208ENST00000588274 A0A1W2PQ45 241 aaPredicted RBP16.64■□□□□ 0.25
CLPTM1-208ENST00000588274 A0A1W2PQY0 241 aa16.64■□□□□ 0.25
CLPTM1-208ENST00000588274 APBB1O00213 710 aa16.64■□□□□ 0.25
CLPTM1-208ENST00000588274 KIAA0355O15063 1070 aa16.64■□□□□ 0.25
CLPTM1-208ENST00000588274 UBE3CQ15386 1083 aa16.64■□□□□ 0.25
CLPTM1-208ENST00000588274 CCSAPQ6IQ19 270 aaPredicted RBP16.64■□□□□ 0.25
CLPTM1-208ENST00000588274 CTR9Q6PD62 1173 aa16.64■□□□□ 0.25
CLPTM1-208ENST00000588274 MYLIPQ8WY64 445 aa16.64■□□□□ 0.25
CLPTM1-208ENST00000588274 MMP19Q99542 508 aa16.64■□□□□ 0.25
CLPTM1-208ENST00000588274 BOLA2Q9H3K6 86 aa16.64■□□□□ 0.25
CLPTM1-208ENST00000588274 CHD7Q9P2D1 2997 aa16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 DNAJC25-GNG10A0A024R161 153 aa16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 ADCY6O43306 1168 aa16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 CLTBP09497 229 aa16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 IFIT2P09913 472 aaKnown RBP16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 RARBP10826 455 aa16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 FAM83BQ5T0W9 1011 aa16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 RPAP2Q8IXW5 612 aaPredicted RBP16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 MAFAQ8NHW3 353 aaPredicted RBP16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 FGD4Q96M96 766 aa16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 PUS7LQ9H0K6 701 aaKnown RBP16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 SYNRGQ9UMZ2 1314 aa16.63■□□□□ 0.25
CLPTM1-208ENST00000588274 STAT3P40763 770 aa16.62■□□□□ 0.25
CLPTM1-208ENST00000588274 ANKRD33Q7Z3H0 272 aa16.62■□□□□ 0.25
CLPTM1-208ENST00000588274 KANSL2Q9H9L4 492 aa16.62■□□□□ 0.25
CLPTM1-208ENST00000588274 RIPK3Q9Y572 518 aa16.62■□□□□ 0.25
CLPTM1-208ENST00000588274 TMEM265A0A087WTH1 108 aa16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 MYADML2A6NDP7 307 aa16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 SNAI1O95863 264 aaPredicted RBP16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 AKR1A1P14550 325 aa16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 RASA1P20936 1047 aa16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 IRX5P78411 483 aaPredicted RBP16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 FAAP100Q0VG06 881 aa16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 KLHDC9Q8NEP7 349 aa16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 NUP88Q99567 741 aaPredicted RBP16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 TACC3Q9Y6A5 838 aa16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 LRRC37A2A6NM11 1700 aa16.61■□□□□ 0.25
CLPTM1-208ENST00000588274 IGKV6D-41A0A0C4DH26 115 aa16.6■□□□□ 0.25
CLPTM1-208ENST00000588274 RAB11FIP3O75154 756 aa16.6■□□□□ 0.25
CLPTM1-208ENST00000588274 ACLYP53396 1101 aa16.6■□□□□ 0.25
CLPTM1-208ENST00000588274 KCTD2Q14681 263 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms