RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 USP17L21D6R901 530 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 USP17L18D6R9N7 530 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 USP17L22D6RA61 530 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 USP17L17D6RBQ6 530 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 USP17L19D6RCP7 530 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 USP17L20D6RJB6 530 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 MAPK4P31152 587 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 NT5C2P49902 561 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 USP17L24Q0WX57 530 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 LBX2Q6XYB7 198 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 PLEKHH3Q7Z736 793 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 SOCS4Q8WXH5 440 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 FEZ1Q99689 392 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 GDF15Q99988 308 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 RABGAP1Q9Y3P9 1069 aa17.63■□□□□ 0.41
HDAC5-207ENST00000588261 CYP2D7A0A087X1C5 515 aa17.62■□□□□ 0.41
HDAC5-207ENST00000588261 FGAP02671 866 aa17.62■□□□□ 0.41
HDAC5-207ENST00000588261 C7orf61Q8IZ16 206 aa17.62■□□□□ 0.41
HDAC5-207ENST00000588261 MAP4K1Q92918 833 aa17.62■□□□□ 0.41
HDAC5-207ENST00000588261 LRCH3Q96II8 777 aa17.62■□□□□ 0.41
HDAC5-207ENST00000588261 LSG1Q9H089 658 aaKnown RBP17.62■□□□□ 0.41
HDAC5-207ENST00000588261 RPAP3Q9H6T3 665 aaPredicted RBP17.62■□□□□ 0.41
HDAC5-207ENST00000588261 SWAP70Q9UH65 585 aa17.62■□□□□ 0.41
HDAC5-207ENST00000588261 ANAPC4Q9UJX5 808 aa17.62■□□□□ 0.41
HDAC5-207ENST00000588261 U3KPZ7 1027 aaPredicted RBP17.62■□□□□ 0.41
HDAC5-207ENST00000588261 CUL9Q8IWT3 2517 aa17.62■□□□□ 0.41
HDAC5-207ENST00000588261 A0A0G2JMZ2 1700 aa17.61■□□□□ 0.41
HDAC5-207ENST00000588261 SLC3A2P08195 630 aaKnown RBP17.61■□□□□ 0.41
HDAC5-207ENST00000588261 PCP11498 1178 aaKnown RBP17.61■□□□□ 0.41
HDAC5-207ENST00000588261 COL6A1P12109 1028 aa17.61■□□□□ 0.41
HDAC5-207ENST00000588261 TRMT44Q8IYL2 757 aaKnown RBP17.61■□□□□ 0.41
HDAC5-207ENST00000588261 NPLOC4Q8TAT6 608 aa17.61■□□□□ 0.41
HDAC5-207ENST00000588261 APBA2Q99767 749 aa17.61■□□□□ 0.41
HDAC5-207ENST00000588261 C11orf49Q9H6J7 331 aa17.61■□□□□ 0.41
HDAC5-207ENST00000588261 ZNF287Q9HBT7 754 aa17.61■□□□□ 0.41
HDAC5-207ENST00000588261 ANO2Q9NQ90 1003 aa17.61■□□□□ 0.41
HDAC5-207ENST00000588261 AKR1B1P15121 316 aa17.6■□□□□ 0.41
HDAC5-207ENST00000588261 ZKSCAN1P17029 563 aaPredicted RBP17.6■□□□□ 0.41
HDAC5-207ENST00000588261 RGS2P41220 211 aa17.6■□□□□ 0.41
HDAC5-207ENST00000588261 PPARAQ07869 468 aa17.6■□□□□ 0.41
HDAC5-207ENST00000588261 MAP2K5Q13163 448 aa17.6■□□□□ 0.41
HDAC5-207ENST00000588261 C16orf86Q6ZW13 317 aa17.6■□□□□ 0.41
HDAC5-207ENST00000588261 TRPV1Q8NER1 839 aa17.6■□□□□ 0.41
HDAC5-207ENST00000588261 GTF3C2Q8WUA4 911 aaPredicted RBP17.6■□□□□ 0.41
HDAC5-207ENST00000588261 ZMYND8Q9ULU4 1186 aaPredicted RBP17.6■□□□□ 0.41
HDAC5-207ENST00000588261 PTPREP23469 700 aa17.59■□□□□ 0.41
HDAC5-207ENST00000588261 USP14P54578 494 aa17.59■□□□□ 0.41
HDAC5-207ENST00000588261 PTH1RQ03431 593 aa17.59■□□□□ 0.41
HDAC5-207ENST00000588261 GRB14Q14449 540 aa17.59■□□□□ 0.41
HDAC5-207ENST00000588261 IMMTQ16891 758 aaKnown RBP17.59■□□□□ 0.41
HDAC5-207ENST00000588261 LRIT3Q3SXY7 679 aa17.59■□□□□ 0.41
HDAC5-207ENST00000588261 CABP5Q9NP86 173 aa17.59■□□□□ 0.41
HDAC5-207ENST00000588261 MYH8P13535 1937 aa17.59■□□□□ 0.41
HDAC5-207ENST00000588261 FRMPD3Q5JV73 1810 aa17.58■□□□□ 0.41
HDAC5-207ENST00000588261 PDE4BQ07343 736 aa17.58■□□□□ 0.4
HDAC5-207ENST00000588261 C8orf34Q49A92 452 aa17.58■□□□□ 0.4
HDAC5-207ENST00000588261 CCAR1Q8IX12 1150 aaKnown RBP17.58■□□□□ 0.4
HDAC5-207ENST00000588261 DEFB123Q8N688 67 aa17.58■□□□□ 0.4
HDAC5-207ENST00000588261 RNF41Q9H4P4 317 aaPredicted RBP17.58■□□□□ 0.4
HDAC5-207ENST00000588261 MINDY4BA8MYZ0 360 aa17.57■□□□□ 0.4
HDAC5-207ENST00000588261 ZNF213O14771 459 aa17.57■□□□□ 0.4
HDAC5-207ENST00000588261 HOXC6P09630 235 aa17.57■□□□□ 0.4
HDAC5-207ENST00000588261 FGRP09769 529 aa17.57■□□□□ 0.4
HDAC5-207ENST00000588261 SYN1P17600 705 aa17.57■□□□□ 0.4
HDAC5-207ENST00000588261 TDHQ8IZJ6 230 aa17.57■□□□□ 0.4
HDAC5-207ENST00000588261 MOV10L1Q9BXT6 1211 aaKnown RBP17.57■□□□□ 0.4
HDAC5-207ENST00000588261 RBM8AQ9Y5S9 174 aaKnown RBP17.57■□□□□ 0.4
HDAC5-207ENST00000588261 PARP14Q460N5 1801 aa17.56■□□□□ 0.4
HDAC5-207ENST00000588261 SLC15A5A6NIM6 579 aa17.56■□□□□ 0.4
HDAC5-207ENST00000588261 MPHOSPH10O00566 681 aaKnown RBP17.56■□□□□ 0.4
HDAC5-207ENST00000588261 LRRC26Q2I0M4 334 aa17.56■□□□□ 0.4
HDAC5-207ENST00000588261 RNF20Q5VTR2 975 aa17.56■□□□□ 0.4
HDAC5-207ENST00000588261 STAG1Q8WVM7 1258 aa17.56■□□□□ 0.4
HDAC5-207ENST00000588261 CCDC17Q96LX7 622 aa17.56■□□□□ 0.4
HDAC5-207ENST00000588261 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.56■□□□□ 0.4
HDAC5-207ENST00000588261 UBE2OQ9C0C9 1292 aaKnown RBP17.56■□□□□ 0.4
HDAC5-207ENST00000588261 ORC4O43929 436 aa17.55■□□□□ 0.4
HDAC5-207ENST00000588261 COBLO75128 1261 aa17.55■□□□□ 0.4
HDAC5-207ENST00000588261 CYP2C19P33261 490 aa17.55■□□□□ 0.4
HDAC5-207ENST00000588261 MAGEA10P43363 369 aaPredicted RBP17.55■□□□□ 0.4
HDAC5-207ENST00000588261 CDK8P49336 464 aa17.55■□□□□ 0.4
HDAC5-207ENST00000588261 NECTIN1Q15223 517 aa17.55■□□□□ 0.4
HDAC5-207ENST00000588261 WDR78Q5VTH9 848 aa17.55■□□□□ 0.4
HDAC5-207ENST00000588261 TMEM179Q6ZVK1 233 aa17.55■□□□□ 0.4
HDAC5-207ENST00000588261 SPICE1Q8N0Z3 855 aa17.55■□□□□ 0.4
HDAC5-207ENST00000588261 STXBP5LQ9Y2K9 1186 aa17.55■□□□□ 0.4
HDAC5-207ENST00000588261 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.55■□□□□ 0.4
HDAC5-207ENST00000588261 TMX2Q9Y320 296 aa17.55■□□□□ 0.4
HDAC5-207ENST00000588261 ZNF236Q9UL36 1845 aa17.55■□□□□ 0.4
HDAC5-207ENST00000588261 PLIN4Q96Q06 1357 aa17.54■□□□□ 0.4
HDAC5-207ENST00000588261 CCNA1P78396 465 aa17.54■□□□□ 0.4
HDAC5-207ENST00000588261 COG2Q14746 738 aa17.54■□□□□ 0.4
HDAC5-207ENST00000588261 AKNAD1Q5T1N1 836 aa17.54■□□□□ 0.4
HDAC5-207ENST00000588261 ATG4CQ96DT6 458 aa17.54■□□□□ 0.4
HDAC5-207ENST00000588261 GREB1LQ9C091 1923 aaPredicted RBP17.53■□□□□ 0.4
HDAC5-207ENST00000588261 CYP21A2P08686 494 aa17.53■□□□□ 0.4
HDAC5-207ENST00000588261 CYBAP13498 195 aa17.53■□□□□ 0.4
HDAC5-207ENST00000588261 ERCC3P19447 782 aa17.53■□□□□ 0.4
HDAC5-207ENST00000588261 DSG3P32926 999 aa17.53■□□□□ 0.4
HDAC5-207ENST00000588261 HSPA4P34932 840 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms