RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 AUHQ13825 339 aaKnown RBP7.57□□□□□ -1.2
TUBD1-208ENST00000588009 ANKRD34AQ69YU3 496 aa7.57□□□□□ -1.2
TUBD1-208ENST00000588009 BVESQ8NE79 360 aa7.57□□□□□ -1.2
TUBD1-208ENST00000588009 OSBP2Q969R2 916 aa7.57□□□□□ -1.2
TUBD1-208ENST00000588009 VWCEQ96DN2 955 aa7.57□□□□□ -1.2
TUBD1-208ENST00000588009 MRGPRX3Q96LB0 322 aa7.57□□□□□ -1.2
TUBD1-208ENST00000588009 KREMEN1Q96MU8 473 aa7.57□□□□□ -1.2
TUBD1-208ENST00000588009 PLVAPQ9BX97 442 aa7.57□□□□□ -1.2
TUBD1-208ENST00000588009 FAM126AQ9BYI3 521 aaPredicted RBP7.57□□□□□ -1.2
TUBD1-208ENST00000588009 HOMER2Q9NSB8 354 aa7.57□□□□□ -1.2
TUBD1-208ENST00000588009 SUGT1Q9Y2Z0 365 aa7.57□□□□□ -1.2
TUBD1-208ENST00000588009 DNAJC25-GNG10A0A024R161 153 aa7.56□□□□□ -1.2
TUBD1-208ENST00000588009 KRBA1A5PL33 1030 aa7.56□□□□□ -1.2
TUBD1-208ENST00000588009 GSG1L2A8MUP6 293 aa7.56□□□□□ -1.2
TUBD1-208ENST00000588009 S100BP04271 92 aaPredicted RBP7.56□□□□□ -1.2
TUBD1-208ENST00000588009 SOX5P35711 763 aa7.56□□□□□ -1.2
TUBD1-208ENST00000588009 CDKN1CP49918 316 aaPredicted RBP7.56□□□□□ -1.2
TUBD1-208ENST00000588009 LINC00114Q6XXX2 140 aa7.56□□□□□ -1.2
TUBD1-208ENST00000588009 FERMT3Q86UX7 667 aa7.56□□□□□ -1.2
TUBD1-208ENST00000588009 TMEM130Q8N3G9 435 aa7.56□□□□□ -1.2
TUBD1-208ENST00000588009 RCC1LQ96I51 464 aaKnown RBP7.56□□□□□ -1.2
TUBD1-208ENST00000588009 SPOCK3Q9BQ16 436 aa7.56□□□□□ -1.2
TUBD1-208ENST00000588009 MAPRE3Q9UPY8 281 aa7.56□□□□□ -1.2
TUBD1-208ENST00000588009 AKT3Q9Y243 479 aa7.56□□□□□ -1.2
TUBD1-208ENST00000588009 EMC9Q9Y3B6 208 aa7.56□□□□□ -1.2
TUBD1-208ENST00000588009 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.55□□□□□ -1.2
TUBD1-208ENST00000588009 SHOXO15266 292 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 TBX1O43435 398 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 ELNP15502 786 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 SDSP20132 328 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 EVA1CP58658 441 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 RNF4P78317 190 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 NFKB2Q00653 900 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 CT47A1Q5JQC4 288 aaPredicted RBP7.55□□□□□ -1.2
TUBD1-208ENST00000588009 LETMD1Q6P1Q0 360 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 RNF180Q86T96 592 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 DDX42Q86XP3 938 aaKnown RBP eCLIP7.55□□□□□ -1.2
TUBD1-208ENST00000588009 TRIM59Q8IWR1 403 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 ARHGEF39Q8N4T4 335 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 UBR7Q8N806 425 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 IER2Q9BTL4 223 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 GP6Q9HCN6 339 aa7.55□□□□□ -1.2
TUBD1-208ENST00000588009 G3BP2Q9UN86 482 aaKnown RBP7.55□□□□□ -1.2
TUBD1-208ENST00000588009 A0A087WZG4 1122 aa7.54□□□□□ -1.2
TUBD1-208ENST00000588009 F8W735 103 aaPredicted RBP7.54□□□□□ -1.2
TUBD1-208ENST00000588009 FAM229AH3BQW9 127 aa7.54□□□□□ -1.2
TUBD1-208ENST00000588009 ITGA4P13612 1032 aa7.54□□□□□ -1.2
TUBD1-208ENST00000588009 CNNM4Q6P4Q7 775 aa7.54□□□□□ -1.2
TUBD1-208ENST00000588009 POMZP3Q6PJE2 187 aa7.54□□□□□ -1.2
TUBD1-208ENST00000588009 CDH24Q86UP0 819 aa7.54□□□□□ -1.2
TUBD1-208ENST00000588009 LRRTM3Q86VH5 581 aa7.54□□□□□ -1.2
TUBD1-208ENST00000588009 AGGF1Q8N302 714 aaeCLIP7.54□□□□□ -1.24e-12■■■■□ 25.9
TUBD1-208ENST00000588009 ADCY4Q8NFM4 1077 aa7.54□□□□□ -1.2
TUBD1-208ENST00000588009 RIN3Q8TB24 985 aa7.54□□□□□ -1.2
TUBD1-208ENST00000588009 FBXL18Q96ME1 805 aa7.54□□□□□ -1.2
TUBD1-208ENST00000588009 ACSS3Q9H6R3 686 aa7.54□□□□□ -1.2
TUBD1-208ENST00000588009 INTS7Q9NVH2 962 aaKnown RBP7.54□□□□□ -1.2
TUBD1-208ENST00000588009 MAGEC2Q9UBF1 373 aaPredicted RBP7.54□□□□□ -1.2
TUBD1-208ENST00000588009 ZNF445P59923 1031 aa7.53□□□□□ -1.2
TUBD1-208ENST00000588009 SNRPNP63162 240 aaKnown RBP7.53□□□□□ -1.2
TUBD1-208ENST00000588009 MAP7Q14244 749 aa7.53□□□□□ -1.2
TUBD1-208ENST00000588009 TRIM61Q5EBN2 209 aa7.53□□□□□ -1.2
TUBD1-208ENST00000588009 CRACR2BQ8N4Y2 399 aaPredicted RBP7.53□□□□□ -1.2
TUBD1-208ENST00000588009 MIPEPQ99797 713 aa7.53□□□□□ -1.2
TUBD1-208ENST00000588009 TARS2Q9BW92 718 aaKnown RBP7.53□□□□□ -1.2
TUBD1-208ENST00000588009 CHPF2Q9P2E5 772 aa7.53□□□□□ -1.2
TUBD1-208ENST00000588009 FBXL21Q9UKT6 434 aa7.53□□□□□ -1.2
TUBD1-208ENST00000588009 DLX3O60479 287 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 ADAM23O75077 832 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 SLITRK5O94991 958 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 C6orf222P0C671 652 aaPredicted RBP7.52□□□□□ -1.21
TUBD1-208ENST00000588009 RAB6AP20340 208 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 ETV3P41162 512 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 PREPP48147 710 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 USP11P51784 963 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 NBPF9Q3BBW0 867 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 NOL9Q5SY16 702 aaKnown RBP7.52□□□□□ -1.21
TUBD1-208ENST00000588009 CCDC181Q5TID7 509 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 SLC7A14Q8TBB6 771 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 RNF141Q8WVD5 230 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 BTN2A2Q8WVV5 523 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 DDX1Q92499 740 aaKnown RBP7.52□□□□□ -1.21
TUBD1-208ENST00000588009 CEP89Q96ST8 783 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 ASPNQ9BXN1 380 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 TRIM39Q9HCM9 518 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 CGGBP1Q9UFW8 167 aaPredicted RBP7.52□□□□□ -1.21
TUBD1-208ENST00000588009 SFMBT1Q9UHJ3 866 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 MCM8Q9UJA3 840 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 DIS3Q9Y2L1 958 aaKnown RBP7.52□□□□□ -1.21
TUBD1-208ENST00000588009 PCDHB12Q9Y5F1 795 aa7.52□□□□□ -1.21
TUBD1-208ENST00000588009 GNB5O14775 395 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 SART1O43290 800 aaKnown RBP7.51□□□□□ -1.21
TUBD1-208ENST00000588009 DNAJC8O75937 253 aaPredicted RBP7.51□□□□□ -1.21
TUBD1-208ENST00000588009 ALX3O95076 343 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 KCNH1O95259 989 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 PMLP29590 882 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 BRDTQ58F21 947 aaPredicted RBP7.51□□□□□ -1.21
TUBD1-208ENST00000588009 GTF2IRD2BQ6EKJ0 949 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 CDPF1Q6NVV7 123 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 SHISA2Q6UWI4 295 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms